BAC Information

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BAC

Clone NameB6Ng01-207L21
Chromosome18 (Build37)
Map Location 14,954,482 - 14,955,537
singlet/doubletsinglet
Overlap geneTaf4b
Upstream geneZfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8
Downstream geneLOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9, LOC670012
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207L21.bB6Ng01-207L21.g
ACCGA026809GA026810
length1,1501,066
definitionB6Ng01-207L21.b B6Ng01-207L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggtcaagaaacacagaagggggagaaagcagaatcaccatgc
cagaaaaggaataagatccaggcttgaggctgcagaagagaaagcataca
atcatgtaagagccagggaagcacagccccaggccctcacctaactgagt
ctagggtagtaaaaatgagatatagatattagtaagtaataattcaggat
tatcagaagagaggtatttgcaatgtggatgtttgggatccacaaacagc
catcgagctgattaacacatattaaatgaaaggctacttggcaggatcct
tccagtttccatgtgcgctctggagctgaccctgtgccacagctctccat
tcccaaatccctccgggagagagctggtctcctaggagtgctgacacaac
tatgggcacaggtgagaccacaacttctattcaaatacctacctgaagag
ggatcctcccagagccatcaggacacaggaaccatgaaacagcaagggac
aggatccttccggtttccatcaggtctgcaatccatacacaaattccacc
cggacagagctgatctcccaggagtgttggcacacaggcttacaggaaga
acatgtcacaatcactgacagcaagaccaaccaacaccacacataaccag
atggcgagaggcaagaagaacaaaataagaaacagaacccaaggctactt
ggcatcatcagtacccagttctcccaccacagcaagccctggttacccaa
acacaccagaaaagcaagactctgattcaaaaatcacatattgtgatgat
gatagaggactttaagaaggacataaataactcccttgaggaaatacagg
agaacacaggtaaataggtagaagcccttaagagaaaaacacaaaagtcc
cttaaagaattacaggaaacacaaccaaacaggtgaagggaattggacaa
accatttaggatctaaaaatggaaataggaacattaaagaatcagaaatg
gagacatcctggagatggaaaacctagaaagagattcaggatcatagatg
caagcatcacctaaagatatccagagacggaagagatatctcaggtgccg
aagattccatagaaacctggacataaacaggtctaggaaattcactatgc

gaattctgggaaggaaaagagcattatcttatggtgaggtgagcctgttt
tgctctggaaggcccttacaagatccttattccacccaatggagttaact
cttaagggacatggtatgtctctacctaggtagattccattctttactat
aacagtgttatgcttgtactgttttggattttggagcatattgaatgctt
tcatagtttcaggttaaagatgttctggaaaatctatgtaaatattctaa
aattttgaaatagccattttgatgagggatgcccaatctgtatgacatgt
cttgtttgagcagcttatgtagtatttatctgttcctatatcatctttaa
aaagattttgttttatgtgtatgattgttttgcctgcgtcttttgtctgt
gcaccacttgtgtgcagtgttttcagaggcctgaagacagcatcatttcc
caggaactggagttcaagagagggttgtaggactccacatgggtacgggg
aatagaacagtcctctgcaaaagtaccaagtactgctgagccagcctctg
tccatcttaatgtagtactgtagggtcagcatcatgaagggaaagtattg
accttcaggagtgtcttttcttaggcatagatttaaaaatattttttata
gctaatttttttaaagacaggctcttactatatacccccatctggccttg
agcctgtattcctttaggctcagcttcctagtcctagaattacaggtttg
tgctgcatgctcagcttaagtagctttgaatgaaaacattttattatctt
atagtaaatagtgaacatggagtttattatatgttaggcattttattcat
ttcccagtgttgaaatgggaaacaacagtgtgcgatgtttgtgttttatt
ttaatagtttcagagtcaccattgtttttctttaattaataggaacagtt
tttgatcaaaagtaacagtgggtcagttgatgcttggtatcgcctcagca
agctgttaccaggagccaagacacaagttaacattaacttccaggaccag
cagttacctagcaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14954482_14955537
seq2: B6Ng01-207L21.g_65_1130

seq1  GAATTCTGGGAAGGAAAAGAGCATTATCTTATGGTGAGGTGAGCCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGAAAAGAGCATTATCTTATGGTGAGGTGAGCCTGTTT  50

seq1  TGCTCTGGAAGGCCCTTACAAGATCCTTATTCCACCCAATGGAGTTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGAAGGCCCTTACAAGATCCTTATTCCACCCAATGGAGTTAACT  100

