BAC Information

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BAC

Clone NameB6Ng01-197M24
Chromosome18 (Build37)
Map Location 7,641,948 - 7,773,278
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562
Downstream geneLOC100039606, Wac, LOC665121, LOC225134, LOC665132, EG433158, EG545242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197M24.bB6Ng01-197M24.g
ACCGA019582GA019583
length957997
definitionB6Ng01-197M24.b B6Ng01-197M24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,641,948 - 7,642,893)(7,772,711 - 7,773,278)
sequence
gaattcagagatctacctgctttcttagtgctggagttaaaggtatatac
cactacatgcagttaaacatccagatctttatagagcttttaagaactac
tggtctcaacaatacacataaaactgcagtttgtattcactccatgcagc
agtatgtggaggggttgtgtccatacttggtatctttctgtgttttgtag
gctgtgttcactctaaagttctgattcagtggttgcccttataatgttct
attgtattgggttgaacaattttcttctacagtattctattgtcttaagg
gtacagtgtatggttgttatcacagtgttcaaaagacgcagggggtttgc
aagtttaatgtcagtctcacatcaataaacatgttttacttacaaaagca
ataatttctcatgtttattctcatattatactagccaaagagaagtttga
gtaatctgatctttatttttaagatgtagaggtatttcttttacaatgtt
atgtatatatatatatacacacaaaggaatccataaagaaaaatgaaatt
gtgttgtttgtaggaaaatgggtgaaatgcagatggtgatgctagataaa
ataggtcacacaaggaaagacaaatctaacatttttttctcctacatgga
atctattttttcaaaaatgatatgaaaggaaaagggcactaatgacaaga
aggggggagaagagggactagagagcataaaaagggatgactataatccc
aaacatgctgtgtgcctatgtgcaagtgtcataaaaaaaaaaacaattat
ttttatacaactaatgtgtggggaaaggtgttttaaatgggcctgcgttt
tctttacatattaataataatatctaaagacatttgtgaatactttatta
cccacacactggaaaatctgatactgctggatgtaattaatttctcacat
tcaattt

gaattcaaaacctggtaaaatctgtttctgtctatcattgggactttgac
aacgtgtaaagtctggtgggaactcttggtaagggggacaagttgggagt
actttacgcagtgtagaactggatcctgtaagattattagactaagaagg
aactgtgcaattatggaacataattaaggtacatgaagtggagaagaata
cagggaaaactgaggaattgctatgaactggcataggaacgggccatgtt
ctagctatggcccatagagggacagcatcactcggtatcacgagcttcag
gattatcaggaaccacagcatcttctttatctcttgtctcagccggggga
agcaatttttgtgtcagcctttctggtacccaaatcggatgttctttatc
cggtggaaaaacacaaacagctctcctagatctcgaaataacggaatctg
ggccataccatttaccagtttggacatccttccatttaacatttaccaag
ggcatagctgtatcagggtctccaaaaattctagtagctgcctcaacaag
gtgtgctacaaaatctgaaaatggctctgtgggaccctgcaagattttcg
taagattgcctgagactgcgcctttgtttggcaatgccttccaggctttg
gtagctacctcatttatttgggcatagactgcttcaggataatttgtctg
atctaatgcaaagcgccccagacccaggagcatatctgcatcccaatgtc
tctggggatcttgtcctgtggctaaatttgctgctgcctgactgtttgca
tattcataggacaaggacctccagtctaaatactgtctggacgacaaaca
agcccaagtaatattattccagtcccccggggtgaggcaatatctagcaa
gcaccttcgacctgtgcaacttacaaagctgcacttcaccccgtaggtac
ggactgactcagccagttgcttgatggttttaaaatctaattggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7641948_7642893
seq2: B6Ng01-197M24.b_48_1004

seq1  GAATTCAGAGATCTACCTGCTTTCTTAGTGCTGGAGTTAAAGGTATATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATCTACCTGCTTTCTTAGTGCTGGAGTTAAAGGTATATAC  50

seq1  CACTACATGCAGTTAAACATCCAGATCTTTATAGAGCTTTTAAGAACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATGCAGTTAAACATCCAGATCTTTATAGAGCTTTTAAGAACTAC  100

seq1  TGGTCTCAACAATACACATAAAACTGCAGTTTGTATTCACTCCATGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCAACAATACACATAAAACTGCAGTTTGTATTCACTCCATGCAGC  150

seq1  AGTATGTGGAGGGGTTGTGTCCATACTTGGTATCTTTCTGTGTTTTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTGGAGGGGTTGTGTCCATACTTGGTATCTTTCTGTGTTTTGTAG  200

seq1  GCTGTGTTCACTCTAAAGTTCTGATTCAGTGGTTGCCCTTATAATGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTTCACTCTAAAGTTCTGATTCAGTGGTTGCCCTTATAATGTTCT  250

seq1  ATTGTATTGGGTTGAACAATTTTCTTCTACAGTATTCTATTGTCTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTGGGTTGAACAATTTTCTTCTACAGTATTCTATTGTCTTAAGG  300

seq1  GTACAGTGTATGGTTGTTATCACAGTGTTCAAAAGACGCAGGGGGTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGTATGGTTGTTATCACAGTGTTCAAAAGACGCAGGGGGTTTGC  350

seq1  AAGTTTAATGTCAGTCTCACATCAATAAACATGTTTTACTTACAAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAATGTCAGTCTCACATCAATAAACATGTTTTACTTACAAAAGCA  400

