BAC Information

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BAC

Clone NameB6Ng01-201I24
Chromosome18 (Build37)
Map Location 14,506,600 - 14,592,941
singlet/doubletdoublet
Overlap geneLOC382096
Upstream geneLOC665379, LOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391
Downstream geneLOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201I24.bB6Ng01-201I24.g
ACCGA022301GA022302
length1,0861,111
definitionB6Ng01-201I24.b B6Ng01-201I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,506,600 - 14,507,685)(14,591,819 - 14,592,941)
sequence
gaattccttgttttacaactttagactgagcatagctcgaagtttctcca
gctttcaaggaaacattcttttagtgacacctgagtacatatttagcaag
accacccaacagtttctagtcatctttcttcacagttatgattcccatca
agtgttgttaaacttgcacaaggaggcccaagttaagcaaaatgttgtac
ttaaaagactacatctcatttccaataataaacaggattaccaccaagga
ggaataaaaggtacactagtgtgtagggcacctgaacaaaacagtccctc
tttttttgcatataggtagtctgcaaagaagtgtgcccattagtacagag
ctgagcaagggcttacaaagaacagatgccatggggagaaagctgggtgg
gcaaaatgaagggtgcttgacaccaagcctgatggcttggactcaagcct
tgggatgcacagggtaggagatctggctcccttgagttgttctctgacat
ctacacatgcaccagggctcatgcatgcatacacacacatacacacagag
ggagaaacagacagacagacagacacaaagacagagacacacatgagaga
gagaggagatgagggggatatatatagcaaaagattttaaaggaagatgg
atggagaacaagaatattgaccctgttttctgtttgggttttaaaaaatg
caaaaagatgctttggcatcctttacctccccgaggggcagcatgtcact
taattaaaaagatccttgagcatcgccaggggtgatttctttgccaagga
gtattttccttctggatgatggctttggccaaggatgctgcagtcacagc
acaggtgaatgtttctgatacctgtgcagcctgcacaaccacagggaaac
tcacatcctcgttttaccattctgaaaacagttttagaccatttacaggt
ttcaaggaaacaacttattgacttatgcatatagaacgcccattttaatc
aattaattttccattagaggataaagtcctattaggacccacctaaaatt
catatcataaaagattctgtatagccagactatttt

gaattctggaattcctgtaatgtcctttaaatctggcctgcaagcacact
tggttgtctctctatcttggtaataggagaccccagcatgccagatttct
gcagaataaaatgttcttcgtatttacatactatttgagaccagggtatc
attcttcctcgaatcatggacccttacaatacaatttcaagacaaattgg
tggttgttgatcaaaagttctccagggtagttgttgagatgcttactttc
caatctgtgcctggataggcaggtagggaacaatagagattgtgttctgt
gcccatgggaagtgggcaagaggacttaacgtagcaccatgacccagaca
aagtagacaccatgataatttgataattattaaagtggacagtgtggtga
taattgcatgatcgagtctgatgagtgcacagaaggtaaatttggggaca
aagttatgctcaatggtcatgcctgggccagtagctggtttggtgggact
gagcatgctcagttcaggctgagatgactgagagaactaggttaggttgg
aactgtctggaaatgagggacatgaaaagccaggctgtggagggctgaga
agacagagatctgaagcattcttgtagacaccaggagatactacacagac
agagaaagcttggatgcccatcacatgatgagcgtacatttaccttgaac
tcatcttagggaaaagctgtgtccacctgcctcagacttcattattttct
tctagtctttttttctaactatctgaaagattttacttagaaaccactta
aaaataacaggtataaaattttctgtcttcagaaaacattttgctttttg
agattataattacatctccttcccttttccccccttcatgctctttccca
ctcttgttcaaattcatggcctcttttatctaaatgtatacacacacaca
cacacacacacacacacacacacacacacacaccacactttactgctcag
cttatatatgtttcaggcaggtcattgtactagcaactaattgccatgct
ctttctaggaagatcacaaggaagaagatttgaataataagtacatgttc
aagagaacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14506600_14507685
seq2: B6Ng01-201I24.b_46_1131

seq1  GAATTCCTTGTTTTACAACTTTAGACTGAGCATAGCTCGAAGTTTCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTTACAACTTTAGACTGAGCATAGCTCGAAGTTTCTCCA  50

seq1  GCTTTCAAGGAAACATTCTTTTAGTGACACCTGAGTACATATTTAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAAGGAAACATTCTTTTAGTGACACCTGAGTACATATTTAGCAAG  100

seq1  ACCACCCAACAGTTTCTAGTCATCTTTCTTCACAGTTATGATTCCCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCAACAGTTTCTAGTCATCTTTCTTCACAGTTATGATTCCCATCA  150

seq1  AGTGTTGTTAAACTTGCACAAGGAGGCCCAAGTTAAGCAAAATGTTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTAAACTTGCACAAGGAGGCCCAAGTTAAGCAAAATGTTGTAC  200

