BAC Information

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BAC

Clone NameB6Ng01-197G09
Chromosome18 (Build37)
Map Location 48,348,822 - 48,349,989
singlet/doubletsinglet
Overlap genenone
Upstream geneSema6a, LOC628477, 9130209A04Rik, A730092B10, LOC383325, LOC100042982, LOC100042284, LOC100042301, EG433182, LOC383326
Downstream geneLOC100042323, LOC545470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197G09.bB6Ng01-197G09.g
ACCGA019273GA019274
length1,170285
definitionB6Ng01-197G09.b B6Ng01-197G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcttagtatgttacctagtctgtgatactgtattataccagc
agaacatggactgaaatagtatacacactcaggttatgtcactacaaata
cacaaagaaagcataactggcaaattgatcacacttcagttctttactag
aagcaataaagtccattaaaagtacagctgattctctttattcagcatac
ctatcagaggtatttctgcttagaaaatccaccagtctgagagaatgtgc
ctgtgtataagaccagcttctggggctgtattctggcttactccattctt
gttctaggatctagagcaaagaactttgtaatgagccaggttctatattg
tatataagcggacctatttgtagtcttgatggttaacattcattttaatt
aaataacataaaaaccataaaagttaaatacagcatgtggcacaatggtg
tctctttaaatatttattatcattgccacctgaaaacactaccattttag
acataggagattttccaattttattcagtgttgaaaataatgagatagct
actcataaatatgtttttcatacatgtgtgtatctataatattatttctt
agaagtgttaaaatataaaaaatatcttttgtgatttgattgctagtgct
gaatttctcacagaaaaggttctcttctatttatattacacacacattgt
tagcttcccacagccttgccagtgctagctattattagttttcatttagt
cttgccattttggcagacaacataaaagttcatttttaacacttgtgttt
tcctgattaatagtgacactgagaagcttgaatgatctacatttattctt
aaattacttaaccctatgcagcacctctattctagcaaaggatatcacct
gtgtatgtacatgctcaagtgtatgtatgtgcaagctgcatgtgtgctca
aaggtatatgtgtattccaggtaatgagcacacaggtatattgtagaggc
cagaagctgatattcaggtgtcttccttcattgcctttcattgtatttta
aagacatggtctttcactatccctggagttcccagtttcgtagacctgct
ggttacccggatcttgagatcccctgtctctgcctgctatcccatagaat
tcaaacacaatactggcata

ccaagacctctcaaacactggaataccaaccaagcagcatacaccagttg
ttatgaggcccccagcagaggaatgccgggtctgggttcagtcagcgaag
atgcacctaatcctcaagagactggaggccggagggagtttagaggtctc
gttgggtgggtggtgggtggtggggactccttgtggaggcaggggcttgg
ggagaagatatgggacgtggacagtcagagggtgggggattttatatctg
gtgttttttatttttttaaaattaaaaaggacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_48348822_48349989
seq2: B6Ng01-197G09.b_44_1213 (reverse)

seq1  TATGCCAGTA-TGTGCTTAGAATCTTAGGACTAAGCAGGCAGAGACAGGG  49
      |||||||||| |||| || ||||  || |    |||||||||||||||||
seq2  TATGCCAGTATTGTG-TTTGAATTCTATGGGATAGCAGGCAGAGACAGGG  49

seq1  GA-CTCAAGGATCCGGGTAACCAGCCAGTCTAACGAAACTGGGAACTCCA  98
      || ||||| ||||||||||||||||  |||| ||||||||||||||||||
seq2  GATCTCAA-GATCCGGGTAACCAGCAGGTCT-ACGAAACTGGGAACTCCA  97

seq1  GGATTAGTGAAAGACCATGTCTT--AAATACAATGGAAAGCAATGGAGGA  146
      ||  |||||||||||||||||||  |||||||||| || |||||| ||||
seq2  GGGATAGTGAAAGACCATGTCTTTAAAATACAATGAAAGGCAATGAAGGA  147

seq1  AGACACCTG-ATATCAGCTTCTGGCCTCTACAATATACCTGTGTGCTCAT  195
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTGAATATCAGCTTCTGGCCTCTACAATATACCTGTGTGCTCAT  197

