BAC Information

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BAC

Clone NameB6Ng01-214P10
Chromosome18 (Build37)
Map Location 18,110,515 - 18,111,046
singlet/doubletsinglet
Overlap genenone
Upstream gene1700001G01Rik, 4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214P10.bB6Ng01-214P10.g
ACCGA032069GA032070
length1,0071,186
definitionB6Ng01-214P10.b B6Ng01-214P10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tttgtagtccaccttcttgagttctttatatatattggatggtagtcccc
tatctaattaaggtaggtaaagatcctttcccaatctgttggtggtcttt
ttgtcttattgatggtgtcttttgccttgcagaagctttgcaactttatg
gggtcccatttattgattttcgatattacagcacaagccattgatgttct
attcaggaattttccccttgtacccatatcttcgaggcatttccctactt
tctcctctataagtttcagtgtctctggttttacgtggagttccttaatc
cacttagatttgaccttagtgcaaggagataggaatggatcaattcgcat
tcatatacacaatagccaccagttgtgccagctccatttgttgaaaatgc
ggtcttttttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatctctgggtcttcaattctgttccattcgtc
tacttgtctgacactataccagtaccatgcagtttttatcacaattggtc
tgtagtacagctttaggtcaggcatggtgattccaccagagattctttta
tccttgagaagagtttttgctatcctaggttttttgttattccagatgga
tttgcaaattgacttttctagttccttgaagaattgagttggaattttga
tggggattgcatttgaatctgtagatttgcttttggcaagatagccattt
ttactatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttatttctttcttcagagacttaaagttcttatcatac
agatctttcactccttagttagagtcacgccaggtatttatattattgtg
actattgagaaggtgttgttcattaatttctttctcagcctgttatcctt
tgatgta

gaattctcatctgaggaataccgaatgattgagaagcacctaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagccagaatggctaagatcaaaaactcaggtgacagca
gatgctggtaaggatgtggagaaagaggaacactcctccattgctggtgg
gattgcaagcttgtacaactactctggaagtcagtctgaaggttcctcaa
aaaattggacattgtactaccagaagatccagcaataccattcctgggca
tatacccagaagatgctccaacttgtaataaggacacatgtgtcactatg
tttatagcaccctatataatagccagaagctgaaagaacccagatgtccc
tcaacagaggaatgagtaaaaaaagtatggtacctttacacaatggagta
atactaaggtattaaaaacaatgaatttatgaaattcacagacaaatgga
tggatctagagcatattatcctaagtgtggtaacccaatcacaaaagaac
acacatgatatgcactcactgatatgtggatagtagcccagaagctcaga
atacccaagatacaatttgcaaaacacatgaaactcaggaagaaggaaaa
ccaaaatatggatgctttgatccttcttagaagagggaacaaattatcca
tggaaggagtttcagagacaaagttcagagcagagactgaaaggatcgac
catccagagactgccctacctggggatccatcccataaacaaccaccaaa
cccagacactattgtgaatgccaacaagagcttcctgacaggagactaat
aatgctgtctcctgagaggctctgccagtgcatgacaaatacagaagtgg
atgctcacagctatatattggacgaggcacagagtccccagtgaaggaac
tagagaatgtacccaaggagctgtagtgtttgagccccatagaagaaata
caatatgactaccagttacccctgagctcctttgggaataacaccatcaa
agaaaacacatggtgggaactccttgctctactgccatatgtagccagaa
gaatgcctagtgctatccattcagtccatgtgcattgtgaagcctggtct
gtgagaatcctatgcccagatatatggggaatgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18110515_18111046
seq2: B6Ng01-214P10.b_526_1052 (reverse)

seq1  TACA-CAAAGGACAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCAT  49
      |||| |||||||  |||||||||||||||||||||  | ||||||||| |
seq2  TACATCAAAGGA-TAACAGGCTGAGAAAGAAATTAATG-AACAACACC-T  47

seq1  TCTCAATAGCCACAAATAATATAAAATACCTAAGCGTGACTCTAACTAAG  99
      ||||||||| ||| |||||||| ||||||||  |||||||||||||||| 
seq2  TCTCAATAGTCAC-AATAATAT-AAATACCT-GGCGTGACTCTAACTAA-  93

seq1  GGAGTGAAAGATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAAT  149
      |||||||||||||||||||| |||||||| ||||||||||||||||||| 
seq2  GGAGTGAAAGATCTGTATGATAAGAACTTTAAGTCTCTGAAGAAAGAAA-  142

seq1  TAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATCGGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCA  192

seq1  GGATTAATATCGTAAAAATGGCTATCTTGCCAAAAGC-AATCTACAGATT  248
      |||| ||||| |||||||||||||||||||||||||| ||||||||||||
seq2  GGATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAAATCTACAGATT  242

seq1  C-AATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAA  297
      | |||||||||||||||||||||||||||||||||||||| ||| |||||
seq2  CAAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAAGGAACTAGAA  292

seq1  AGGGCAATCGGCAGATTCATCTGGAATAACAAAAAACCTAGGATAGCAAA  347
      | | ||||  ||| || |||||||||||||||||||||||||||||||||
seq2  AAGTCAATTTGCAAATCCATCTGGAATAACAAAAAACCTAGGATAGCAAA  342

seq1  AACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCAGACC  397
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  AACTCTTCTCAAGGATAAAAGAATCTCTGGTGGAATCACCATGCCTGACC  392

seq1  TAAAGATGTACTACAGAGCAACTGTGATAAAAACTGCATGGTACTGGTAT  447
      ||||| ||||||||||| ||| ||||||||||||||||||||||||||||
seq2  TAAAGCTGTACTACAGACCAATTGTGATAAAAACTGCATGGTACTGGTAT  442

seq1  AGCGACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGAGATGAA  497
      || | ||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTGTCAGACAAGTAGACGAATGGAACAGAATTGAAGACCCAGAGATGAA  492

seq1  CGCACACACCTATGGTCACTTGAACTTTGACAAGG  532
      | ||||||||||||||||||||| |||||||||||
seq2  CCCACACACCTATGGTCACTTGATCTTTGACAAGG  527


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