BAC Information

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BAC

Clone NameB6Ng01-205L13
Chromosome18 (Build37)
Map Location 58,752,762 - 58,753,913
singlet/doubletsinglet
Overlap geneSlc27a6
Upstream gene1700011I03Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneIsoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L13.bB6Ng01-205L13.g
ACCGA025327GA025328
length6391,160
definitionB6Ng01-205L13.b B6Ng01-205L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggcacaaaatctaggaaacctgagaccatataaaaaaatctaa
gaataatagaatgaaaagaaggagaggaaacccaggtcaaagacaaagaa
gatatttttaacaaaaccatagaagaaaatattcccagtcttaaaagggg
ggatgccttatcagggttactttttaagcttttggtatacccatatcagt
atccatataactgcagagattatatatctagtaagggactaggagggagg
ggactatttagccagaaaggagaaatagaatatataattatggggagaca
aggaaagaagggagttaagagggaagagggttaaaatgaggagggaaata
gaagagatgggtaaaggagagaattttgggagggacaactaactctaaag
gccatttgaggggccatgtgggaacctactatggcagcttcctagaatat
gaaaatatatatatatgaaaaaatctaaatggagtcactgaaacaatggg
ggaaaatagtgtttcagttcagtatcttttaccacagagcaaagccacca
gtgccaggcatgggttaaatctagttgaatcattggtcaaagggacctgt
aatagttgtatgtgttttagcccagggagtagcactatt

gaattcctctaacacctctagataagagtccagcagtcaacaacctcatt
tcagccaatgtcagcctagagcctccataagaggtaatgcatttgggttt
atatggctacatctgatacatgtatggcagcaatagaaagctaatgagag
gtcattacattagtattggagaataccataaagaaatatggtttactgtt
gttgggtttgggttgctcacatttacaagacttaatttgactcatggtgc
tctgtgtattggcatatttatgccagtcttttagcagattatgtacatct
ttctgattctgtataataaggagtggagttgataggctgttttgcatcca
tgtgtttaacgttaacacctgtcactaaatgcttgatcacagttgtgtta
ctaattaataatctatggccttctatgcaatctgtagagaatctcacttg
ccctgaatccctgccagggttaagtgtaaattttgtaatgctaaaaaaag
cataggtcaatatttttccatatttattatcaacagtgtcatttttattt
ttgtgtctctggtgactaccgatgttcttgctagtgattaggtgcttggt
tggatatatggttcccatttaaccttttgacaaacacctaagcaagaaca
agcaagcagaaatttcataaaactgcaaaaggagccctgaggtcaaatca
gtgtacacagcttacataccccagcacagagcaggtcgtgaacttcaatt
ccctatcacatgtctacagaaaatttctatcctttacagggttccacatg
gaccatgcagagggcagcccagacagatgctgtccatatctgtgtcatga
gtctgtgacagtgcttaagaatgatacccttggagtagagagttcttggg
tcacgttgaaagctactggtagatcagttctttctttatctcaaatttct
ccttatgagagagatgagcctttcttgtattggaatgtaaactctttttc
ttcttgggacccaaaggtcctatagtttttagctgtttttcttacgagaa
tatactttgaagagtaagtctgactatttactgtctatttctattgaaat
tcacttatattttaactcctatgcattccctatttatagcataaacgaat
ggctacatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58752762_58753913
seq2: B6Ng01-205L13.g_70_1229

seq1  GAATTCCTCTAACACCTCTAGATAAGAGTCCAGCAGTCAACAACCTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTAACACCTCTAGATAAGAGTCCAGCAGTCAACAACCTCATT  50

seq1  TCAGCCAATGTCAGCCTAGAGCCTCCATAAGAGGTAATGCATTTGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAATGTCAGCCTAGAGCCTCCATAAGAGGTAATGCATTTGGGTTT  100

seq1  ATATGGCTACATCTGATACATGTATGGCAGCAATAGAAAGCTAATGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTACATCTGATACATGTATGGCAGCAATAGAAAGCTAATGAGAG  150

seq1  GTCATTACATTAGTATTGGAGAATACCATAAAGAAATATGGTTTACTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTACATTAGTATTGGAGAATACCATAAAGAAATATGGTTTACTGTT  200

seq1  GTTGGGTTTGGGTTGCTCACATTTACAAGACTTAATTTGACTCATGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTTTGGGTTGCTCACATTTACAAGACTTAATTTGACTCATGGTGC  250

