BAC Information

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BAC

Clone NameB6Ng01-200D14
Chromosome18 (Build37)
Map Location 85,141,961 - 85,142,934
singlet/doubletsinglet
Overlap geneFbxo15
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik, Cyb5, 1700034H14Rik
Downstream geneLOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200D14.bB6Ng01-200D14.g
ACCGA021346GA021347
length981910
definitionB6Ng01-200D14.b B6Ng01-200D14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagaggttatcaaagttacaagatctcttttattccttgtacc
aagagtagactccacaacagctgagagtgaattcttttgaagtgtttttc
ctttgtagatcttgcgcatatatcatattatcttatttttgtggccatga
tcctaaaaataggtaggtttttcgtctcctgtccctgatattaattgctt
gctatgtttctaggtcgagttgtcctcagtaagcatttgtcatgccatgt
gaggtactggaagcagtggtgtccttcctgggtggtgattatttagaaag
cttagagagggcactgcacttatggcgtcttcatcaggagcacatggtac
atgtttcctgctctgtacatctaatgagatgtaaactttgcaagtgattg
gcttctgtgagagcttacccagaggcagagactagctattgagcacagct
ctttagtttgtatggcctgttgcaaaattactaataaaatcaaaatggca
ttaagagcattaagtccaggtctttggaactacacaggatgtatcccaaa
aagacctggcagccgcacctatgattctgatgcccagcgcctgcttcagc
tgctggtccagatttaactccagcctttcagctctttctggtgacttgaa
ttctttaaaccctatttgttgtcaaggaaatttgtttcaatatgatattt
tatatagtaagattttgtaaggcagttatggtaacaggatgtcttatgta
aaacaatttatagactctaagtataaaatttgtaacttttctccgggtgt
gagtttcctttgctgttgatctccagtatgctggacttagagcttctctt
tgccttgggatcacactctttttttttttttttttaaagatttatttatt
tattatatgtaagtacacctgtactggtcttcagaatctcgttacagatg
gttgtgagcccacccatggtggtttgctggg
gaattcaacaaaaaccatccaagacctaaaaaaggaattagaaacaatga
agaaaacccaaagggagacaactctgaagggagaaatcctaggaaagaaa
tcaggaccatagatgcaagcatcagcagcagaatacaagagatggaagag
aaaatctcaggtacagaagattccatagggaacatggacacaacaatcaa
agagaatgcaaaatgcaaaaagatcctaactcaaaacattgaagaaatcc
aggaaacaatgagaagaccaaacctacggataatgggagtagatgggaat
aaagattttcttttttttttccactttttctccttttttattagatattt
tgtttatttacatttcaaatgctatctcaaaagttccctataccctcccc
ctgccctgctcccctacgcccctactcccacttcttggacctggcattcc
cctgtactggggcatataaagtttgcaataccaaggggccacttttccca
gtgatggccgactacaccatcttctgctacatatgcagctagagatacga
gctctgggggtactggttagttcatattgttgttctacctatagagttgc
agccccttcagctccttgggtgctttctctagcttctccattgggggccc
tgtgatccatccaatagatgactatgagcatccacttcactttttaaatt
tttcaacttaaagggccagcaaatgtcttcaaaaaattatagaagaaaac
ttcccatacctaaagaaagagatgttcatgaacatacaagaagcctacag
aactccaaatagactggaccagaaaaaaaattcctccccgacacataata
attcagaacaacaaatgcacaaataaagatagaatattgaaaagcagtaa
gggaaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85141961_85142934
seq2: B6Ng01-200D14.b_46_1026

seq1  GAATTCAAAGAGGTTATCAAAGTTACAAGATCTCTTTTATTCCTTGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGGTTATCAAAGTTACAAGATCTCTTTTATTCCTTGTACC  50

seq1  AAGAGTAGACTCCACAACAGCTGAGAGTGAATTCTTTTGAAGTGTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGACTCCACAACAGCTGAGAGTGAATTCTTTTGAAGTGTTTTTC  100

seq1  CTTTGTAGATCTTGCGCATATATCATATTATCTTATTTTTGTGGCCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGATCTTGCGCATATATCATATTATCTTATTTTTGTGGCCATGA  150

