BAC Information

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BAC

Clone NameB6Ng01-206E05
Chromosome18 (Build37)
Map Location 32,910,540 - 33,006,226
singlet/doubletdoublet
Overlap geneTslp, Wdr36
Upstream geneAmmecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170
Downstream geneCamk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258, Epb4.1l4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206E05.bB6Ng01-206E05.g
ACCGA025723GA025724
length1,0281,166
definitionB6Ng01-206E05.b B6Ng01-206E05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,910,540 - 32,911,171)(33,005,041 - 33,006,226)
sequence
gaattctgcatgccccacaccatgtaatgaatgtggtgaatgtctgcact
taactttcaaataataattttcagtcttaagaagtaattttacttcttca
gttataaattgattgtggtttaaaaaaaaatccagccttcttgtttccat
atgcgtccagagctgatcctgtgccacagcgctccaaactcaaatactgc
caggagagagctggtctcccaggagtgctgacacacagacttgcaggaca
gacaaaccatagtcagagacagcaagagcagctaacaccagagataacca
gatggcaagaggcaagggcaagaacataagcaacagaaaccaaggaagaa
atgaaagactttagaatttcatgaaaatgaaggcacatcataacaaaact
tataggacacaataaaagcagtgctaagaggaaaactcagagctctgagt
gcctccaagaagaaactggagagagcatacactaccagcttaatagcata
cctgaaagctctagaacaaaaagaagcatatacacccaacaggagtagac
agcaggaaataatcaaactcaaggatgaaatcaaccaaatagaaacaaaa
agaactatacaaagaatcaacaaaaacaggagctgatactttgagaaaat
caccaagatagctaaactcttagccagactaaccacagggcacaaagaca
gtatccaaattaacaaaatcagaaaatgaaaagggagatataacaacaga
aactgaggaaattcaaaagatcattagatcctactacaaaatcctctatt
caacaaaattggaaaatctggattaaatgaatatttttctagacagatac
caaataccaaagttaaatcaggatcagataaaccatctaaacagtctctt
atcccctagagaaatagaagcagtcattaaaagtctcccaacccaaaaag
cccaggaccagatgcgtttagtgcagaatgctatcagaccttcaaagaag
acctaataccaatactcttcaaactact
gaattcactaccgtttctgactacaagagctggggagaaaggtcaaatct
taaaaacatggaaagccttgccacaaacatggaaacctgagtagccagct
ttatcaaaagaaaataggaaaaacctagaaaacatgctaatgtttcataa
ttagtctgttccaacattaacagccaatgattataatggtctaacagaga
aggcttcacttacaagttttggtcttagcacagatgaatattcagtataa
ttatgcaatgagtcaggccatacatttctttaatagtctattaagtgcct
actacacgctagactctagaaactaaggataacaaaacaaacaggatcct
tgccctcctgatacttcctggagtcttcaggggatatcatcagaacagaa
caaattaaatggtggaacgcaaataaactgaactggggcaagcagtgcat
attttaaaaaacgaaagctataccagcagatagtctgcagatgcacacca
tgcacacacttggctgactaaacacggaaacaaaagcagctgtttatgga
catctaccatctaatagacatcagaatttggtcccaattatttcaatagg
aaagttcaatatcctgataaattcctctgtatggcccacagtctcacttc
taccatagttatttctgttctacataaggcactcaatgacatgctcacaa
ataaaatcactaggaaattccaagcacgtaagattacacaaacctttcta
gcaaaggcatttcttattttcagttaagtttctagaacactatttcattc
tgggtaatagtttaaaggaaacaaagctaagtgttaatgcttatttaagt
ctaaaaacattgatattctaggaaagtaagagtgtctccttctagccttc
tttcttccttagttaaaaagtactaacctgttgaagagctgtcacctcca
actttccaccctggaaatgtatatagagcttactataaaggagaagagag
aaaacatttttaagaaaacaaaatcactacgtatttaataaagtaacagt
gctgtttatcattttacttttgatcagggatactatctttttaagatact
tactctaggtatgtaggtgtttgctgcacggtaatatatctctatggtac
caatggtgtgcagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32910540_32911171
seq2: B6Ng01-206E05.b_47_678

