BAC Information

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BAC

Clone NameB6Ng01-206A03
Chromosome18 (Build37)
Map Location 86,435,304 - 86,436,369
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665382, LOC545269, LOC545270, LOC665402
Downstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206A03.b
ACCGA025538
length1,063
definitionB6Ng01-206A03.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgcttcaacatcacaaccaaggagagggttccatcactttca
aagctatggagttactactgttggaggctttcagatttccaactaaatta
aagcagaacaaatgagtttgaagtctgaaagttgccatgtgatgtctttc
tcagtagacctacactgtatgtattcaggtgatctctctgggtgagtctg
gagctcattgactaggctagcgattagttttccctgatgatcttctgcct
cggcttcatgctcaacctgtatgtgggttctggggaactgaacttttatt
ttatgttaatgatgcaagcactttatccacgaaaccatttcccaatacca
gtacatactatacttcttaaaaatggttacaaaagagttcatgtataatt
tcagccattaaaacacattgttccatacagaaaatacttacataatatta
cagtttacatttttgttctctgaacatcttgtatcagccattttaagttg
actctttgctcccttattactgtttgatagttctgtgtgaacaattgcca
atattagtttaaaggagccactttattttctttatataaaacatgcatat
ccatctgcgatgtgttgcctgacattaccagaaaaagagctgcacataca
ttaattattctgcaaagccggtggtctacttagaattgtgactgtggtga
gttggaattatgcacatccaagggcaagtttctttgggctatcatcgctc
cttaaataggcatttattacccacctctgtgtgatctaaaatccttatga
ttattggataaatgtattaagtattataaatttgaaagtatttactattt
gttttacatgtgtgtcttatttatgtatgtgggtttctgcacatggggtt
ggatttgcatggagtacatatggtggtcagaggacaattttttttcagag
ctgatgaccaaacccaggtccttatgcttgctagcagtgttctacactga
gctatattcccagcccacgaagaataatttttaagagttgattcctcttt
atgtagatctgga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86435304_86436369
seq2: B6Ng01-206A03.b_46_1108 (reverse)

seq1  TCCAGATCCTACATAAAGA-GAATCAACTCTTTAAAATTATCCTCTGTGG  49
      ||||||| ||||||||||| |||||||||||| |||||||| ||  || |
seq2  TCCAGAT-CTACATAAAGAGGAATCAACTCTTAAAAATTATTCTTCGT-G  48

seq1  GGCTGGGAATTTAGCTCAGTGGTAGAACACTTGCCTAGCAAGCATAAGGA  99
      |||||||||| ||||||||| ||||||||||   ||||||||||||||||
seq2  GGCTGGGAATATAGCTCAGT-GTAGAACACT--GCTAGCAAGCATAAGGA  95

seq1  CCTGGGTTTGGTCCTCAGCTCTGAAAAAAAAATTGTCCTCTGACCACCAT  149
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  CCTGGGTTTGGTCATCAGCTCTG-AAAAAAAATTGTCCTCTGACCACCAT  144

seq1  ATGTACTCCATGCAATTCC-ACCCCATGTGCAGAAACCCACATACATAAA  198
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  ATGTACTCCATGCAAATCCAACCCCATGTGCAGAAACCCACATACATAAA  194

seq1  TAAGACACACATGTAAAAC-AATAGTAAATACTTTCAAATTTATAATACT  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAGACACACATGTAAAACAAATAGTAAATACTTTCAAATTTATAATACT  244

seq1  TAATACATTTATCCAATAATCATAAGGATTTTAGATCACACAGAGGTGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATTTATCCAATAATCATAAGGATTTTAGATCACACAGAGGTGGG  294

seq1  TAATAAATGCCTATTTAAGGAGCGATGATAGCCCAAAGAAACTTGCCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATGCCTATTTAAGGAGCGATGATAGCCCAAAGAAACTTGCCCTT  344

seq1  GGATGTGCATAATTCCAACTCACCACAGTCACAATTCTAAGTAGACCACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGCATAATTCCAACTCACCACAGTCACAATTCTAAGTAGACCACC  394

seq1  GGCTTTGCAGAATAATTAATGTATGTGCAGCTCTTTTTCTGGTAATGTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCAGAATAATTAATGTATGTGCAGCTCTTTTTCTGGTAATGTCA  444

seq1  GGCAACACATCGCAGATGGATATGCATGTTTTATATAAAGAAAATAAAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACACATCGCAGATGGATATGCATGTTTTATATAAAGAAAATAAAGT  494

seq1  GGCTCCTTTAAACTAATATTGGCAATTGTTCACACAGAACTATCAAACAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTTAAACTAATATTGGCAATTGTTCACACAGAACTATCAAACAG  544

seq1  TAATAAGGGAGCAAAGAGTCAACTTAAAATGGCTGATACAAGATGTTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGGGAGCAAAGAGTCAACTTAAAATGGCTGATACAAGATGTTCAG  594

seq1  AGAACAAAAATGTAAACTGTAATATTATGTAAGTATTTTCTGTATGGAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAATGTAAACTGTAATATTATGTAAGTATTTTCTGTATGGAAC  644

seq1  AATGTGTTTTAATGGCTGAAATTATACATGAACTCTTTTGTAACCATTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTTAATGGCTGAAATTATACATGAACTCTTTTGTAACCATTTT  694

seq1  TAAGAAGTATAGTATGTACTGGTATTGGGAAATGGTTTCGTGGATAAAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTATAGTATGTACTGGTATTGGGAAATGGTTTCGTGGATAAAGT  744

seq1  GCTTGCATCATTAACATAAAATAAAAGTTCAGTTCCCCAGAACCCACATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCATCATTAACATAAAATAAAAGTTCAGTTCCCCAGAACCCACATA  794

seq1  CAGGTTGAGCATGAAGCCGAGGCAGAAGATCATCAGGGAAAACTAATCGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGAGCATGAAGCCGAGGCAGAAGATCATCAGGGAAAACTAATCGC  844

seq1  TAGCCTAGTCAATGAGCTCCAGACTCACCCAGAGAGATCACCTGAATACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGTCAATGAGCTCCAGACTCACCCAGAGAGATCACCTGAATACA  894

seq1  TACAGTGTAGGTCTACTGAGAAAGACATCACATGGCAACTTTCAGACTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTAGGTCTACTGAGAAAGACATCACATGGCAACTTTCAGACTTC  944

seq1  AAACTCATTTGTTCTGCTTTAATTTAGTTGGAAATCTGAAAGCCTCCAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATTTGTTCTGCTTTAATTTAGTTGGAAATCTGAAAGCCTCCAAC  994

seq1  AGTAGTAACTCCATAGCTTTGAAAGTGATGGAACCCTCTCCTTGGTTGTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAACTCCATAGCTTTGAAAGTGATGGAACCCTCTCCTTGGTTGTG  1044

seq1  ATGTTGAAGCAATGAATTC  1066
      |||||||||||||||||||
seq2  ATGTTGAAGCAATGAATTC  1063


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