seq1  ATAATTTCTCATGTTTATTCTCATATTATACTAGCCAAAGAGAAGTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTCATGTTTATTCTCATATTATACTAGCCAAAGAGAAGTTTGA  450

seq1  GTAATCTGATCTTTATTTTTAAGATGTAGAGGTATTTCTTTTACAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTGATCTTTATTTTTAAGATGTAGAGGTATTTCTTTTACAATGTT  500

seq1  ATGTATATATATATATACACACAAAGGAATCCATAAAGAAAAATGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATATATATACACACAAAGGAATCCATAAAGAAAAATGAAATT  550

seq1  GTGTTGTTTGTAGGAAAATGGGTGAAATGCAGATGGTGATGCTAGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTTGTAGGAAAATGGGTGAAATGCAGATGGTGATGCTAGATAAA  600

seq1  ATAGGTCACACAAGGAAAGACAAATCTAACATTTTTTTCTCCTACATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCACACAAGGAAAGACAAATCTAACATTTTTTTCTCCTACATGGA  650

seq1  ATCTATTTTTTCAAAAATGATATGAAAGGAAAAGGGCACTAATGACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTTTCAAAAATGATATGAAAGGAAAAGGGCACTAATGACAAGA  700

seq1  AGGGGGGAGAAGAGGGACTAGAGAGCAT-AAAAGGGATGACTATAAT-CC  748
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  AGGGGGGAGAAGAGGGACTAGAGAGCATAAAAAGGGATGACTATAATCCC  750

seq1  AAACATGCTGTGTGCCTATGTGCAAGTGTCAT-AAAAAAAAAACAATTA-  796
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  AAACATGCTGTGTGCCTATGTGCAAGTGTCATAAAAAAAAAAACAATTAT  800

seq1  TTTTATACAACTAATGTGT-GGGAAAGGTG-TTTAAAT-GGCCTGCG-TT  842
      ||||||||||||||||||| |||||||||| ||||||| |||||||| ||
seq2  TTTTATACAACTAATGTGTGGGGAAAGGTGTTTTAAATGGGCCTGCGTTT  850

seq1  TCTTTACATATTAAATAATAATATCTAAAGACATTTGTG-ATACTTAAT-  890
      |||||||||||| |||||||||||||||||||||||||| |||||| || 
seq2  TCTTTACATATT-AATAATAATATCTAAAGACATTTGTGAATACTTTATT  899

seq1  -ACCACAAACT-GAAAATCTGATACTGCTGGATGTAATTAATTTTTCACA  938
        ||||| ||| |||||||||||||||||||||||||||||||| |||||
seq2  ACCCACACACTGGAAAATCTGATACTGCTGGATGTAATTAATTTCTCACA  949

seq1  TTCAATTT  946
      ||||||||
seq2  TTCAATTT  957


seq1: chr18_7772711_7773278
seq2: B6Ng01-197M24.g_65_632 (reverse)

seq1  TCAGATTTTGTAGCACACCTTGTTGAGGCAGCTACTAGAATTTTTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTTGTAGCACACCTTGTTGAGGCAGCTACTAGAATTTTTGGAGA  50

seq1  CCCTGATACAGCTATGCCCTTGGTAAATGTTAAATGGAAGGATGTCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATACAGCTATGCCCTTGGTAAATGTTAAATGGAAGGATGTCCAAA  100

seq1  CTGGTAAATGGTATGGCCCAGATTCCGTTATTTCGAGATCTAGGAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAATGGTATGGCCCAGATTCCGTTATTTCGAGATCTAGGAGAGCT  150

seq1  GTTTGTGTTTTTCCACCGGATAAAGAACATCCGATTTGGGTACCAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTTTTTCCACCGGATAAAGAACATCCGATTTGGGTACCAGAAAG  200

seq1  GCTGACACAAAAATTGCTTCCCCCGGCTGAGACAAGAGATAAAGAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACACAAAAATTGCTTCCCCCGGCTGAGACAAGAGATAAAGAAGATG  250

seq1  CTGTGGTTCCTGATAATCCTGAAGCTCGTGATACCGAGTGATGCTGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTCCTGATAATCCTGAAGCTCGTGATACCGAGTGATGCTGTCCC  300

seq1  TCTATGGGCCATAGCTAGAACATGGCCCGTTCCTATGCCAGTTCATAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGGCCATAGCTAGAACATGGCCCGTTCCTATGCCAGTTCATAGCA  350

seq1  ATTCCTCAGTTTTCCCTGTATTCTTCTCCACTTCATGTACCTTAATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGTTTTCCCTGTATTCTTCTCCACTTCATGTACCTTAATTATG  400

seq1  TTCCATAATTGCACAGTTCCTTCTTAGTCTAATAATCTTACAGGATCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAATTGCACAGTTCCTTCTTAGTCTAATAATCTTACAGGATCCAG  450

seq1  TTCTACACTGCGTAAAGTACTCCCAACTTGTCCCCCTTACCAAGAGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACACTGCGTAAAGTACTCCCAACTTGTCCCCCTTACCAAGAGTTCC  500

seq1  CACCAGACTTTACACGTTGTCAAAGTCCCAATGATAGACAGAAACAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGACTTTACACGTTGTCAAAGTCCCAATGATAGACAGAAACAGATT  550

seq1  TTACCAGGTTTTGAATTC  568
      ||||||||||||||||||
seq2  TTACCAGGTTTTGAATTC  568


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