BAC Information

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BAC

Clone NameB6Ng01-205M04
Chromosome18 (Build37)
Map Location 71,162,981 - 71,164,126
singlet/doubletsinglet
Overlap genenone
Upstream geneRab27b, 2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream geneDcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205M04.bB6Ng01-205M04.g
ACCGA025353GA025354
length1,1861,154
definitionB6Ng01-205M04.b B6Ng01-205M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcgaatgctttctccacatctaaggagatgattatgtgttttttgtcttt
gagtttgtttatatagtggatcacattgatggatttccatatattaaacc
atccctgcatctctggaatgaaacctacttggtcaggatggataattgtt
ttgatgggttcttggactcagttagtgagaattttattgagtatttttca
tcaatattcgtaagggaaattgatctgaaattctctatctttgttggatc
ttttcgtggtttaagtatcagagttattatggcttcatagaatgagttgg
gtagagtcccttctgcttctattttgtgtaatagcttgtgaagaactgta
attagaccttctttgaaggtctgatagaactctgcatgaaacccatctgg
tcctgggctttttttgttgggagactattaatgactgctttatttcttta
ggggatataggactgtttagatcattaacctgatcctcatttaactttgg
tacctggtatctgtctagaaatttgtccatttcaaccaggttttccagtt
ttgttgagaatagccttttgtagaaggatctgatggtgttttggatttct
tcaggatctgttgttatgtcttccttttcatttctgattttgttaattag
gatgctatccctgtgccctctagtgagtctggctaagggtttatctatct
tgttcgttttctcaaagaaccagctcctcgtttggttgatttttttgaat
aattcttcttgtttccacttggttgatttttgtccctgagtttgattatg
tcctgccatctactcctcttgggttaatttgcttccttttgttctagagc
ttttaagttgtgtttgtcaagcttgctagtgtgtgctctctctagtttct
tctgttagcctctatcagcagacctgggatagtagttctcctccctctga
gtttgagtgtcagagcacttctctgcatgttagctcttcctccttacagg
gataggtgcacacagaatatctttgctttcggaacttccctccttactcg
aaatgaaagtcctgatttcaggatctgttccagaagccgtgtgtttgctt
ccatcctgttcaccagtaaactcgttatgccattct

gaattcactctaccaatgaactggtggcctgtagctgatcattggcgaca
tcctttacttatcttccttctttgttttcactcattcttttgcattggga
atgagttcatagtctcattcatgctgtgcaaacactctacttagcatatc
taggaaaccatcagtcagttctttttgttgtttttgctgttgttgtttta
agatgaggtcttgctaaagaatccatgttagccttcaacatgggatcccc
ctgcttcaggttctggagtagctacgattatattctgtaccatcatccct
ggttcccatatttcatttttggtttttgttgaaaaaaaatcttgcaatat
atctccaaaaatccatgcatagaaaatgtttcaaaataactttattggtc
taaactattgggtttttttgaactttccataattaaatttgtcttggaca
aaaatgttctagcctgaaaatcaccctttcctttgcattttgaaggtatt
tttgattttgtcagtgttaggagcattttgggggatgcagaggtttgaag
aggtgatcctggtgcaatggtttacctcctgtcctctcatctttatacta
ctctgaattttcagtgataccctttgtatgtttcagccttgctaattgtg
ctgaggatatttcaagtctgtttctatctagaaatgcatatccatctttt
tttttaaaaaagtttgcgggcattatttttatgatatatttccttctcag
tgataccgactgataaggccactgtttattagcactgtaagcctgatctt
ccccttttttttcttcttgaggttcattcctggcagattttcttgacttt
tcacactcagtccaactgaattaattacttcctaaaaggatattagagaa
tgctgtgtgtttattgtaaagaaagcatactttgtctctcaggatagtag
tattttattttaatgattgcttccattctggatcatgggtagatcctcca
agcctaattagttcatggtttttgctttcttcatatgcctttcagatctg
aaatattggctttcaaaccttcaccatttaaaagcctcagtaatttaaaa
gagcaatttcaaggtgtaccgcagttgcattcagtaaccactgtaagtct
ggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71162981_71164126
seq2: B6Ng01-205M04.g_67_1220

seq1  GAATTCACTCTACCAATGAACTGGTGGCCTGTAGCTGATCATTGGCGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTACCAATGAACTGGTGGCCTGTAGCTGATCATTGGCGACA  50

seq1  TCCTTTACTTATCTTCCTTCTTTGTTTTCACTCATTCTTTTGCATTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACTTATCTTCCTTCTTTGTTTTCACTCATTCTTTTGCATTGGGA  100

seq1  ATGAGTTCATAGTCTCATTCATGCTGTGCAAACACTCTACTTAGCATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTCATAGTCTCATTCATGCTGTGCAAACACTCTACTTAGCATATC  150

