BAC Information

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BAC

Clone NameB6Ng01-214B06
Chromosome18 (Build37)
Map Location 4,764,505 - 4,765,680
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988
Downstream geneSvil, Zfp438, LOC100039442, Zeb1, EG664925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214B06.bB6Ng01-214B06.g
ACCGA031426GA031427
length6841,168
definitionB6Ng01-214B06.b B6Ng01-214B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttagataaatggatggatctggaggatatcatcct
gagtgaggtgacccaatcacaaaagaacagacatgatatgcactcactga
taagtgaatattagcccagaagctgagaatccttctcagaacagggacca
aaatacccatggaaagagttacagagaaaatgttcagagcagggtctgaa
gaaacaaccatccagagactgccccacttggggatctatcccataaacaa
acacctaaccaagaccctatggcaggtgccaacaagagcttgctaacagg
agcctgatatagctgtctcctgagggcttatgccagtgcctggcaaatgc
agaagtggatgctcacagtcatccattggacagagcacaaggtcctcaat
gaaagaggtagagaaagtacccgaggagctgaaggggtctgaagctccat
aggaggaaaatcaatatgaactaaccagtaccccagtacagctccttgga
actaaatcaccaatcaaagaaaacacatggtgtgacttgtggctctagct
gtatatgtaacagaagatggcctagtcggtcatcaatgggagtagaggcc
cttggtcctgtgaaggttctatgccccagtataggggaatgccaagactg
ggaataggagtgggtggtttggagagtagtggga

gaattctcttaagagtagaaactgtgtccacttgtttagctgtgtgttcc
catgtctagcatttttcctggtgcttcatagaacattctccaaaattcat
ctattaaggacacatattgagtagagagagtttcttggtagccaactatg
gatacctgtcatttattctactgatcctttgttgctgggtttcagggacc
ctgttcaatgccatgaacagttaatttatccttttggaagcacacttgca
taaaaatctggttatggtaagttaaacacccatgtttcttctcttctgtt
ccagacatggatagttctatgacgtcattaaggacacaatgttctgtctt
tgcactgcatcctggacttatcctcaagagaatataatgggtgctagaat
tctaaccattactgctgaaattccatgcaggaaacagaaccaccaactga
tcttattcaaaaggttaaacaaagttgggtgtgatcaaacaatagtcaaa
tagtagctgagcaaaatttctcaaatcactcattacttctgtctttccta
taggttataaagagtctctcttttaatagaacaaatgttaccactctacc
agtaaactgtatctcagtgtaccaagacgaaagcttcctcattgatcagc
cagcctccaatgcaaatgactaggtatgcctttcccagagctcagtggca
acggagtggagaaactggacttggacactgttcattggatgagctgacat
gtttgtgtgctggaaggaacagacagacatgttttgtgtcagctctccag
gtgcctttgtgcctgatgcagcagggatgacagctgatagagccaacggc
agcctgagttcctgcccctcttagaggtctcctttcagattaagcagaac
ctctgactgtctcagcaaatgtcaggaagaatttactaaaagcaaagtta
gtgagtttaagtattcacacagagtcatccaggaaaataaaatccagagc
tagggcgtgggcttctcagagtctgcttgggtcgtttgcacgctatacac
gagatgctgtgtctctcagtatatgtctcaaaggacttgtgttagtcttc
ttctaggcttcagagcaacaagacttgtatctacatttaaagtcttggac
gaactcattctctcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4764505_4765680
seq2: B6Ng01-214B06.g_67_1234 (reverse)

seq1  CCAAGAGAG-ATGAGTCGGCTCAAAGACTTTTAATGTAGATACCAAGTCT  49
      ||||||||| ||||||  | || |||||||| |||||||||| |||||||
seq2  CCAAGAGAGAATGAGTTCG-TCCAAGACTTTAAATGTAGATA-CAAGTCT  48

seq1  TGTTTGCTCTTGAAGCCTTAGAAG-AGACTTACAC-AGT-CTTTGAGACA  96
      || |||||| ||||||| |||||| ||||| |||| ||| ||||||||||
seq2  TG-TTGCTC-TGAAGCC-TAGAAGAAGACTAACACAAGTCCTTTGAGACA  95

seq1  TATTACTGAGAGACACAGCATCTCGTGTATAGCCGTGCAAACGGACCCAA  146
      || ||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TA-TACTGAGAGACACAGCATCTCGTGTATAG-CGTGCAAAC-GACCCAA  142

seq1  GCAGGACTCTTGGAAGAAGCCCACGCCCTAGCTCTGGATTTTATTTTCCT  196
      ||| ||||||    ||||||||||||||||||||||||||||||||||||
seq2  GCA-GACTCT---GAGAAGCCCACGCCCTAGCTCTGGATTTTATTTTCCT  188