seq1  CTTAAGGGACATGGTATGTCTCTACCTAGGTAGATTCCATTCTTTACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGGACATGGTATGTCTCTACCTAGGTAGATTCCATTCTTTACTAT  150

seq1  AACAGTGTTATGCTTGTACTGTTTTGGATTTTGGAGCATATTGAATGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTTATGCTTGTACTGTTTTGGATTTTGGAGCATATTGAATGCTT  200

seq1  TCATAGTTTCAGGTTAAAGATGTTCTGGAAAATCTATGTAAATATTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTTCAGGTTAAAGATGTTCTGGAAAATCTATGTAAATATTCTAA  250

seq1  AATTTTGAAATAGCCATTTTGATGAGGGATGCCCAATCTGTATGACATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAAATAGCCATTTTGATGAGGGATGCCCAATCTGTATGACATGT  300

seq1  CTTGTTTGAGCAGCTTATGTAGTATTTATCTGTTCCTATATCATCTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTGAGCAGCTTATGTAGTATTTATCTGTTCCTATATCATCTTTAA  350

seq1  AAAGATTTTGTTTTATGTGTATGATTGTTTTGCCTGCGTCTTTTGTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTTGTTTTATGTGTATGATTGTTTTGCCTGCGTCTTTTGTCTGT  400

seq1  GCACCACTTGTGTGCAGTGTTTTCAGAGGCCTGAAGACAGCATCATTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACTTGTGTGCAGTGTTTTCAGAGGCCTGAAGACAGCATCATTTCC  450

seq1  CAGGAACTGGAGTTCAAGAGAGGGTTGTAGGACTCCACATGGGTACGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTGGAGTTCAAGAGAGGGTTGTAGGACTCCACATGGGTACGGGG  500

seq1  AATAGAACAGTCCTCTGCAAAAGTACCAAGTACTGCTGAGCCAGCCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACAGTCCTCTGCAAAAGTACCAAGTACTGCTGAGCCAGCCTCTG  550

seq1  TCCATCTTAATGTAGTACTGTAGGGTCAGCATCATGAAGGGAAAGTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTAATGTAGTACTGTAGGGTCAGCATCATGAAGGGAAAGTATTG  600

seq1  ACCTTCAGGAGTGTCTTTTCTTAGGCATAGATTTAAAAATATTTTTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGGAGTGTCTTTTCTTAGGCATAGATTTAAAAATATTTTTTATA  650

seq1  GCTAATTTTTTTAAAGACAGGCTCTTACTATATACCCCCATCTGGCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTTTTTTAAAGACAGGCTCTTACTATATACCCCCATCTGGCCTTG  700

seq1  AGCCTGTATTCCTTTAGGCTCAGCTTCCTAGTCCTAGAATTACAGGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTATTCCTTTAGGCTCAGCTTCCTAGTCCTAGAATTACAGGTTTG  750

seq1  TGCTGCATGCTCAGCTTAAGTAGCTTTGAATGAAAACATTTTATTATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATGCTCAGCTTAAGTAGCTTTGAATGAAAACATTTTATTATCTT  800

seq1  ATAGTAAATAGTGAACATGGAGTTTATTATATGTTAGGCA-TTTATTCAT  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATAGTAAATAGTGAACATGGAGTTTATTATATGTTAGGCATTTTATTCAT  850

seq1  TTCCCAGTGTTGAAATGGGAAACAACAGTGTGCGATGTTTGTGTTTTA-T  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCCCAGTGTTGAAATGGGAAACAACAGTGTGCGATGTTTGTGTTTTATT  900

seq1  TTAATAGTTTCAGAGTCACCATTGTTTTTCTTTTAATTATAGGAACAG-T  947
      ||||||||||||||||||||||||||||||||| | | |||||||||| |
seq2  TTAATAGTTTCAGAGTCACCATTGTTTTTCTTTAATTAATAGGAACAGTT  950

seq1  TTTGATCAAAAGTAACAGT-GGTCAGTTGATGC-TGGTATCGCCTCAGCA  995
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TTTGATCAAAAGTAACAGTGGGTCAGTTGATGCTTGGTATCGCCTCAGCA  1000

seq1  AGCTG-TAACAGGAGCCAAGACCACAAG-TAACA-TAAC-TCCAAGACCA  1041
      ||||| || |||||||||||| |||||| ||||| |||| |||| |||||
seq2  AGCTGTTACCAGGAGCCAAGA-CACAAGTTAACATTAACTTCCAGGACCA  1049

seq1  GCAG-TACC-AGCAAAC  1056
      |||| |||| |||||||
seq2  GCAGTTACCTAGCAAAC  1066