BAC Information

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BAC

Clone NameB6Ng01-212H10
Chromosome18 (Build37)
Map Location 3,999,490 - 4,147,080
singlet/doubletdoublet
Overlap geneEG664867, LOC621666
Upstream geneLOC664794, Crem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549
Downstream geneLyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H10.bB6Ng01-212H10.g
ACCGA030250GA030251
length1,20498
definitionB6Ng01-212H10.b B6Ng01-212H10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,145,866 - 4,147,080)(3,999,490 - 3,999,587)
sequence
gaattccatcaagtgtgtttttatttcagcgtgtgctagctcttgtattt
gtgggggacaaagttccagtaactttcttttatgcctgccagagtatctt
aaagactacccgtctttaagagttagaagggctgggagcggagactttaa
ataccagctgggagcttcataggggccccactgcctcctttcactcataa
aacggctatctctgtcaatctgtgtttatttttctcctgcgttttaattt
gcttaatggactttggctgaagatttcccccaaggtctcaggaaagtcaa
gactagtaacccctaaggactgagctgtcacagcagagcactttgggcga
ttattttgtctgactttcatcatgtttgcttcagaaacaatggctgcaga
gtaggttggactgtgccctgccaattgggaacctgggaaagcagtagaca
gcattaggttgcttctcctccctgtactcttccctgtcttcccagctccc
acacccatgtcttcctctctcagtgtcctggtctttctcctttagtctcc
tcacactcagagatgtcaatctaagcaacattagaaaagagcttttgttg
ttgttacagaatttattcagaactaagtgatttgatgggactgagatctg
ggataaaaaattgatgaaggtttgttgttatgtttaaggaaacaaggtga
ctacagtgtgcagaagtaaactgaggaaggttgtataaattattttcaga
taatgctcctcaggcctgaggagtcatagcaaggttgaatggggaggctg
ataagcaggtgtgcaggtggagtcaagctcgtggaggggctgtgctcttt
tgtttgtgactctaggtttgccactctttcctaatagcttatgttttcag
gtaaaactcacccgaaaggtcgtccctctatgggcctcctggactctgtg
ttgccacatctgacacagctgttctattcttgccccagaactttcctttg
gcatcctgagtgctgtaagagtagcaggatgcagttgatttacaggcttg
gcctttcatctgtgttgactgtcacctcgatctgatgcaaacatgttctt
gaaccacaccatcctagtgcctacaggcttatcaagcatccattaccaca
tgaagaagtcatggattgccgtacactttctggcttgagaatcctggttc
attc
cttatgcttgttggaaaaaaatgttcacaaaattcaaaccaatggccatg
gtcatatgtgaggggagagaagagagagggagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4145866_4147080
seq2: B6Ng01-212H10.b_46_1249 (reverse)

seq1  GAATGAAACAGGATTCCCCAAGCCAGAAGTTGTCCCGGCTATCCATATGA  50
      ||||||| ||||||| | ||||||||||  |||  |||| ||||  ||||
seq2  GAATGAACCAGGATT-CTCAAGCCAGAAAGTGT-ACGGCAATCC--ATGA  46

seq1  CCTCTTCATGTGGGTATGGATGCTTTGGAGTGAAGCCCTGTA-GCACTGG  99
      | |||||||||||  ||||||||||    |  ||| |||||| ||||| |
seq2  CTTCTTCATGTGGTAATGGATGCTT----GATAAG-CCTGTAGGCACTAG  91

seq1  GGAATTTGTGTGTGTCA--GACATGGTTTGCATCAGATTCTGAGGTGACA  147
      |    | |||||  |||   |||| |||||||||||||   |||||||||
seq2  G---ATGGTGTGGTTCAAGAACAT-GTTTGCATCAGAT--CGAGGTGACA  135

seq1  GTCCACACAGATGAAGGGCCAAGCCTGTAAATCCAACTGCATCCTGCTAA  197
      ||| ||||||||||| |||||||||||||||| ||||||||||||||| |
seq2  GTCAACACAGATGAAAGGCCAAGCCTGTAAAT-CAACTGCATCCTGCT-A  183

seq1  CTCTTACAGCACTCAGGATGCCAAAGGAAAGTTCTGGGGCAAG-ATAGAA  246
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCTTACAGCACTCAGGATGCCAAAGGAAAGTTCTGGGGCAAGAATAGAA  233

seq1  CAGCTTGTGTCAGATGTGGCAACACAGAGTCCAGGAGG-CCATAGAGGGA  295
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGC-TGTGTCAGATGTGGCAACACAGAGTCCAGGAGGCCCATAGAGGGA  282

seq1  CGACC-TTCGGGTGAGTTTTACCTGAAAACATAAGCTATTAGGAAAGAGT  344
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCTTTCGGGTGAGTTTTACCTGAAAACATAAGCTATTAGGAAAGAGT  332

