BAC Information

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BAC

Clone NameB6Ng01-200G15
Chromosome18 (Build37)
Map Location 23,569,007 - 23,719,454
singlet/doubletdoublet
Overlap geneDtna
Upstream geneAsxl3, Nol4, LOC100040579, LOC665797
Downstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200G15.bB6Ng01-200G15.g
ACCGA021482GA021483
length1,2111,170
definitionB6Ng01-200G15.b B6Ng01-200G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,718,239 - 23,719,454)(23,569,007 - 23,570,190)
sequence
gaattcattagaaatgaatgaacagggaactgatgctcactcgagccaga
ggaatttacttttcaaaatgtccctaaaatcttggaaggattgcaatcaa
gaaagttatgtgcaaattagtaatttattgaggcttttcttaaataattt
agttctgtaccttactcaagccccttcccaaactaatgttcaaatgttca
aaaacttagtgggaagaaagaaggtgttaaatgggaagccttggcagagt
ccacggaggttctgtatgtgactacattgcagatactgggctccaggtgt
atcaaccaagcattagtttggaagaagaatattagtaagaacacagtgtt
tagatttgattcttttgattaatggtcttgaggtaagtccttataagatg
tgaaaacaaatagcccctacgaaccttaccagttttgttttgctttatgc
tttccaatctccacaccgtctctgttcctaatgcacaatttctatcacag
ggcaggttttctttttttctttttgctaagagtcctcagagagaaacatc
acatctcacagagataacatctcagcttcattttaatttcctggttaagg
tgttgtaataaagcttcatgaaaaaggtctacaacacattttcatgtaaa
atcgaaatgagcatcctgccgatccccaaaggccctggcaggacacacac
tgcctatcaggaaaaaaatatccagtgcttcttaaattatgtttggagac
tgacatcattattcaaaatgagataataattattggctcggtaaccatca
cactataaattaaatttaactaaattcaatccaatcaagcacttattatg
ccaattattttcaacttgttgtaccaggaatcataaaaataataagggaa
tgtaaatggggaaaagaacaatatctaaattctccttgtccagtttagct
tgtacagaatatgtttactgacgttagagcagatactctacacactatcc
ctgttgtggccagtcactttgtagccgtcatggtagtcctttatagattc
ctttctattgtgcctttaccactctgtatattgttacacccccagtttgg
cttttactggtctttttggtagccatcctcacattatatccattccatgc
ttccatcatccaggaaagagtgtgagagctcctcttatggccagtgccat
tatcttccact
gaattctttggcgctggagttacagatggttatgagctgtgcatcatgag
tgttggggacaaaactcagatcctctgcaaaaaggaaaaaaaaaaaaaaa
cctgcatgtgttcttaaccactgagccacctctccagcctctaaaagcac
acaagtccatttgtacataaagccttttcatgactggagttattttcaca
tgacaggcacctggaaaggaatctatttcacccaattttgtctgataatg
tctgtataatacattgatgttttcatttttgttatatagcttagtgtgca
atatgatattcttgatatttgtagaaacacggttaccaaagttatacaag
tgagtacactgttatctcatgcaattaatgttctttcttcgtaaattacc
agtttatagatcaatattattatctataagtcttatgctctatgctagat
ctttaaacttagtcatactccttaacacatgcctttttgacctacttttc
acatccttaccttaactactctctatctatccctgtgactaccattttgt
ttcctatagtttatgtttgatgttcgttttctcagatttcttattttggt
aagaatttatgttttttagttggctcattttcttagcctaaagtcttcta
gattcttggtaccacatataaggttcttccctcttggttgtatgatctta
catgcaagtgtacaagctaaaacgtcttcgttaaatcctccgctgattca
catttcagttgttctccacatcttactttattgggagtcagagccaatga
tggacatgtaggtatctttgtaagttcatgattctacttcctttcagtgt
ctactcacagagatgctgcaaggcatgatggcatttgtctggactttaaa
aagcattatacatgcatgccgataatctgaatgcctttctgattagggcg
cctcttttctaatgttgtttatgttgtagttttcctattgtcttgggtag
tgtctactcaatacttttctaataatcaccttcatataattttcttctta
gggaagagaacctctatttctgcactatactaacagtctttaacctgtaa
aatgttatgagtaattaataaattgcattgatcacttaagcttcaacgtt
ttcaaaaatcgaatgctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23718239_23719454
seq2: B6Ng01-200G15.b_48_1258 (reverse)