seq1  TTAAAAGACTACATCTCATTTCCAATAATAAACAGGATTACCACCAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGACTACATCTCATTTCCAATAATAAACAGGATTACCACCAAGGA  250

seq1  GGAATAAAAGGTACACTAGTGTGTAGGGCACCTGAACAAAACAGTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAAAGGTACACTAGTGTGTAGGGCACCTGAACAAAACAGTCCCTC  300

seq1  TTTTTTTGCATATAGGTAGTCTGCAAAGAAGTGTGCCCATTAGTACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGCATATAGGTAGTCTGCAAAGAAGTGTGCCCATTAGTACAGAG  350

seq1  CTGAGCAAGGGCTTACAAAGAACAGATGCCATGGGGAGAAAGCTGGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAAGGGCTTACAAAGAACAGATGCCATGGGGAGAAAGCTGGGTGG  400

seq1  GCAAAATGAAGGGTGCTTGACACCAAGCCTGATGGCTTGGACTCAAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGAAGGGTGCTTGACACCAAGCCTGATGGCTTGGACTCAAGCCT  450

seq1  TGGGATGCACAGGGTAGGAGATCTGGCTCCCTTGAGTTGTTCTCTGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGCACAGGGTAGGAGATCTGGCTCCCTTGAGTTGTTCTCTGACAT  500

seq1  CTACACATGCACCAGGGCTCATGCATGCATACACACACATACACACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATGCACCAGGGCTCATGCATGCATACACACACATACACACAGAG  550

seq1  GGAGAAACAGACAGACAGACAGACACAAAGACAGAGACACACATGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACAGACAGACAGACAGACACAAAGACAGAGACACACATGAGAGA  600

seq1  GAGAGGAGATGAGGGGGATATATATAGCAAAAGATTTTAAAGGAAGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGATGAGGGGGATATATATAGCAAAAGATTTTAAAGGAAGATGG  650

seq1  ATGGAGAACAAGAATATTGACCCTGTTTTCTGTTTGGGTTTTAAAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAACAAGAATATTGACCCTGTTTTCTGTTTGGGTTTTAAAAAATG  700

seq1  CAAAAAGATGCTTTGGCATCCTTTACCTCCCCGA-GGGCAGCATGTCACT  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAAAAAGATGCTTTGGCATCCTTTACCTCCCCGAGGGGCAGCATGTCACT  750

seq1  TAATTAAAAAGATCCTTGAGCATCGCCAGGGGTGATTTCTTTGCCAAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAAGATCCTTGAGCATCGCCAGGGGTGATTTCTTTGCCAAGGA  800

seq1  GTATTTTCCTTCTGGATGATGGCTTTGGCCAAGGATGCTGCAGTCACAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCCTTCTGGATGATGGCTTTGGCCAAGGATGCTGCAGTCACAGC  850

seq1  ACAGGTGAATG-TTCTGATACCTGTGCAGCCTGCACAACCACA-GGAAAC  897
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  ACAGGTGAATGTTTCTGATACCTGTGCAGCCTGCACAACCACAGGGAAAC  900

seq1  TCACATCCTCG-TTTACCATTCTGAAAACAGTTTTAGACCATTTACAGGT  946
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCTCGTTTTACCATTCTGAAAACAGTTTTAGACCATTTACAGGT  950

seq1  TCAAAAGGAAACAACT--ATGAC-TATGCATATAGAACGGCCATTTTAAT  993
      |   ||||||||||||   |||| ||||||||||||||| ||||||||||
seq2  T-TCAAGGAAACAACTTATTGACTTATGCATATAGAACGCCCATTTTAAT  999

seq1  CAAATTAAATTTTCCAATTAGAGATAAAAGTCCTATTAAGA-CCACCTAA  1042
      |||  | |||||||| |||||||   |||||||||||| || ||||||||
seq2  CAA--TTAATTTTCC-ATTAGAGGATAAAGTCCTATTAGGACCCACCTAA  1046

seq1  AATTCATATTCATAAAAGATTTCTGGTTATAGCAAGACTATTTT  1086
      |||||||| |||||||||| |||||  |||||| ||||||||||
seq2  AATTCATA-TCATAAAAGA-TTCTG--TATAGCCAGACTATTTT  1086


seq1: chr18_14591819_14592941
seq2: B6Ng01-201I24.g_65_1175 (reverse)

seq1  ACTG-TCTCTTGGCACCAATGTACTTATTATCAAAATCTTC-TCCTGGTG  48
      |||| |||||||  | | |||||||||||||  |||||||| |||| |||
seq2  ACTGTTCTCTTG--AAC-ATGTACTTATTATTCAAATCTTCTTCCTTGTG  47

seq1  ATCTTTCCTAGGAAAGAGCATGCCAATTAGTTGCTTAGTACCAAATGACC  98
      ||| |||||| ||||||||||| ||||||||||| ||||||  |||||||
seq2  ATC-TTCCTA-GAAAGAGCATGGCAATTAGTTGC-TAGTAC--AATGACC  92

seq1  TGCCCTGAAAACATTATATAGGCTGAGCAGGTAAAGTGTGTGTGTGTGTG  148
      || |||| ||||| |||||| |||||||| |||||||||| |||||||||
seq2  TG-CCTG-AAACA-TATATAAGCTGAGCA-GTAAAGTGTG-GTGTGTGTG  137