seq1  GGCAAACCTAGAGTCACAAACAAAAGAGCACAGCCCCTCCACGAGCTTGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACCTAGAGTCACAAACAAAAGAGCACAGCCCCTCCACGAGCTTGA  382

seq1  CTCCACCTGCACACCTGCTTATCAGCCT-CCCATTCAACCTTGCTATGAC  443
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCCACCTGCACACCTGCTTATCAGCCTCCCCATTCAACCTTGCTATGAC  432

seq1  TCCTCAGGCCTGAGGAGCATTATCTGAAAATAATTTATACAACCTTCCTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGGCCTGAGGAGCATTATCTGAAAATAATTTATACAACCTTCCTC  482

seq1  AGTTTACTTCTGCACACTGTAGTCACCTTGTTTCCTTAAACATAACAACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACTTCTGCACACTGTAGTCACCTTGTTTCCTTAAACATAACAACA  532

seq1  AACCTTCATCAATTTTTTATCCCAGATCTCAGTCCCATCAAATCACTTAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCATCAATTTTTTATCCCAGATCTCAGTCCCATCAAATCACTTAG  582

seq1  TTCTGAATAAATTCTGTAACAACAACAAAAGCTCTTTTCTAATGTTGCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATAAATTCTGTAACAACAACAAAAGCTCTTTTCTAATGTTGCTT  632

seq1  AGATTGACATCTCTGAGTGTGAGGAGACTAAAGGAGAAAGACCAGGACAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGACATCTCTGAGTGTGAGGAGACTAAAGGAGAAAGACCAGGACAC  682

seq1  TGAGAGAGGAAGACATGGGTGTGGGAGCTGGGAAGACAGGGAAGAGTACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGGAAGACATGGGTGTGGGAGCTGGGAAGACAGGGAAGAGTACA  732

seq1  GGGAGGAGAAGCAACCTAATGCTGTCTACTGCTTTCCCAGGTTCCCAATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGAAGCAACCTAATGCTGTCTACTGCTTTCCCAGGTTCCCAATT  782

seq1  GGCAGGGCACAGTCCAACCTACTCTGCAGCCATTGTTTCTGAAGCAAACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGCACAGTCCAACCTACTCTGCAGCCATTGTTTCTGAAGCAAACA  832

seq1  TGATGAAAGTCAGACAAAATAATCGCCCAAAGTGCTCTGCTGTGACAGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAAGTCAGACAAAATAATCGCCCAAAGTGCTCTGCTGTGACAGCT  882

seq1  CAGTCCTTAGGGGTTACTAGTCTTGACTTTCCTGAGACCTTGGGGGAAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTAGGGGTTACTAGTCTTGACTTTCCTGAGACCTTGGGGGAAAT  932

seq1  CTTCAGCCAAAGTCCATTAAGCAAATTAAAACGCAGGAGAAAAATAAACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCAAAGTCCATTAAGCAAATTAAAACGCAGGAGAAAAATAAACA  982

seq1  CAGATTGACAGAGATAGCCGTTTTATGAGTGAAAGGAGGCAGTGGGGCCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGACAGAGATAGCCGTTTTATGAGTGAAAGGAGGCAGTGGGGCCC  1032

seq1  CTATGAAGCTCCCAGCTGGTATTTAAAGTCTCCGCTCCCAGCCCTTCTAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGCTCCCAGCTGGTATTTAAAGTCTCCGCTCCCAGCCCTTCTAA  1082

seq1  CTCTTAAAGACGGGTAGTCTTTAAGATACTCTGGCAGGCATAAAAGAAAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAAGACGGGTAGTCTTTAAGATACTCTGGCAGGCATAAAAGAAAG  1132

seq1  TTACTGGAACTTTGTCCCCCACAAATACAAGAGCTAGCACACGCTGAAAT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAACTTTGTCCCCCACAAATACAAGAGCTAGCACACGCTGAAAT  1182

seq1  AAAAACACACTTGATGGAATTC  1215
      ||||||||||||||||||||||
seq2  AAAAACACACTTGATGGAATTC  1204

seq1: chr18_3999490_3999587
seq2: B6Ng01-212H10.g_71_168

seq1  CTTATGCTTGTTGGAAAAAAATGTTCACAAAATTCAAACCAATGGCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCTTGTTGGAAAAAAATGTTCACAAAATTCAAACCAATGGCCATG  50

seq1  GTCATATGTGAGGGGAGAGAAGAGAGAGGGAGAGAGAGAGAGAGAGAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGTGAGGGGAGAGAAGAGAGAGGGAGAGAGAGAGAGAGAGAG  98