seq1  GAATTCTGCATGCCCCACACCATGTAATGAATGTGGTGAATGTCTGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATGCCCCACACCATGTAATGAATGTGGTGAATGTCTGCACT  50

seq1  TAACTTTCAAATAATAATTTTCAGTCTTAAGAAGTAATTTTACTTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCAAATAATAATTTTCAGTCTTAAGAAGTAATTTTACTTCTTCA  100

seq1  GTTATAAATTGATTGTGGTTTAAAAAAAAATCCAGCCTTCTTGTTTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATTGATTGTGGTTTAAAAAAAAATCCAGCCTTCTTGTTTCCAT  150

seq1  ATGCGTCCAGAGCTGATCCTGTGCCACAGCGCTCCAAACTCAAATACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTCCAGAGCTGATCCTGTGCCACAGCGCTCCAAACTCAAATACTGC  200

seq1  CAGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACAGACTTGCAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGAGCTGGTCTCCCAGGAGTGCTGACACACAGACTTGCAGGACA  250

seq1  GACAAACCATAGTCAGAGACAGCAAGAGCAGCTAACACCAGAGATAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACCATAGTCAGAGACAGCAAGAGCAGCTAACACCAGAGATAACCA  300

seq1  GATGGCAAGAGGCAAGGGCAAGAACATAAGCAACAGAAACCAAGGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAAGAGGCAAGGGCAAGAACATAAGCAACAGAAACCAAGGAAGAA  350

seq1  ATGAAAGACTTTAGAATTTCATGAAAATGAAGGCACATCATAACAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGACTTTAGAATTTCATGAAAATGAAGGCACATCATAACAAAACT  400

seq1  TATAGGACACAATAAAAGCAGTGCTAAGAGGAAAACTCAGAGCTCTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGACACAATAAAAGCAGTGCTAAGAGGAAAACTCAGAGCTCTGAGT  450

seq1  GCCTCCAAGAAGAAACTGGAGAGAGCATACACTACCAGCTTAATAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAAGAAGAAACTGGAGAGAGCATACACTACCAGCTTAATAGCATA  500

seq1  CCTGAAAGCTCTAGAACAAAAAGAAGCATATACACCCAACAGGAGTAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAGCTCTAGAACAAAAAGAAGCATATACACCCAACAGGAGTAGAC  550

seq1  AGCAGGAAATAATCAAACTCAAGGATGAAATCAACCAAATAGAAACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAATAATCAAACTCAAGGATGAAATCAACCAAATAGAAACAAAA  600

seq1  AGAACTATACAAAGAATCAACAAAAACAGGAG  632
      ||||||||||||||||||||||||||||||||
seq2  AGAACTATACAAAGAATCAACAAAAACAGGAG  632

seq1: chr18_33005041_33006226
seq2: B6Ng01-206E05.g_63_1228 (reverse)

seq1  GCACTGCACACATGGGGTACACATAGAGATATATATAACGTGCAGGCAAA  50
      |||||||||||    ||||| ||||||||||||| || |||||||   ||
seq2  GCACTGCACACCATTGGTAC-CATAGAGATATAT-TACCGTGCAG--CAA  46

seq1  ACACCTACATACTTAAGAGTAAAGTATCCTTTAAAAAAAGGATAGTATCC  100
      |||||||||||| | ||||| |||||||  |||||||   ||||||||||
seq2  ACACCTACATACCT-AGAGT-AAGTATC--TTAAAAA---GATAGTATCC  89

seq1  CTTGATCAAAAAGTAAAAATGATAAAACAGCACCTGTTACTTTTATTAAA  150
      | ||||| |||||| |||||||| |||||||| ||||||| |||||||||
seq2  C-TGATC-AAAAGT-AAAATGAT-AAACAGCA-CTGTTAC-TTTATTAAA  133

seq1  TACGTAGTTGATTTTGTTTTTCTTAAAAATGTTTTCTCTCTTTCTCCTTT  200
      ||||||| |||||||| ||||||||||||||||||||||| |||||||||
seq2  TACGTAG-TGATTTTG-TTTTCTTAAAAATGTTTTCTCTC-TTCTCCTTT  180

seq1  ATAGTAAGCTTCTATATACATTTCCAGGGTGGAAAGTTGGA-GTGACAGC  249
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  ATAGTAAGC-TCTATATACATTTCCAGGGTGGAAAGTTGGAGGTGACAGC  229

