BAC Information

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BAC

Clone NameB6Ng01-203G02
Chromosome18 (Build37)
Map Location 29,581,461 - 29,698,035
singlet/doubletdoublet
Overlap gene4930578E11Rik
Upstream geneEG625997, BC051408, LOC100040930
Downstream geneLOC666073, Pik3c3, LOC666094, LOC666100, EG666111, EG666114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203G02.bB6Ng01-203G02.g
ACCGA023611GA023612
length1,0631,130
definitionB6Ng01-203G02.b B6Ng01-203G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,581,461 - 29,582,254)(29,696,895 - 29,698,035)
sequence
gaattctttgttcagttctgagccccattttttaatgaggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagtacaagccattgctgtt
ctgttcaggaattttccccctgtgcccatatcttcaaggcttttccccac
tttcttctctataagtttcagtgtctctggttttatgtgaagtgccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccgtaggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tttccttgagaagactttttgctatcctaggtttgttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatcgtcttataattttagatacacctatgtagt
ctaaattccaatgctaatttatttgggtttttttgacccaagtaaggtgt
acattagctgttacttgagtgtttcacattgtctgggagcatttataact
atagactgggaaatgttgtacaattctgacattcacatagcactctatat
ttcaggagcatagggacatgatctgtatgtttatcatgaccttcaaacct
aatgcaaattcctgacacagaatataattgcaatcagtaaacccctgagt
acagcattacatt

gaattcattcataatatcttcaatttaagtaactttgtattagtcagggt
tctctgtggaaaagcaatgatagaaggaataatgtataggtgtatatata
catatatatgtgtgtattctctaataatgtttgttatgtatatatatatg
tatattatgtataatatgtataatatttatctatccctcagtatatctat
atatgcatataaatattaatttatttagttattagagtggcttagtagtt
gtggtagaagtagtccaacaataactgccaactaacagaaagcccaagga
tccaagaatcctttagttgttaaatctactagaccagatgccttcaacat
tcaaaacatggtgttgtattcctagggagataataaaaaaactgccaatt
ttaagtccatattgaaatcttgaaaaatagttttaacaccagtagagaca
cagctaaggatagatgaacttgccagtgaagggggggacaagtagaaaga
aagcagagcttccttctcccatgtcctttgatggggcctgccaccaaaag
ataaaggccatctttagaatggatctttggacctcaaattatctatattt
agggttcaactcccatctcaaattatccaaccagaaacatccctccctgg
tgccctaagctgttttatatacatctacttgtagaaaaactgaaatcaaa
gattggaatcacaattcttattcagattcattccttttttactcttttat
aacatctctcttaaatggacaggtagtgatgggccatttacaatttagtg
aaataaatttcaagatcaagtaatctctgttctatcactggtgtggatga
ctgtggtcattaacctgggactgagatgggaactccatacacagacataa
caagatgattagaaatgtcaaagaggttaggacactgtagtaagcatgag
gaatatggaatatgagataaatgtcaaattatatagagtggacttcagta
atttgtcctccttaagaactggagaaatgaaagctactgggtagacctgc
cagttgatacttcatagcacattacgagacctgaacccttcagttagccc
atgtaagactgtcctggagaaacggtaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29581461_29582254
seq2: B6Ng01-203G02.b_314_1106

seq1  TGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTTCTCTATAAGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTTCTCTATAAGTTTCA  50

seq1  GTGTCTCTGGTTTTATGTGAAGTGCCTTGATCCACTTAGATTTGACCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTGGTTTTATGTGAAGTGCCTTGATCCACTTAGATTTGACCTTA  100

seq1  GTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACACGATAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACACGATAACAA  150

seq1  CCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGA  200

seq1  TGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCGTAGGTGTGTGGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCGTAGGTGTGTGGGTTC  250

seq1  ATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCTCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCTCTATA  300

seq1  CCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGCTTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGCTTTAGGT  350

seq1  CAGGCATGGTGATTCCACCAGAGGTTCTTTTTTCCTTGAGAAGACTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGTGATTCCACCAGAGGTTCTTTTTTCCTTGAGAAGACTTTTT  400

seq1  GCTATCCTAGGTTTGTTGTTATTCCAGATGAATTTGCAAATTGCTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTAGGTTTGTTGTTATTCCAGATGAATTTGCAAATTGCTCCTTC  450

seq1  TAATTCGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATC  500

seq1  GTCTTATAATTTTAGATACACCTATGTAGTCTAAATTCCAATGCTAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATAATTTTAGATACACCTATGTAGTCTAAATTCCAATGCTAATTT  550

seq1  ATTTGGG-TTTTTTGACCCAAGTAAGGTGTACATTAGCTGTTACTTGAGT  599
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTTTTTTTGACCCAAGTAAGGTGTACATTAGCTGTTACTTGAGT  600

seq1  GTTTCACATTGTCTGGGAGCATTTATAACTATAGACT-GGAAATGTTGTA  648
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTTCACATTGTCTGGGAGCATTTATAACTATAGACTGGGAAATGTTGTA  650

seq1  CAATTCTGACATTCACATAGCACTCTATATTTCAGGAGCATAGGGACATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGACATTCACATAGCACTCTATATTTCAGGAGCATAGGGACATG  700

seq1  ATCTGTATGTTTTATCATGACCTCAAAACCTAGTGC-AATTCCTGACACA  747
      ||||||||| |||||||||||||  ||||||| ||| |||||||||||||
seq2  ATCTGTATG-TTTATCATGACCTTCAAACCTAATGCAAATTCCTGACACA  749