seq1  TACCTGG-ATACACATATACCTTTGAGCACACATGCAGCTTGCACATACA  244
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGAATACACATATACCTTTGAGCACACATGCAGCTTGCACATACA  247

seq1  TACACTTGAGCATGTACATACACAGGTGATATTCCTTTGCTAGAATAGAG  294
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TACACTTGAGCATGTACATACACAGGTGATA-TCCTTTGCTAGAATAGAG  296

seq1  GTGCTGCATAGGGTTAAGTAATTTAAGAATAAATGTAGATCATTCAAGCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCATAGGGTTAAGTAATTTAAGAATAAATGTAGATCATTCAAGCT  346

seq1  TCTCAGTGTCACTATTAATCAGGAAAACACAAGTGTTAAAAATGAACTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGTCACTATTAATCAGGAAAACACAAGTGTTAAAAATGAACTTT  396

seq1  TATGTTGTCTGCCAAAATGGCAAGACTAAATGAAAACTAATAATAGCTAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTCTGCCAAAATGGCAAGACTAAATGAAAACTAATAATAGCTAG  446

seq1  CACTGGCAAGGCTGTGGGAAGCTAACAATGTGTGTGTAATATAAATAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCAAGGCTGTGGGAAGCTAACAATGTGTGTGTAATATAAATAGAA  496

seq1  GAGAACCTTTTCTGTGAGAAATTCAGCACTAGCAATCAAATCACAAAAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTTTTCTGTGAGAAATTCAGCACTAGCAATCAAATCACAAAAGA  546

seq1  TATTTTTTATATTTTAACACTTCTAAGAAATAATATTATAGATACACACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTATATTTTAACACTTCTAAGAAATAATATTATAGATACACACA  596

seq1  TGTATGAAAAACATATTTATGAGTAGCTATCTCATTATTTTCAACACTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAAAACATATTTATGAGTAGCTATCTCATTATTTTCAACACTGA  646

seq1  ATAAAATTGGAAAATCTCCTATGTCTAAAATGGTAGTGTTTTCAGGTGGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTGGAAAATCTCCTATGTCTAAAATGGTAGTGTTTTCAGGTGGC  696

seq1  AATGATAATAAATATTTAAAGAGACACCATTGTGCCACATGCTGTATTTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAATAAATATTTAAAGAGACACCATTGTGCCACATGCTGTATTTA  746

seq1  ACTTTTATGGTTTTTATGTTATTTAATTAAAATGAATGTTAACCATCAAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATGGTTTTTATGTTATTTAATTAAAATGAATGTTAACCATCAAG  796

seq1  ACTACAAATAGGTCCGCTTATATACAATATAGAACCTGGCTCATTACAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAATAGGTCCGCTTATATACAATATAGAACCTGGCTCATTACAAA  846

seq1  GTTCTTTGCTCTAGATCCTAGAACAAGAATGGAGTAAGCCAGAATACAGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGCTCTAGATCCTAGAACAAGAATGGAGTAAGCCAGAATACAGC  896

seq1  CCCAGAAGCTGGTCTTATACACAGGCACATTCTCTCAGACTGGTGGATTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGCTGGTCTTATACACAGGCACATTCTCTCAGACTGGTGGATTT  946

seq1  TCTAAGCAGAAATACCTCTGATAGGTATGCTGAATAAAGAGAATCAGCTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAGAAATACCTCTGATAGGTATGCTGAATAAAGAGAATCAGCTG  996

seq1  TACTTTTAATGGACTTTATTGCTTCTAGTAAAGAACTGAAGTGTGATCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTAATGGACTTTATTGCTTCTAGTAAAGAACTGAAGTGTGATCAA  1046

seq1  TTTGCCAGTTATGCTTTCTTTGTGTATTTGTAGTGACATAACCTGAGTGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGTTATGCTTTCTTTGTGTATTTGTAGTGACATAACCTGAGTGT  1096

seq1  GTATACTATTTCAGTCCATGTTCTGCTGGTATAATACAGTATCACAGACT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTATTTCAGTCCATGTTCTGCTGGTATAATACAGTATCACAGACT  1146

seq1  AGGTAACATACTAAGCAAGAATTC  1168
      ||||||||||||||||||||||||
seq2  AGGTAACATACTAAGCAAGAATTC  1170


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