seq1  TCTGTGTATTGGCATATTTATGCCAGTCTTTTAGCAGATTATGTACATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTATTGGCATATTTATGCCAGTCTTTTAGCAGATTATGTACATCT  300

seq1  TTCTGATTCTGTATAATAAGGAGTGGAGTTGATAGGCTGTTTTGCATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTCTGTATAATAAGGAGTGGAGTTGATAGGCTGTTTTGCATCCA  350

seq1  TGTGTTTAACGTTAACACCTGTCACTAAATGCTTGATCACAGTTGTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAACGTTAACACCTGTCACTAAATGCTTGATCACAGTTGTGTTA  400

seq1  CTAATTAATAATCTATGGCCTTCTATGCAATCTGTAGAGAATCTCACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAATAATCTATGGCCTTCTATGCAATCTGTAGAGAATCTCACTTG  450

seq1  CCCTGAATCCCTGCCAGGGTTAAGTGTAAATTTTGTAATGCTAAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATCCCTGCCAGGGTTAAGTGTAAATTTTGTAATGCTAAAAAAAG  500

seq1  CATAGGTCAATATTTTTCCATATTTATTATCAACAGTGTCATTTTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTCAATATTTTTCCATATTTATTATCAACAGTGTCATTTTTATTT  550

seq1  TTGTGTCTCTGGTGACTACCGATGTTCTTGCTAGTGATTAGGTGCTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTCTGGTGACTACCGATGTTCTTGCTAGTGATTAGGTGCTTGGT  600

seq1  TGGATATATGGTTCCCATTTAACCTTTTGACAAACACCTAAGCAAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATATGGTTCCCATTTAACCTTTTGACAAACACCTAAGCAAGAACA  650

seq1  AGCAAGCAGAAATTTCATAAAACTGCAAAAGGAGCCCTGAGGTCAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAGAAATTTCATAAAACTGCAAAAGGAGCCCTGAGGTCAAATCA  700

seq1  GTGTACACAGCTTACATACCCCAGCACAGAGCAGGTCGTGAACTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACACAGCTTACATACCCCAGCACAGAGCAGGTCGTGAACTTCAATT  750

seq1  -CCTATCACATGTCTACAGAAAATTTCTATCC-TTACAGGG-TCCACATG  797
       ||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  CCCTATCACATGTCTACAGAAAATTTCTATCCTTTACAGGGTTCCACATG  800

seq1  GACCATGCAGAGGGCAGCCCAGACAGATGCTGTCCATATCTGTGTCATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGCAGAGGGCAGCCCAGACAGATGCTGTCCATATCTGTGTCATGA  850

seq1  GTCTGTGACAGTGCTTAAGAATGATACCCTTGGAGTAGAGAGTTC-TGGG  896
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCTGTGACAGTGCTTAAGAATGATACCCTTGGAGTAGAGAGTTCTTGGG  900

seq1  TCACGTTGAAAGGCTACTGGTAGATCAGTTCTTTCTTTATCTCAAATTTC  946
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTGAAA-GCTACTGGTAGATCAGTTCTTTCTTTATCTCAAATTTC  949

seq1  TCC-TATGAGAGAGATGAGGCTTTCCTGGTATGGAATGTAAACTCTTTTT  995
      ||| ||||||||||||||| ||||| ||   |||||||||||||||||||
seq2  TCCTTATGAGAGAGATGAGCCTTTCTTGTATTGGAATGTAAACTCTTTTT  999

seq1  CT--CTGGGACCCAAAGGTCCTATAGTTTTTAGGCTG-TTTTCTACAGAG  1042
      ||   ||||||||||||||||||||||||||| |||| ||||||   |||
seq2  CTTCTTGGGACCCAAAGGTCCTATAGTTTTTA-GCTGTTTTTCTTACGAG  1048

seq1  -ATATACTTGAAAGAGT-AGTCTGACATATTACTGT-TA-TTCTATTAAA  1088
       ||||||||  |||||| ||||||||   ||||||| || ||||||| ||
seq2  AATATACTTTGAAGAGTAAGTCTGACTATTTACTGTCTATTTCTATTGAA  1098

seq1  AATCACATATTATTATAACT-CTATGGCATCCCTATTTATAGGCATAAAA  1137
      | |||| || |||| ||||| |||||   |||||||||||| |||| |||
seq2  ATTCACTTA-TATTTTAACTCCTATGCATTCCCTATTTATA-GCAT-AAA  1145

seq1  CGTATGCCTACATCA  1152
      || ||| ||||||||
seq2  CGAATGGCTACATCA  1160


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