seq1  GAATATAATTGCCAATCAGTAAAACCCCTGAGTACAAGCATTACATT  794
      ||||||||||| |||||||| |||||||||||||| |||||||||||
seq2  GAATATAATTG-CAATCAGT-AAACCCCTGAGTAC-AGCATTACATT  793


seq1: chr18_29696895_29698035
seq2: B6Ng01-203G02.g_62_1191 (reverse)

seq1  TTTTACAGTCTTCT-CAGGACAGTCTTTCAATGGGCT-ACTGGAGTGGTC  48
      |||||| || |||| |||||||||||| | ||||||| |||| || | ||
seq2  TTTTACCGT-TTCTCCAGGACAGTCTTAC-ATGGGCTAACTGAAGGGTTC  48

seq1  AGTGTCTCTGTATGTGCTATTGAAGTTATTCAGCTGGCAGGTCTTCCCAA  98
      || |||||   |||||||| ||||||   ||| ||||||||||| |||| 
seq2  AG-GTCTCGTAATGTGCTA-TGAAGT--ATCAACTGGCAGGTCTACCCA-  93

seq1  GTTTGCTTTCATTTCTCCAGTCTTTAAGGAGGAACCAAAATTACTGAAGT  148
        | |||||||||||||||||  ||||||||||    |||||||||||||
seq2  -GTAGCTTTCATTTCTCCAGTTCTTAAGGAGGA---CAAATTACTGAAGT  139

seq1  CCACTTCTATATAAATTTAACATTTATCTCATTATTCCATA-TCCTCATG  197
      |||| ||||||| ||||| |||||||||||| ||||||||| ||||||||
seq2  CCAC-TCTATAT-AATTTGACATTTATCTCA-TATTCCATATTCCTCATG  186

seq1  CTTACTACAGTGTCCTAACCTCTTTGACATTTCTAATCATCTTGTTATGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTACAGTGTCCTAACCTCTTTGACATTTCTAATCATCTTGTTATGT  236

seq1  CTGTGTATGGAGTTCCCATCTCAGTCCCAGGTTAATGACCACAGTCATCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGGAGTTCCCATCTCAGTCCCAGGTTAATGACCACAGTCATCC  286

seq1  ACACCAGTGATAGAACAGAGATTACTTGATCTTGAAATTTATTTCACTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTGATAGAACAGAGATTACTTGATCTTGAAATTTATTTCACTAA  336

seq1  ATTGTAAATGGCCCATCACTACCTGTCCATTTAAGAGAGATGTTATAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATGGCCCATCACTACCTGTCCATTTAAGAGAGATGTTATAAAA  386

seq1  GAGTAAAAAAGGAATGAATCTGAATAAGAATTGTGATTCCAATCTTTGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAAAAGGAATGAATCTGAATAAGAATTGTGATTCCAATCTTTGAT  436

seq1  TTCAGTTTTTCTACAAGTAGATGTATATAAAACAGCTTAGGGCACCAGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTTCTACAAGTAGATGTATATAAAACAGCTTAGGGCACCAGGG  486

seq1  AGGGATGTTTCTGGTTGGATAATTTGAGATGGGAGTTGAACCCTAAATAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGTTTCTGGTTGGATAATTTGAGATGGGAGTTGAACCCTAAATAT  536

seq1  AGATAATTTGAGGTCCAAAGATCCATTCTAAAGATGGCCTTTATCTTTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTGAGGTCCAAAGATCCATTCTAAAGATGGCCTTTATCTTTTG  586

seq1  GTGGCAGGCCCCATCAAAGGACATGGGAGAAGGAAGCTCTGCTTTCTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGCCCCATCAAAGGACATGGGAGAAGGAAGCTCTGCTTTCTTTC  636

seq1  TACTTGTCCCCCCCTTCACTGGCAAGTTCATCTATCCTTAGCTGTGTCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTCCCCCCCTTCACTGGCAAGTTCATCTATCCTTAGCTGTGTCTC  686

seq1  TACTGGTGTTAAAACTATTTTTCAAGATTTCAATATGGACTTAAAATTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGTTAAAACTATTTTTCAAGATTTCAATATGGACTTAAAATTGG  736

seq1  CAGTTTTTTTATTATCTCCCTAGGAATACAACACCATGTTTTGAATGTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTTTATTATCTCCCTAGGAATACAACACCATGTTTTGAATGTTG  786

seq1  AAGGCATCTGGTCTAGTAGATTTAACAACTAAAGGATTCTTGGATCCTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATCTGGTCTAGTAGATTTAACAACTAAAGGATTCTTGGATCCTTG  836

seq1  GGCTTTCTGTTAGTTGGCAGTTATTGTTGGACTACTTCTACCACAACTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCTGTTAGTTGGCAGTTATTGTTGGACTACTTCTACCACAACTAC  886

seq1  TAAGCCACTCTAATAACTAAATAAATTAATATTTATATGCATATATAGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACTCTAATAACTAAATAAATTAATATTTATATGCATATATAGAT  936

seq1  ATACTGAGGGATAGATAAATATTATACATATTATACATAATATACATATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAGGGATAGATAAATATTATACATATTATACATAATATACATATA  986

seq1  TATATACATAACAAACATTATTAGAGAATACACACATATATATGTATATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATAACAAACATTATTAGAGAATACACACATATATATGTATATA  1036

seq1  TACACCTATACATTATTCCTTCTATCATTGCTTTTCCACAGAGAACCCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTATACATTATTCCTTCTATCATTGCTTTTCCACAGAGAACCCTG  1086

seq1  ACTAATACAAAGTTACTTAAATTGAAGATATTATGAATGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATACAAAGTTACTTAAATTGAAGATATTATGAATGAATTC  1130


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