seq1  AGTG---GAGAATGGC-CTGGCCATAAG-TGAGC-CTCACACTCTTTCTT  44
      ||||   || |||||| |||||||||||  |||| ||||||||||||| |
seq2  AGTGGAAGATAATGGCACTGGCCATAAGAGGAGCTCTCACACTCTTTCCT  50

seq1  GGGATGAATAGAAAGGGAAAGAAATTGGATATAAATGTGAGGGTTGCTTA  94
       ||||| || |||   | | | || ||||||| ||||||||| | |||  
seq2  -GGATG-ATGGAA---GCATGGAA-TGGATAT-AATGTGAGGATGGCTAC  93

seq1  CAAAAAGA-CAGTAAAAGCCCAAACTGGGGGTGTTAACAATATACAGAGT  143
      |||||||| ||||||||| |||||||||||||| ||||||||||||||||
seq2  CAAAAAGACCAGTAAAAG-CCAAACTGGGGGTG-TAACAATATACAGAGT  141

seq1  GGTAAAGCCAC-ATAGAAA-GAATCTATAAAGAACTACTCAATGACGGCT  191
      ||||||| ||| ||||||| |||||||||||| ||||  | |||||||||
seq2  GGTAAAGGCACAATAGAAAGGAATCTATAAAGGACTA--CCATGACGGCT  189

seq1  ACAAAGTGACTGGCCACAACAGGGATAGTGTGTTAGAGTATCTTGCTTCT  241
      |||||||||||||||||||||||||||||||| ||||||||| ||| |||
seq2  ACAAAGTGACTGGCCACAACAGGGATAGTGTG-TAGAGTATC-TGC-TCT  236

seq1  AACGTCAGTAAACATATTCTGTACAAGCTAAACTGGACAAGGAGAATTTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCAGTAAACATATTCTGTACAAGCTAAACTGGACAAGGAGAATTTA  286

seq1  GATATTGTTCTTTTCCCCATTTACATTCCCTTATTATTTTTATGATTCCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGTTCTTTTCCCCATTTACATTCCCTTATTATTTTTATGATTCCT  336

seq1  GGTACAACAAGTTGAAAATAATTGGCATAATAAGTGCTTGATTGGATTGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAACAAGTTGAAAATAATTGGCATAATAAGTGCTTGATTGGATTGA  386

seq1  ATTTAGTTAAATTTAATTTATAGTGTGATGGTTACCGAGCCAATAATTAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTAAATTTAATTTATAGTGTGATGGTTACCGAGCCAATAATTAT  436

seq1  TATCTCATTTTGAATAATGATGTCAGTCTCCAAACATAATTTAAGAAGCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATTTTGAATAATGATGTCAGTCTCCAAACATAATTTAAGAAGCA  486

seq1  CTGGATATTTTTTTCCTGATAGGCAGTGTGTGTCCTGCCAGGGCCTTTGG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATATTTTTTTCCTGATAGGCAGTGTGTGTCCTGCCAGGGCCTTTGG  536

seq1  GGATCGGCAGGATGCTCATTTCGATTTTACATGAAAATGTGTTGTAGACC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCGGCAGGATGCTCATTTCGATTTTACATGAAAATGTGTTGTAGACC  586

seq1  TTTTTCATGAAGCTTTATTACAACACCTTAACCAGGAAATTAAAATGAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGAAGCTTTATTACAACACCTTAACCAGGAAATTAAAATGAAG  636

seq1  CTGAGATGTTATCTCTGTGAGATGTGATGTTTCTCTCTGAGGACTCTTAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGTTATCTCTGTGAGATGTGATGTTTCTCTCTGAGGACTCTTAG  686

