BAC Information

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BAC

Clone NameB6Ng01-207N23
Chromosome18 (Build37)
Map Location 34,358,230 - 34,359,343
singlet/doubletsinglet
Overlap genenone
Upstream geneStard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258, Epb4.1l4a, EG666296, Ppia-ps18_318.1, Ppia-ps18_319.1
Downstream geneLOC666313, Apc, Srp19, Reep5, Pkd2l2, 2610024E20Rik, Wnt8a, Nme5, 4933408B17Rik, Brd8, Kif20a, Cdc23, Gfra3, Cdc25c, LOC100041859, 2810012G03Rik, LOC100041879, LOC100041887, Jmjd1b, Reep2, Egr1, Etf1, Hspa9, LOC100041377, EG626954, LOC100041951, Ctnna1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N23.bB6Ng01-207N23.g
ACCGA026906GA026907
length1,104475
definitionB6Ng01-207N23.b B6Ng01-207N23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagcacagacagggctacatagagaaaccgcttcaaaacacaaa
aaacaacaaaagtaccaaacaacaacccgatgacaaccacaaaaacattg
ttacttagaaatggtcaactcctctaacatacaaagcagaatgtcacatt
caaaatacactgtagggccaatgagaaggcttatttgataaagtgcttgc
ccacacaaacaggaggacctaagtcaaatcccatgttatacaacaagcaa
aacaggcatggtagtatgtgcttgtactcccagtactggggaggtagaga
caaggagattcctggggctccctggttgactagccataaacaaatccatg
agtgccaggccaacgagagaccttgtcataaaaaccaagatggaatcctg
gagagatggctccatgattagatagcttgctactgtcccagaggagctgt
gtcaggcagtgacaatcacttgcaactccagtttcagggatctgacaccc
tctttttggcttcttgcacacacatgcacacacatgacgtatatctactc
agagatgcagatacatgcataaaaaaagctcaacataggcagctcctgga
gaatggcatgtaaaaatgtccacacacacacacacacacacacacacaca
cacacacacacacacacacagataaaagacactatggcttagattcgggt
cctgactctcagaaagatacacttgtaccaagtatggtgcatttgtatgt
atatcagacatacagacatgcatctaggtgtagatgtatatctttgctgg
gtccatgactgtctgtacataaaatccttcagtttaatcctaaatgtaag
cgctgctaaatgacgtgtagcctttcacacctttagtgtgttgaaggctg
aaggaggaaagttgctgtgggcatttgtcactgcagggtcgcagagaaag
acagctgttccctagctgctgctcaacgatctgcagtgaaagagaaaaaa
gagacgtttcagtagttttgatagttctgcttatattttgaaagcatatg
tggcttctttgatgctcactgagcgttttttgggggcacttattggtaca
ttta
atcccatatatagtcaccaaacccgaaccctatagtggacgccaggaagt
gcttgctgacaggcacctggtatggctgtctctagagaggctctgccaga
gcctgacaaatacagaggcggccagatggaggagctggagaagggactga
aggagctgaggtgggctgcagccccatagagggcgcaacagtgtcaacag
gccagatcccctggagttcccggggactagatcaccagccaaagaataca
catggagggagggacccatggctctggctgcatatgcggcagaggatggc
cttgttggacatcagtgggaggagctgcccttgggcctgagggtatttga
tgcctcagtgtagggaatgccagggtgagaagacaggagtggtaagtggg
tgggggagcacccacaaagaggcagggggagaggggatggcgtaatgttt
ttttttttttaatttaaataaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_34358230_34359343
seq2: B6Ng01-207N23.b_45_1148 (reverse)

seq1  TAAATGTACCCAAATTAGTTGCCCCCCCAAAAAACGCTCAGTGAGCATCA  50
      ||||||||||  ||| |||    |||||||||||||||||||||||||||
seq2  TAAATGTACC--AATAAGT---GCCCCCAAAAAACGCTCAGTGAGCATCA  45

seq1  AAG-AGCCACATTATGCTTTCAAAATTATTAAGCAG-ACTATTCAAAACT  98
      ||| ||||||| ||||||||||||||   ||||||| |||| ||||||||
seq2  AAGAAGCCACA-TATGCTTTCAAAAT--ATAAGCAGAACTA-TCAAAACT  91

