BAC Information

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BAC

Clone NameB6Ng01-210E07
Chromosome18 (Build37)
Map Location 82,390,384 - 82,464,195
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039458, LOC100040871
Downstream geneB020010K11Rik, Galr1, Mbp, EG637748, Zfp236, LOC100039563, Zfp516, LOC100041001, 4921531P14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210E07.bB6Ng01-210E07.g
ACCGA028651GA028652
length9991,039
definitionB6Ng01-210E07.b B6Ng01-210E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,390,384 - 82,390,691)(82,463,155 - 82,464,195)
sequence
gaattctcttgtttataagaagggtggatggattgtacaggaaaaattat
atcttgaaaagagtaaaatggatcacatgataaaggagcttgtagccaag
cctggcgacccatattcgatccctagaaccccatctccagctctcgaacc
ctcaccaaccccactatctcctcatcaccttctcacagaagcatggtaac
cccgatatctcctcatcaccaggtgagagaaccttggcgacccctctatc
tcatcaccatgtcacagtgccatggcaaccccactatctcctcatcagca
gctcagtttgccttgggaaccacactatctcctcatcaccagttcacagt
gccgtggcaacccctctgtctcttcttcgtggaatattttgagcacaatt
gggattaggttcatcttcaacgcatgatgacacagtgacctttctgtctc
ctcatcaccagctcacagctccagagtaacccctctgtctcctcatcacc
agctcacattgccaaagccacccctctgtccctctcatcacgtctttgat
ttgtctaggccactcctccgtctcctcattatcattgagtagagtgttgc
aacccttctgtgtcctcatgggctttttatcattttttaaagaaccggaa
tataatccctagtccatggagatggtgagatgtaattttacaggagtatc
tatatcttggaaagagtaaaatggttcactgggacacggatatgtgttca
caatctagagaaacgcaacttgaagctctgaaaaacatctacagctcagt
gcaccagagaaatgctctatctacttatctccagctcatagaaccagtgc
actctcactatctcctcatcaccaggtcaaagtaccggtacaaccatact
gatctcattaccagctcagagtgagaaaggcaacccctctgtctctcatc
gcagctcgaagccgccagtgtcaaccccactattctctcatcaccagct
gaattctctgggaagtcgtataaagcgagcagtgtagtatgcggatccta
gaaccaagagcttcttctctgaagcaacatctgtaagaaggatgcacact
tggtgagcactcatggcttcgtgagtcggtgattgaggttcaactgattc
tgtactaacttattgctccattcaatggtgcagctctttctaaattctaa
gaactggggagctttacagccacataaataatcactgtgtgtgttcatga
gtccacatatgtacagagattatcatttattagggggtaggtagtatcta
ataataacttatgaaaaaatatgtattaaattacaaaataaaacactaat
gagttactgtctggagtggtggttcattttgccctccctaccaccattgt
atgatgcgtctagctgtgtatctttggtattatttgaggtaagaattttg
ttttgttttagcctggtcaatgggaacaaagttttacgttatggctttcc
tctgcattttcctggggacaaatggtcttgatgtttgctgtcatcagtaa
cacttggtggattctacaactctgcaatattcagttattttgtaataggc
cccagacctctgccctactaacgctatgttggaagtgccgttctgacctt
atagcctagcatacaggccacgacattagaacaagacctaatttctcaaa
gacataatccatagttccaggatcttggctagttcctaaacatattgatt
tggctctttggcttctatagctttgcttcttgctaacttctttctaagca
aagtgtgttgaccaggatgttggcacaaaagcccaaaacagtgaagctta
aggctgcatgatttgggaaagtttcctgtgcagctgctggccagcaatac
agattttctatttggctttaagaaagtctgtctgtgttctctgcagctat
ctcgaaacagttattattctttcaaaacagtttccatcagactatgcatg
tagaacgatcatgcaagatgtagcgtagacagttctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_82390384_82390691
seq2: B6Ng01-210E07.b_370_1041