seq1  TAGGAAACCATCAGTCAGTTCTTTTTGTTGTTTTTGCTGTTGTTGTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAACCATCAGTCAGTTCTTTTTGTTGTTTTTGCTGTTGTTGTTTTA  200

seq1  AGATGAGGTCTTGCTAAAGAATCCATGTTAGCCTTCAACATGGGATCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGTCTTGCTAAAGAATCCATGTTAGCCTTCAACATGGGATCCCC  250

seq1  CTGCTTCAGGTTCTGGAGTAGCTACGATTATATTCTGTACCATCATCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCAGGTTCTGGAGTAGCTACGATTATATTCTGTACCATCATCCCT  300

seq1  GGTTCCCATATTTCATTTTTGGTTTTTGTTGAAAAAAAATCTTGCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCATATTTCATTTTTGGTTTTTGTTGAAAAAAAATCTTGCAATAT  350

seq1  ATCTCCAAAAATCCATGCATAGAAAATGTTTCAAAATAACTTTATTGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAAAATCCATGCATAGAAAATGTTTCAAAATAACTTTATTGGTC  400

seq1  TAAACTATTGGGTTTTTTTGAACTTTCCATAATTAAATTTGTCTTGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATTGGGTTTTTTTGAACTTTCCATAATTAAATTTGTCTTGGACA  450

seq1  AAAATGTTCTAGCCTGAAAATCACCCTTTCCTTTGCATTTTGAAGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCTAGCCTGAAAATCACCCTTTCCTTTGCATTTTGAAGGTATT  500

seq1  TTTGATTTTGTCAGTGTTAGGAGCATTTTGGGGGATGCAGAGGTTTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTGTCAGTGTTAGGAGCATTTTGGGGGATGCAGAGGTTTGAAG  550

seq1  AGGTGATCCTGGTGCAATGGTTTACCTCCTGTCCTCTCATCTTTATACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATCCTGGTGCAATGGTTTACCTCCTGTCCTCTCATCTTTATACTA  600

seq1  CTCTGAATTTTCAGTGATACCCTTTGTATGTTTCAGCCTTGCTAATTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATTTTCAGTGATACCCTTTGTATGTTTCAGCCTTGCTAATTGTG  650

seq1  CTGAGGATATTTCAAGTCTG-TTCTATCTAGAAATGCATATCCATCTTTT  699
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGAGGATATTTCAAGTCTGTTTCTATCTAGAAATGCATATCCATCTTTT  700

seq1  TTTTTAAAAAAGTTTGCGGGCATTATTTTTATGATATATTTCCTTCTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAAGTTTGCGGGCATTATTTTTATGATATATTTCCTTCTCAG  750

seq1  TGATACCGACTGATAAGGCCACTGTTTATTAGCACTGTAAGCCTGATCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCGACTGATAAGGCCACTGTTTATTAGCACTGTAAGCCTGATCTT  800

seq1  CCCC-TTTTTTTCTTCTTGAGGTTCATTCCTGGCAGATTTTCTTGACTTT  848
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTTTTTCTTCTTGAGGTTCATTCCTGGCAGATTTTCTTGACTTT  850

seq1  TCACACTCAGTCCAACTGAATTAATTACTTCCTAAAAGGATATTTAGAGA  898
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCACACTCAGTCCAACTGAATTAATTACTTCCTAAAAGGATA-TTAGAGA  899

seq1  ATGCTGTGTGTTTATTGTAAAGAAAGCATACTTTTGTCTCTCAGGATAGT  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGCTGTGTGTTTATTGTAAAGAAAGCATAC-TTTGTCTCTCAGGATAGT  948

seq1  AGTATTTTATTTTAATGATTGC-TCCATTCTGGATCATGGGTAGATCCTC  997
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTATTTTATTTTAATGATTGCTTCCATTCTGGATCATGGGTAGATCCTC  998

seq1  CAAGCTAATTTAGTTTCATGG-TTTTGCTTTCTTC-TATGCCTTTCAG-T  1044
      |||||  | |||| ||||||| ||||||||||||| |||||||||||| |
seq2  CAAGCCTAATTAG-TTCATGGTTTTTGCTTTCTTCATATGCCTTTCAGAT  1047

seq1  CTG-AATAATGGCTTCAAACCCTTCA-CATTTAAAAG-CTCAGT-ATTTA  1090
      ||| |||| ||||||  || |||||| |||||||||| |||||| |||||
seq2  CTGAAATATTGGCTTTCAAACCTTCACCATTTAAAAGCCTCAGTAATTTA  1097

seq1  AAAGAGC-ATTTCAA-GTGTTACGCATGTGGATTCAGTAACCACTGTAAA  1138
      ||||||| ||||||| ||||  ||||  || |||||||||||||||| ||
seq2  AAAGAGCAATTTCAAGGTGTACCGCAGTTGCATTCAGTAACCACTGT-AA  1146

seq1  GCCTGGTG  1146
      | ||||||
seq2  GTCTGGTG  1154


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