seq1  TCTTCAACAGGTTAGTACTTTTTAACTAAGGAAGAAAGAAGGCTAGAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAACAGGTTAGTACTTTTTAACTAAGGAAGAAAGAAGGCTAGAAGG  279

seq1  AGACACTCTTACTTTCCTAGAATATCAATGTTTTTAGACTTAAATAAGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTCTTACTTTCCTAGAATATCAATGTTTTTAGACTTAAATAAGCA  329

seq1  TTAACACTTAGCTTTGTTTCCTTTAAACTATTACCCAGAATGAAATAGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTTAGCTTTGTTTCCTTTAAACTATTACCCAGAATGAAATAGTG  379

seq1  TTCTAGAAACTTAACTGAAAATAAGAAATGCCTTTGCTAGAAAGGTTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAACTTAACTGAAAATAAGAAATGCCTTTGCTAGAAAGGTTTGT  429

seq1  GTAATCTTACGTGCTTGGAATTTCCTAGTGATTTTATTTGTGAGCATGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTTACGTGCTTGGAATTTCCTAGTGATTTTATTTGTGAGCATGTC  479

seq1  ATTGAGTGCCTTATGTAGAACAGAAATAACTATGGTAGAAGTGAGACTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTGCCTTATGTAGAACAGAAATAACTATGGTAGAAGTGAGACTGT  529

seq1  GGGCCATACAGAGGAATTTATCAGGATATTGAACTTTCCTATTGAAATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATACAGAGGAATTTATCAGGATATTGAACTTTCCTATTGAAATAA  579

seq1  TTGGGACCAAATTCTGATGTCTATTAGATGGTAGATGTCCATAAACAGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACCAAATTCTGATGTCTATTAGATGGTAGATGTCCATAAACAGCT  629

seq1  GCTTTTGTTTCCGTGTTTAGTCAGCCAAGTGTGTGCATGGTGTGCATCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTTTCCGTGTTTAGTCAGCCAAGTGTGTGCATGGTGTGCATCTG  679

seq1  CAGACTATCTGCTGGTATAGCTTTCGTTTTTTAAAATATGCACTGCTTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATCTGCTGGTATAGCTTTCGTTTTTTAAAATATGCACTGCTTGC  729

seq1  CCCAGTTCAGTTTATTTGCGTTCCACCATTTAATTTGTTCTGTTCTGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCAGTTTATTTGCGTTCCACCATTTAATTTGTTCTGTTCTGATG  779

seq1  ATATCCCCTGAAGACTCCAGGAAGTATCAGGAGGGCAAGGATCCTGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCTGAAGACTCCAGGAAGTATCAGGAGGGCAAGGATCCTGTTTG  829

seq1  TTTTGTTATCCTTAGTTTCTAGAGTCTAGCGTGTAGTAGGCACTTAATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTATCCTTAGTTTCTAGAGTCTAGCGTGTAGTAGGCACTTAATAG  879

seq1  ACTATTAAAGAAATGTATGGCCTGACTCATTGCATAATTATACTGAATAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAAGAAATGTATGGCCTGACTCATTGCATAATTATACTGAATAT  929

seq1  TCATCTGTGCTAAGACCAAAACTTGTAAGTGAAGCCTTCTCTGTTAGACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTGCTAAGACCAAAACTTGTAAGTGAAGCCTTCTCTGTTAGACC  979

seq1  ATTATAATCATTGGCTGTTAATGTTGGAACAGACTAATTATGAAACATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATCATTGGCTGTTAATGTTGGAACAGACTAATTATGAAACATTA  1029

seq1  GCATGTTTTCTAGGTTTTTCCTATTTTCTTTTGATAAAGCTGGCTACTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTTCTAGGTTTTTCCTATTTTCTTTTGATAAAGCTGGCTACTCA  1079

seq1  GGTTTCCATGTTTGTGGCAAGGCTTTCCATGTTTTTAAGATTTGACCTTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCATGTTTGTGGCAAGGCTTTCCATGTTTTTAAGATTTGACCTTT  1129

seq1  CTCCCCAGCTCTTGTAGTCAGAAACGGTAGTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCTCTTGTAGTCAGAAACGGTAGTGAATTC  1166