seq1  CAAAAAGAAAAAAAGAAAACCTGCCCTGTGATAGAAATTGTGCATTAGGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAAAAAAAGAAAACCTGCCCTGTGATAGAAATTGTGCATTAGGA  736

seq1  ACAGAGACGGTGTGGAGATTGGAAAGCATAAAGCAAAACAAAACTGGTAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACGGTGTGGAGATTGGAAAGCATAAAGCAAAACAAAACTGGTAA  786

seq1  GGTTCGTAGGGGCTATTTGTTTTCACATCTTATAAGGACTTACCTCAAGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCGTAGGGGCTATTTGTTTTCACATCTTATAAGGACTTACCTCAAGA  836

seq1  CCATTAATCAAAAGAATCAAATCTAAACACTGTGTTCTTACTAATATTCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATCAAAAGAATCAAATCTAAACACTGTGTTCTTACTAATATTCT  886

seq1  TCTTCCAAACTAATGCTTGGTTGATACACCTGGAGCCCAGTATCTGCAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAAACTAATGCTTGGTTGATACACCTGGAGCCCAGTATCTGCAAT  936

seq1  GTAGTCACATACAGAACCTCCGTGGACTCTGCCAAGGCTTCCCATTTAAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACATACAGAACCTCCGTGGACTCTGCCAAGGCTTCCCATTTAAC  986

seq1  ACCTTCTTTCTTCCCACTAAGTTTTTGAACATTTGAACATTAGTTTGGGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTTCTTCCCACTAAGTTTTTGAACATTTGAACATTAGTTTGGGA  1036

seq1  AGGGGCTTGAGTAAGGTACAGAACTAAATTATTTAAGAAAAGCCTCAATA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTTGAGTAAGGTACAGAACTAAATTATTTAAGAAAAGCCTCAATA  1086

seq1  AATTACTAATTTGCACATAACTTTCTTGATTGCAATCCTTCCAAGATTTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTAATTTGCACATAACTTTCTTGATTGCAATCCTTCCAAGATTTT  1136

seq1  AGGGACATTTTGAAAAGTAAATTCCTCTGGCTCGAGTGAGCATCAGTTCC  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACATTTTGAAAAGTAAATTCCTCTGGCTCGAGTGAGCATCAGTTCC  1186

seq1  CTGTTCATTCATTTCTAATGAATTC  1216
      |||||||||||||||||||||||||
seq2  CTGTTCATTCATTTCTAATGAATTC  1211

seq1: chr18_23569007_23570190
seq2: B6Ng01-200G15.g_67_1236

seq1  GAATTCTTTGGCGCTGGAGTTACAGATGGTTATGAGCTGTGCATCATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCGCTGGAGTTACAGATGGTTATGAGCTGTGCATCATGAG  50

seq1  TGTTGGGGACAAAACTCAGATCCTCTGCAAAAAGGAAAAAAAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGACAAAACTCAGATCCTCTGCAAAAAGGAAAAAAAAAAAAAAA  100

seq1  CCTGCATGTGTTCTTAACCACTGAGCCACCTCTCCAGCCTCTAAAAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGTGTTCTTAACCACTGAGCCACCTCTCCAGCCTCTAAAAGCAC  150

seq1  ACAAGTCCATTTGTACATAAAGCCTTTTCATGACTGGAGTTATTTTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCCATTTGTACATAAAGCCTTTTCATGACTGGAGTTATTTTCACA  200

seq1  TGACAGGCACCTGGAAAGGAATCTATTTCACCCAATTTTGTCTGATAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGCACCTGGAAAGGAATCTATTTCACCCAATTTTGTCTGATAATG  250

seq1  TCTGTATAATACATTGATGTTTTCATTTTTGTTATATAGCTTAGTGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATAATACATTGATGTTTTCATTTTTGTTATATAGCTTAGTGTGCA  300

seq1  ATATGATATTCTTGATATTTGTAGAAACACGGTTACCAAAGTTATACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATATTCTTGATATTTGTAGAAACACGGTTACCAAAGTTATACAAG  350