seq1  ACTGAAACGTTCTCTTTTTTTCTCTTTTCCACTGCAGATCGTTGAGCAGC  148
      ||||||||| |||| ||||||||||||  |||||||||||||||||||||
seq2  ACTGAAACG-TCTC-TTTTTTCTCTTT--CACTGCAGATCGTTGAGCAGC  137

seq1  AGCTA-GGAACAGCTGTCTTTCTCTGCGACCCTGCAGTGACAAATGCCCA  197
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGGAACAGCTGTCTTTCTCTGCGACCCTGCAGTGACAAATGCCCA  187

seq1  CAGCAACTTTCCTCCTTCAGCCTTCAACACACTAAAGGTGTGAAAGGCTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTTTCCTCCTTCAGCCTTCAACACACTAAAGGTGTGAAAGGCTA  237

seq1  CACGTCATTTAGCAGCGCTTACATTTAGGATTTAACTGAAGGATTTTATG  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACGTCATTTAGCAGCGCTTACATTTAGGATTAAACTGAAGGATTTTATG  287

seq1  TACAGACAGTCATGGACCCAGCAAAGATATACATCTACACCTAGATGCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACAGTCATGGACCCAGCAAAGATATACATCTACACCTAGATGCAT  337

seq1  GTCTGTATGTCTGATATACATACAAATGCACCATACTTGGTACAAGTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATGTCTGATATACATACAAATGCACCATACTTGGTACAAGTGTA  387

seq1  TCTTTCTGAGAGTCAGGACCCGAATCTAAGCCATAGTGTCTTTTATCTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAGAGTCAGGACCCGAATCTAAGCCATAGTGTCTTTTATCTGT  437

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAC  487

seq1  ATTTTTACATGCCATTCTCCAGGAGCTGCCTATGTTGAGCTTTTTTTATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACATGCCATTCTCCAGGAGCTGCCTATGTTGAGCTTTTTTTATG  537

seq1  CATGTATCTGCATCTCTGAGTAGATATACGTCATGTGTGTGCATGTGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCTGCATCTCTGAGTAGATATACGTCATGTGTGTGCATGTGTGT  587

seq1  GCAAGAAGCCAAAAAGAGGGTGTCAGATCCCTGAAACTGGAGTTGCAAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGCCAAAAAGAGGGTGTCAGATCCCTGAAACTGGAGTTGCAAGT  637

seq1  GATTGTCACTGCCTGACACAGCTCCTCTGGGACAGTAGCAAGCTATCTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCACTGCCTGACACAGCTCCTCTGGGACAGTAGCAAGCTATCTAA  687

seq1  TCATGGAGCCATCTCTCCAGGATTCCATCTTGGTTTTTATGACAAGGTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAGCCATCTCTCCAGGATTCCATCTTGGTTTTTATGACAAGGTCT  737

seq1  CTCGTTGGCCTGGCACTCATGGATTTGTTTATGGCTAGTCAACCAGGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTGGCCTGGCACTCATGGATTTGTTTATGGCTAGTCAACCAGGGAG  787

seq1  CCCCAGGAATCTCCTTGTCTCTACCTCCCCAGTACTGGGAGTACAAGCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGAATCTCCTTGTCTCTACCTCCCCAGTACTGGGAGTACAAGCAC  837

seq1  ATACTACCATGCCTGTTTTGCTTGTTGTATAACATGGGATTTGACTTAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACCATGCCTGTTTTGCTTGTTGTATAACATGGGATTTGACTTAGG  887

seq1  TCCTCCTGTTTGTGTGGGCAAGCACTTTATCAAATAAGCCTTCTCATTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGTTTGTGTGGGCAAGCACTTTATCAAATAAGCCTTCTCATTGG  937

seq1  CCCTACAGTGTATTTTGAATGTGACATTCTGCTTTGTATGTTAGAGGAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAGTGTATTTTGAATGTGACATTCTGCTTTGTATGTTAGAGGAGT  987

seq1  TGACCATTTCTAAGTAACAATGTTTTTGTGGTTGTCATCGGGTTGTTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTTCTAAGTAACAATGTTTTTGTGGTTGTCATCGGGTTGTTGTT  1037

seq1  TGGTACTTTTGTTGTTTTTTGTGTTTTGAAGCGGTTTCTCTATGTAGCCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTTTTGTTGTTTTTTGTGTTTTGAAGCGGTTTCTCTATGTAGCCC  1087

seq1  TGTCTGTGCTGGAATTC  1114
      |||||||||||||||||
seq2  TGTCTGTGCTGGAATTC  1104