seq1  GGATGACTCTGTGTGAATACTTAAACTCACTAACTTTGCTTTTAGTAAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACTCTGTGTGAATACTTAAACTCACTAACTTTGCTTTTAGTAAAT  238

seq1  TCTTCCTGACATTTGCTGAGACAGTCAGAGGTTCTGCTTAATCTGAAAGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGACATTTGCTGAGACAGTCAGAGGTTCTGCTTAATCTGAAAGG  288

seq1  AGACCTCTAAGAGGGGCAGGAACTCAGGCTGCCGTTGGCTCTATCAGCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCTAAGAGGGGCAGGAACTCAGGCTGCCGTTGGCTCTATCAGCTG  338

seq1  TCATCCCTGCTGCATCAGGCACAAAGGCACCTGGAGAGCTGACACAAAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTGCTGCATCAGGCACAAAGGCACCTGGAGAGCTGACACAAAAC  388

seq1  ATGTCTGTCTGTTCCTTCCAGCACACAAACATGTCAGCTCATCCAATGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCTGTTCCTTCCAGCACACAAACATGTCAGCTCATCCAATGAA  438

seq1  CAGTGTCCAAGTCCAGTTTCTCCACTCCGTTGCCACTGAGCTCTGGGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCAAGTCCAGTTTCTCCACTCCGTTGCCACTGAGCTCTGGGAAA  488

seq1  GGCATACCTAGTCATTTGCATTGGAGGCTGGCTGATCAATGAGGAAGCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACCTAGTCATTTGCATTGGAGGCTGGCTGATCAATGAGGAAGCTT  538

seq1  TCGTCTTGGTACACTGAGATACAGTTTACTGGTAGAGTGGTAACATTTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTTGGTACACTGAGATACAGTTTACTGGTAGAGTGGTAACATTTGT  588

seq1  TCTATTAAAAGAGAGACTCTTTATAACCTATAGGAAAGACAGAAGTAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAAAAGAGAGACTCTTTATAACCTATAGGAAAGACAGAAGTAATG  638

seq1  AGTGATTTGAGAAATTTTGCTCAGCTACTATTTGACTATTGTTTGATCAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGAGAAATTTTGCTCAGCTACTATTTGACTATTGTTTGATCAC  688

seq1  ACCCAACTTTGTTTAACCTTTTGAATAAGATCAGTTGGTGGTTCTGTTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACTTTGTTTAACCTTTTGAATAAGATCAGTTGGTGGTTCTGTTTC  738

seq1  CTGCATGGAATTTCAGCAGTAATGGTTAGAATTCTAGCACCCATTATATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGGAATTTCAGCAGTAATGGTTAGAATTCTAGCACCCATTATATT  788

seq1  CTCTTGAGGATAAGTCCAGGATGCAGTGCAAAGACAGAACATTGTGTCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGGATAAGTCCAGGATGCAGTGCAAAGACAGAACATTGTGTCCT  838

seq1  TAATGACGTCATAGAACTATCCATGTCTGGAACAGAAGAGAAGAAACATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACGTCATAGAACTATCCATGTCTGGAACAGAAGAGAAGAAACATG  888

seq1  GGTGTTTAACTTACCATAACCAGATTTTTATGCAAGTGTGCTTCCAAAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTAACTTACCATAACCAGATTTTTATGCAAGTGTGCTTCCAAAAG  938

seq1  GATAAATTAACTGTTCATGGCATTGAACAGGGTCCCTGAAACCCAGCAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATTAACTGTTCATGGCATTGAACAGGGTCCCTGAAACCCAGCAAC  988

seq1  AAAGGATCAGTAGAATAAATGACAGGTATCCATAGTTGGCTACCAAGAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCAGTAGAATAAATGACAGGTATCCATAGTTGGCTACCAAGAAA  1038

seq1  CTCTCTCTACTCAATATGTGTCCTTAATAGATGAATTTTGGAGAATGTTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTACTCAATATGTGTCCTTAATAGATGAATTTTGGAGAATGTTC  1088

seq1  TATGAAGCACCAGGAAAAATGCTAGACATGGGAACACACAGCTAAACAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCACCAGGAAAAATGCTAGACATGGGAACACACAGCTAAACAAG  1138

seq1  TGGACACAGTTTCTACTCTTAAGAGAATTC  1176
      ||||||||||||||||||||||||||||||
seq2  TGGACACAGTTTCTACTCTTAAGAGAATTC  1168


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