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTATAACAATTAGATA  198
      |||||||||||||||||||||||||||||||||| ||| ||| |||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-TAT-ACATTTAGATA  185

seq1  AAAGAGGCCATGAATTTGAACAAGAGTGGGAAAGAGCATGAAGGGGGGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCCATGAATTTGAACAAGAGTGGGAAAGAGCATGAAGGGGGGAA  235

seq1  AAGGGAAGGAGATGTAATTATAATCTCAAAAAGCAAAATGTTTTCTGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGAGATGTAATTATAATCTCAAAAAGCAAAATGTTTTCTGAAG  285

seq1  ACAG-AAATTTTATACCTGTTATTTTTAAGTGGTTTCTAAGTAAAATCTT  347
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATTTTATACCTGTTATTTTTAAGTGGTTTCTAAGTAAAATCTT  335

seq1  TCAGATAGTTAGAAAAAAAGACTAGAAGAAAATAATGAAGTCTGAGGCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGTTAGAAAAAAAGACTAGAAGAAAATAATGAAGTCTGAGGCAG  385

seq1  GTGGACACAGCTTTTCCCTAAGATGAGTTCAAGGTAAATGTACGCTCATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACAGCTTTTCCCTAAGATGAGTTCAAGGTAAATGTACGCTCATC  435

seq1  ATGTGATGGGCATCCAAGCTTTCTCTGTCTGTGTAGTATCTCCTGGTGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATGGGCATCCAAGCTTTCTCTGTCTGTGTAGTATCTCCTGGTGTC  485

seq1  TACAAGAATGCTTCAGATCTCTGTCTTCTCAGCCCTCCACAGCCTGGCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAATGCTTCAGATCTCTGTCTTCTCAGCCCTCCACAGCCTGGCTT  535

seq1  TTCATGTCCCTCATTTCCAGACAGTTCCAACCTAACCTAGTTCTCTCAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTCCCTCATTTCCAGACAGTTCCAACCTAACCTAGTTCTCTCAGT  585

seq1  CATCTCAGCCTGAACTGAGCATGCTCAGTCCCACCAAACCAGCTACTGGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGCCTGAACTGAGCATGCTCAGTCCCACCAAACCAGCTACTGGC  635

seq1  CCAGGCATGACCATTGAGCATAACTTTGTCCCCAAATTTACCTTCTGTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATGACCATTGAGCATAACTTTGTCCCCAAATTTACCTTCTGTGC  685

seq1  ACTCATCAGACTCGATCATGCAATTATCACCACACTGTCCACTTTAATAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCAGACTCGATCATGCAATTATCACCACACTGTCCACTTTAATAA  735

seq1  TTATCAAATTATCATGGTGTCTACTTTGTCTGGGTCATGGTGCTACGTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAATTATCATGGTGTCTACTTTGTCTGGGTCATGGTGCTACGTTA  785

seq1  AGTCCTCTTGCCCACTTCCCATGGGCACAGAACACAATCTCTATTGTTCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTTGCCCACTTCCCATGGGCACAGAACACAATCTCTATTGTTCC  835

seq1  CTACCTGCCTATCCAGGCACAGATTGGAAAGTAAGCATCTCAACAACTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGCCTATCCAGGCACAGATTGGAAAGTAAGCATCTCAACAACTAC  885

seq1  CCTGGAGAACTTTTGATCAACAACCACCAATTTGTCTTGAAATTGTATTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAACTTTTGATCAACAACCACCAATTTGTCTTGAAATTGTATTG  935

seq1  TAAGGGTCCATGATTCGAGGAAGAATGATACCCTGGTCTCAAATAGTATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTCCATGATTCGAGGAAGAATGATACCCTGGTCTCAAATAGTATG  985

seq1  TAAATACGAAGAACATTTTATTCTGCAGAAATCTGGCATGCTGGGGTCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACGAAGAACATTTTATTCTGCAGAAATCTGGCATGCTGGGGTCTC  1035

seq1  CTATTACCAAGATAGAGAGACAACCAAGTGTGCTTGCAGGCCAGATTTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACCAAGATAGAGAGACAACCAAGTGTGCTTGCAGGCCAGATTTAA  1085

seq1  AGGACATTACAGGAATTCCAGAATTC  1123
      ||||||||||||||||||||||||||
seq2  AGGACATTACAGGAATTCCAGAATTC  1111


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