seq1  --------------------------------------------------  0
                                                        
seq2  TCTCCTCATCACCAGTTCACAGTGCCGTGGCAACCCCTCTGTCTCTTCTT  50

seq1  --------------------------------------------------  0
                                                        
seq2  CGTGGAATATTTTGAGCACAATTGGGATTAGGTTCATCTTCAACGCATGA  100

seq1  -------------------TCTCCTCATCACCAGCTCACAGTGCCAGAGT  31
                         ||||||||||||||||||||||  |||||||
seq2  TGACACAGTGACCTTTCTGTCTCCTCATCACCAGCTCACAGCTCCAGAGT  150

seq1  AACCCCTCTGTCTCCTCATCACCAGCTCACAGTGCCAGCGTAACCCCTCT  81
      ||||||||||||||||||||||||||||||| |||||  |  ||||||||
seq2  AACCCCTCTGTCTCCTCATCACCAGCTCACATTGCCAAAGCCACCCCTCT  200

seq1  GTC-----------------------------------------------  84
      |||                                               
seq2  GTCCCTCTCATCACGTCTTTGATTTGTCTAGGCCACTCCTCCGTCTCCTC  250

seq1  -----------------------------------TCCTCAAGGTAATTT  99
                                         |||||| ||   |||
seq2  ATTATCATTGAGTAGAGTGTTGCAACCCTTCTGTGTCCTCATGGGCTTTT  300

seq1  TATCATTTCTTCAAAAAACTGTAGTGAATTCTCGTGTTAAT-AAGAAGGG  148
      |||||||| || ||| ||| | | |  | || |  ||  ||  ||| || 
seq2  TATCATTT-TTTAAAGAACCGGAATATAATCCCTAGTCCATGGAGATGGT  349

seq1  TGGATGTAATTTTACAGGAAGAATTAGATCTTGGAAAGAATAAAATGGTT  198
        |||||||||||||||||  |  || |||||||||||| ||||||||||
seq2  GAGATGTAATTTTACAGGAGTATCTATATCTTGGAAAGAGTAAAATGGTT  399

seq1  CACAGGGTAAAGGACCT-TGTAGCCAAGCCTG-GCGACCCAAGTTCGATC  246
      ||| |||  | |||  | |||   ||| |  | |  || ||| ||  | |
seq2  CACTGGGACACGGATATGTGTTCACAATCTAGAGAAACGCAACTTGAAGC  449

seq1  CCTAGAACCCCATCACCAGCTCACAGCACCAGGACAACCCCACTATCTCC  296
       || |||   ||||  |||||||  |||||| || ||   | |||||| |
seq2  TCT-GAAAAACATCTACAGCTCAGTGCACCA-GAGAAATGCTCTATCTAC  497

seq1  TCTTCACCAGCT--------------------------------------  308
      |  || ||||||                                      
seq2  TTATCTCCAGCTCATAGAACCAGTGCACTCTCACTATCTCCTCATCACCA  547

seq1  --------------------------------------------------  308
                                                        
seq2  GGTCAAAGTACCGGTACAACCATACTGATCTCATTACCAGCTCAGAGTGA  597

seq1  --------------------------------------------------  308
                                                        
seq2  GAAAGGCAACCCCTCTGTCTCTCATCGCAGCTCGAAGCCGCCAGTGTCAA  647

seq1  -------------------------  308
                               
seq2  CCCCACTATTCTCTCATCACCAGCT  672

seq1: chr18_82463155_82464195
seq2: B6Ng01-210E07.g_65_1103 (reverse)

seq1  AAAAGAAACTGTCTACGCTAACATGTGGCATGAT-GGTCTACATGCAAAG  49
      ||||| ||||||||||||| |||| | ||||||| | |||||||||| ||
seq2  AAAAG-AACTGTCTACGCT-ACATCTTGCATGATCGTTCTACATGCATAG  48

seq1  TCTGATGGAAACTGTTTTTGAAAAGAAAAAAAATGTTTCAAGATAACTCC  99
      |||||||||||||| ||||||||  | || || |||||| ||||| || |
seq2  TCTGATGGAAACTG-TTTTGAAAGAATAATAACTGTTTCGAGATAGCTGC  97