seq1  TCCTAAAAATAGGTAGGTTTTTCGTCTCCTGTCCCTGATATTAATTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAAATAGGTAGGTTTTTCGTCTCCTGTCCCTGATATTAATTGCTT  200

seq1  GCTATGTTTCTAGGTCGAGTTGTCCTCAGTAAGCATTTGTCATGCCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTTTCTAGGTCGAGTTGTCCTCAGTAAGCATTTGTCATGCCATGT  250

seq1  GAGGTACTGGAAGCAGTGGTGTCCTTCCTGGGTGGTGATTATTTAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACTGGAAGCAGTGGTGTCCTTCCTGGGTGGTGATTATTTAGAAAG  300

seq1  CTTAGAGAGGGCACTGCACTTATGGCGTCTTCATCAGGAGCACATGGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGAGGGCACTGCACTTATGGCGTCTTCATCAGGAGCACATGGTAC  350

seq1  ATGTTTCCTGCTCTGTACATCTAATGAGATGTAAACTTTGCAAGTGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCTGCTCTGTACATCTAATGAGATGTAAACTTTGCAAGTGATTG  400

seq1  GCTTCTGTGAGAGCTTACCCAGAGGCAGAGACTAGCTATTGAGCACAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGAGAGCTTACCCAGAGGCAGAGACTAGCTATTGAGCACAGCT  450

seq1  CTTTAGTTTGTATGGCCTGTTGCAAAATTACTAATAAAATCAAAATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTTGTATGGCCTGTTGCAAAATTACTAATAAAATCAAAATGGCA  500

seq1  TTAAGAGCATTAAGTCCAGGTCTTTGGAACTACACAGGATGTATCCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCATTAAGTCCAGGTCTTTGGAACTACACAGGATGTATCCCAAA  550

seq1  AAGACCTGGCAGCCGCACCTATGATTCTGATGCCCAGCGCCTGCTTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGGCAGCCGCACCTATGATTCTGATGCCCAGCGCCTGCTTCAGC  600

seq1  TGCTGGTCCAGATTTAACTCCAGCCTTTCAGCTCTTTCTGGTGACTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCCAGATTTAACTCCAGCCTTTCAGCTCTTTCTGGTGACTTGAA  650

seq1  TTCTTTAAACCCTATTTGTTGTCAAGGAAATTTGTTTCAATATGATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAACCCTATTTGTTGTCAAGGAAATTTGTTTCAATATGATATTT  700

seq1  TATATAGTAAGATTTTGTAAGGCAGTTATGGTAACAGGATGTCTTATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTAAGATTTTGTAAGGCAGTTATGGTAACAGGATGTCTTATGTA  750

seq1  AAACAATTTATAGACTCTAAGTATAAAATTTGTAAC-TTTCTCCGGGTGT  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAACAATTTATAGACTCTAAGTATAAAATTTGTAACTTTTCTCCGGGTGT  800

seq1  GAGTTTCC-TTGCTGTTGATCTCCAGTATGCTGGACTTAGAGCTTCTC-T  847
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  GAGTTTCCTTTGCTGTTGATCTCCAGTATGCTGGACTTAGAGCTTCTCTT  850

seq1  TGCCTT-GGATCACACTCTTTTTTTTTTTTTTTTTTTTAAAGATTTATTT  896
      |||||| |||||||||||   |||||||||||||||||||||||||||||
seq2  TGCCTTGGGATCACACTC---TTTTTTTTTTTTTTTTTAAAGATTTATTT  897

seq1  ATTTATTATATGTAAGTACA-CTGTAGCTGTCTTCAG-ATCTCGTTACAG  944
      |||||||||||||||||||| |||||   |||||||| ||||||||||||
seq2  ATTTATTATATGTAAGTACACCTGTACTGGTCTTCAGAATCTCGTTACAG  947

seq1  ATGGTTGTGAGCC--ACCAT-GTGG-TTGCTGGG  974
      |||||||||||||   |||| |||| ||||||||
seq2  ATGGTTGTGAGCCCACCCATGGTGGTTTGCTGGG  981