seq1  TGAGTACACTGTTATCTCATGCAATTAATGTTCTTTCTTCGTAAATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACACTGTTATCTCATGCAATTAATGTTCTTTCTTCGTAAATTACC  400

seq1  AGTTTATAGATCAATATTATTATCTATAAGTCTTATGCTCTATGCTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAGATCAATATTATTATCTATAAGTCTTATGCTCTATGCTAGAT  450

seq1  CTTTAAACTTAGTCATACTCCTTAACACATGCCTTTTTGACCTACTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACTTAGTCATACTCCTTAACACATGCCTTTTTGACCTACTTTTC  500

seq1  ACATCCTTACCTTAACTACTCTCTATCTATCCCTGTGACTACCATTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTACCTTAACTACTCTCTATCTATCCCTGTGACTACCATTTTGT  550

seq1  TTCCTATAGTTTATGTTTGATGTTCGTTTTCTCAGATTTCTTATTTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATAGTTTATGTTTGATGTTCGTTTTCTCAGATTTCTTATTTTGGT  600

seq1  AAGAATTTATGTTTTTTAGTTGGCTCATTTTCTTAGCCTAAAGTCTTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATGTTTTTTAGTTGGCTCATTTTCTTAGCCTAAAGTCTTCTA  650

seq1  GATTCTTGGTACCACATATAAGGTTCTTCCCTCTTGGTTGTATGATCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTGGTACCACATATAAGGTTCTTCCCTCTTGGTTGTATGATCTTA  700

seq1  CATGCAAGTGTACAAGCTAAAACGTCTTCGTTAAATCCTCCGCTGATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAGTGTACAAGCTAAAACGTCTTCGTTAAATCCTCCGCTGATTCA  750

seq1  CATTTCAGTTGTTCTCCACATCTTACTTTATTGGGAGTCAGAGCCAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGTTGTTCTCCACATCTTACTTTATTGGGAGTCAGAGCCAATGA  800

seq1  TGGACATGTAGGTATCTTTGTAAGTTCATGATTCTACTTCCTTTCAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATGTAGGTATCTTTGTAAGTTCATGATTCTACTTCCTTTCAGTGT  850

seq1  CTACTCACAGAGATGCTGCAAGGCATGATGGCATTTGTCTGGACTTTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCACAGAGATGCTGCAAGGCATGATGGCATTTGTCTGGACTTTAAA  900

seq1  AAGCA-TATACATGCATGCCGATAATCTGAATGCC-TTCTGATTAGGGCG  948
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGCATTATACATGCATGCCGATAATCTGAATGCCTTTCTGATTAGGGCG  950

seq1  CCTCTTTTCTAATGTTGGTTATG-TGTAGTTTTCCTATTGTCTTGGGTAG  997
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  CCTCTTTTCTAATGTTGTTTATGTTGTAGTTTTCCTATTGTCTTGGGTAG  1000

seq1  TGTCTACCTCAATTACTTTTCTAATAATCACCTTCATAATTATTTTCTTT  1047
      |||||| ||||| |||||||||||||||||||||||| || |||||||| 
seq2  TGTCTA-CTCAA-TACTTTTCTAATAATCACCTTCAT-ATAATTTTCTT-  1046

seq1  CCTTTAGGGAGAGAACTCCTATTCTTGCACTAATACTAACAGTCTTTAAA  1097
       |||  || |||||||  |||||  |||||| ||||||||||||||| ||
seq2  -CTTAGGGAAGAGAACCTCTATTTCTGCACT-ATACTAACAGTCTTT-AA  1093

seq1  ACTGTTAAAATGTTATGAGGTACATAATAAAATATAGCATTTTGTATCAA  1147
       ||| ||||||||||||| |||  ||||||   || |||||    ||| |
seq2  CCTG-TAAAATGTTATGA-GTAATTAATAA---ATTGCATT---GATC-A  1134

seq1  CTTATAGCTTCAACGTTTTCAAAAATCGGAATG-TGTG  1184
      |||| |||||||||||||||||||||| ||||| ||||
seq2  CTTA-AGCTTCAACGTTTTCAAAAATC-GAATGCTGTG  1170