BAC Information

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BAC

Clone NameB6Ng01-204C02
Chromosome18 (Build37)
Map Location 35,704,358 - 35,704,966
singlet/doubletsinglet
Overlap genenone
Upstream geneWnt8a, Nme5, 4933408B17Rik, Brd8, Kif20a, Cdc23, Gfra3, Cdc25c, LOC100041859, 2810012G03Rik, LOC100041879, LOC100041887, Jmjd1b, Reep2, Egr1, Etf1, Hspa9, LOC100041377, EG626954, LOC100041951, Ctnna1, Lrrtm2, Sil1, LOC100041423, LOC666460, LOC666462, EG383341
Downstream geneEG436583, Matr3, Paip2, Slc23a1, 2010001M09Rik, Gm1614, 5133400G04Rik, Dnajc18, 1110006O17Rik, 1700066B19Rik, 2610307O08Rik, LOC666505, Ube2d2, Cxxc5, LOC100042131, Psd2, LOC100042150, LOC100041531, Pura, 0610010O12Rik, Pfdn1, Hbegf, Slc4a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204C02.bB6Ng01-204C02.g
ACCGA024162GA024163
length609968
definitionB6Ng01-204C02.b B6Ng01-204C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtccagcctgatctacaaagtgacttgcagaccagtcagggc
tacatagtgagacattgtttcaaaaacaaaaacaaaaaaaaaaaacttag
caaaaaattaaatttggtctttctgagtcttgcttatttcacttatatga
ttgccagttttgttgtattgtgaatgtcattacttttgttattctttata
gtggaataaaagtccactatataatatgtgctatgttttccttatccatt
tgtctatggctagttccatatactggctattgagaacagtggagcagtga
gcatggattcgtaaggatctccatgatatgctgacttactatagaattct
ttaggcttctgtcccaggagtgatgcagcaggctcctgtagtaggtctat
ttttatagtttggggaaccttccacgctagattccacagtgctgaatcac
attccaccagcattggttgtatttttcctttctttctatctcaaaaccgt
tttaatttacattttcctgatggctaaggttgttgaacattttctagcca
aatatttattagctatttgcatttcttcctttatgaattgccattttcgg
ggactggag
gaattccatgggagaataagtagaggtcaagataacaaaatataagccat
ctttgggctaatgagctctatgtgggcaatttgtaagtttttttttctat
cagccaattccttttcagtttcagctgatagtcttcttggactaattagt
tctttatcaccttgcagggtttgaaataaattattcagctcttgagtggt
caaatcaattgtaggccaaagccagttaatatctcccagtaatttttaaa
aatcattaagagtatttagctggtctctcctgacttgcaccttttttttt
ttttaagaattatttattataaacaagtacactgtagcagtcttcaggca
taccagaagagggcatcagatctcattatgggtggttgcgagctaccctg
tggttgctgggatttgaactcagggcctttggaagagcagtcagtgctct
tacatgctgagccatctttccagcccctgatttgtgccttttgtggtctc
atttcttgctgatttattctaggtaatcaacaaaatctcctctgtatttc
ttttcaagagtaattagtaatccccaataaggcaatttttttttccttca
tcaaatgtttgttccaaggtatctctatttgaatcagccagcaagatatc
atccatataatggtgaattatggattgaggaaattgtttacaaattattt
ccaatagctgttggtataaggtagtaagcattattcaacagtcctgtggc
aggactttccgttggtaccttttggttggcattgagtggttaaatgtggg
cacctgaaagggaaatctttctttatgtaaggggttgggaaaagcaatcc
tttagctcgatcactatgataggccattccttaggtaatgagggagataa
tgaaattccaggcttgttaaatagcccaatgcttggataattttattgaa
tggctctcagatctgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_35704358_35704966
seq2: B6Ng01-204C02.b_45_653

seq1  GAATTCTAGTCCAGCCTGATCTACAAAGTGACTTGCAGACCAGTCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTCCAGCCTGATCTACAAAGTGACTTGCAGACCAGTCAGGGC  50

seq1  TACATAGTGAGACATTGTTTCAAAAACAAAAACAAAAAAAAAAAACTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTGAGACATTGTTTCAAAAACAAAAACAAAAAAAAAAAACTTAG  100

seq1  CAAAAAATTAAATTTGGTCTTTCTGAGTCTTGCTTATTTCACTTATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTAAATTTGGTCTTTCTGAGTCTTGCTTATTTCACTTATATGA  150

seq1  TTGCCAGTTTTGTTGTATTGTGAATGTCATTACTTTTGTTATTCTTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGTTTTGTTGTATTGTGAATGTCATTACTTTTGTTATTCTTTATA  200

seq1  GTGGAATAAAAGTCCACTATATAATATGTGCTATGTTTTCCTTATCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATAAAAGTCCACTATATAATATGTGCTATGTTTTCCTTATCCATT  250

seq1  TGTCTATGGCTAGTTCCATATACTGGCTATTGAGAACAGTGGAGCAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGGCTAGTTCCATATACTGGCTATTGAGAACAGTGGAGCAGTGA  300

seq1  GCATGGATTCGTAAGGATCTCCATGATATGCTGACTTACTATAGAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATTCGTAAGGATCTCCATGATATGCTGACTTACTATAGAATTCT  350

seq1  TTAGGCTTCTGTCCCAGGAGTGATGCAGCAGGCTCCTGTAGTAGGTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTCTGTCCCAGGAGTGATGCAGCAGGCTCCTGTAGTAGGTCTAT  400

seq1  TTTTATAGTTTGGGGAACCTTCCACGCTAGATTCCACAGTGCTGAATCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGTTTGGGGAACCTTCCACGCTAGATTCCACAGTGCTGAATCAC  450

seq1  ATTCCACCAGCATTGGTTGTATTTTTCCTTTCTTTCTATCTCAAAACCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACCAGCATTGGTTGTATTTTTCCTTTCTTTCTATCTCAAAACCGT  500

seq1  TTTAATTTACATTTTCCTGATGGCTAAGGTTGTTGAACATTTTCTAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTACATTTTCCTGATGGCTAAGGTTGTTGAACATTTTCTAGCCA  550

seq1  AATATTTATTAGCTATTTGCATTTCTTCCTTTATGAATTGCCATTTTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTATTAGCTATTTGCATTTCTTCCTTTATGAATTGCCATTTTCGG  600

seq1  GGACTGGAG  609
      |||||||||
seq2  GGACTGGAG  609