seq1  AGAGAACACAGACAGACCTTCTTAAAGCCAAATAGAAAATCTGTATTGCT  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGAGAACACAGACAGACTTTCTTAAAGCCAAATAGAAAATCTGTATTGCT  147

seq1  GGCCAGCAGCTGCACAGGAAACTTTCCCAAATCATGCAGCCTTAAGCCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGCCAGCAGCTGCACAGGAAACTTTCCCAAATCATGCAGCCTTAAGCTTC  197

seq1  ACTGTTTTGGGCTTTTGTGCCAACATCCTGGTCAACACACTTTGCTTAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGGGCTTTTGTGCCAACATCCTGGTCAACACACTTTGCTTAGA  247

seq1  AAGAAGTTAGCAAGAAGCAAAGCTATAGAAGCCAAAGAGCCAAATCAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTAGCAAGAAGCAAAGCTATAGAAGCCAAAGAGCCAAATCAATA  297

seq1  TGTTTAGGAACTAGCCAAGATCCTGGAACTATGGATTATGTCTTTGAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGAACTAGCCAAGATCCTGGAACTATGGATTATGTCTTTGAGAA  347

seq1  ATTAGGTCTTGTTCTAATGTCGTGGCCTGTATGCTAGGCTCTAAGGTCAG  399
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTAGGTCTTGTTCTAATGTCGTGGCCTGTATGCTAGGCTATAAGGTCAG  397

seq1  AACGGCACCTCCAACATAGCGTTAGTAGGGCAGAGGTCTGGGGCCTATTA  449
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCACTTCCAACATAGCGTTAGTAGGGCAGAGGTCTGGGGCCTATTA  447

seq1  CAAAATAACTGAATATTGCAGAGTTGTAGAATCCACCAAGTGTTACTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACTGAATATTGCAGAGTTGTAGAATCCACCAAGTGTTACTGAT  497

seq1  GACAGCAAACATCAAGACCATTTGTCCCCAGGAAAATGCAGAGGAAAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAACATCAAGACCATTTGTCCCCAGGAAAATGCAGAGGAAAGCC  547

seq1  ATAACGTAAAACTTTGTTCCCATTGACCAGGCTAAAACAAAACAAAATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGTAAAACTTTGTTCCCATTGACCAGGCTAAAACAAAACAAAATTC  597

seq1  TTACCTCAAATAATACCAAAGATACACAGCTAGACGCATCATACAATGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCAAATAATACCAAAGATACACAGCTAGACGCATCATACAATGGT  647

seq1  GGTAGGGAGGGCAAAATGAACCACCACTCCAGACAGTAACTCATTAGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGAGGGCAAAATGAACCACCACTCCAGACAGTAACTCATTAGTGT  697

seq1  TTTATTTTGTAATTTAATACATATTTTTTCATAAGTTATTATTAGATACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGTAATTTAATACATATTTTTTCATAAGTTATTATTAGATACT  747

seq1  ACCTACCCCCTAATAAATGATAATCTCTGTACATATGTGGACTCATGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCCCCTAATAAATGATAATCTCTGTACATATGTGGACTCATGAAC  797

seq1  ACACACAGTGATTATTTATGTGGCTGTAAAGCTCCACAGTTCTTAGAATC  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  ACACACAGTGATTATTTATGTGGCTGTAAAGCTCCCCAGTTCTTAGAATT  847

seq1  TAGAAAGAGCTGCACCATTGAATGGAGCAATAAGCTAGTACAGAATCAGT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGAAAGAGCTGCACCATTGAATGGAGCAATAAGTTAGTACAGAATCAGT  897

seq1  TGAACCTCAATCACCGACTCACGAAGCCATGAGTGCTCACCAAGTGTGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCAATCACCGACTCACGAAGCCATGAGTGCTCACCAAGTGTGCA  947

seq1  TCCTTCTTACAGATGTTGCTTCAGAGAAGAAGCTCTTGGTTCTAGGATCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCTTCTTACAGATGTTGCTTCAGAGAAGAAGCTCTTGGTTCTAGGATCC  997

seq1  GCATACTACACTGCTCGCTTTATACGACTTCCCAGAGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTACACTGCTCGCTTTATACGACTTCCCAGAGAATTC  1039