MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-216K08
Chromosome	18 (Build37)
Map Location	13,875,224 - 14,002,822
singlet/doublet	doublet
Overlap gene	Zfp521
Upstream gene	2810439F02Rik, Cabyr, LOC665356, Osbpl1a, LOC435556, Impact, Hrh4, EG383354, LOC665379, LOC100040358
Downstream gene	LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b
Link	Open Mouse BAC browser

Click to get alignment info.

name	2810439F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72747 MGI:1919997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cabyr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	LOC665356 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Osbpl1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64291 MGI:1927551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 704 ESTs, 7 Proteins pseudo : _no_value

name	Impact (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16210 MGI:1098233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hrh4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225192 MGI:2429635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG383354 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383354 MGI:3645528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665379 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665379
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040358 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Zfp521 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225207 MGI:95459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100040103 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC382096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382096
definition	note : peptidylprolyl isomerase A pseudogene chr18_148.1 pseudo : _no_value

name	LOC100040129 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins

name	EG623867 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623867 MGI:3648519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 7 Proteins

name	Ss18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268996 MGI:107708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040446 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Psma8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73677 MGI:1920927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 24 ESTs, 13 Proteins

name	Taf4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72504 MGI:2152345
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 3 Proteins

name	2810439F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353858 GeneID:72747 MGI:1919997
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810439F02 gene transcript_id : NM_028341.2

name	Cabyr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560782 GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) transcript_id : NM_027687.2

name	Cabyr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255219 GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) transcript_id : NM_001042418.1

name	Cabyr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255223 GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) transcript_id : NM_001042420.1

name	Cabyr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255217 GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) transcript_id : NM_181731.3

name	Cabyr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255221 GeneID:71132 MGI:1918382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) transcript_id : NM_001042419.1

name	Osbpl1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52345395 GeneID:64291 MGI:1927551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 1A transcript_id : NM_207530.2

name	Impact (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130830 GeneID:16210 MGI:1098233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : imprinted and ancient transcript_id : NM_008378.2

name	Hrh4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346506 GeneID:225192 MGI:2429635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histamine H4 receptor transcript_id : NM_153087.1

name	LOC100040358 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269656 GeneID:100040358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040358 transcript_id : XM_001474731.1

name	Zfp521 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367862 GeneID:225207 MGI:95459
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 521 transcript_id : NM_145492.2

name	Zfp521 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369361 GeneID:225207 MGI:95459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 521 transcript_id : NM_181326.3

name	LOC100040094 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269640 GeneID:100040094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001474082.1

name	LOC100040391 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269658 GeneID:100040391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040391 transcript_id : XM_001474750.1

name	LOC100040129 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269642 GeneID:100040129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins product : similar to put. HMG-17 protein transcript_id : XM_001474128.1

name	EG623867 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269660 GeneID:623867 MGI:3648519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 7 Proteins product : predicted gene, EG623867 transcript_id : XM_888379.3

name	Ss18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678146 GeneID:268996 MGI:107708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synovial sarcoma translocation, Chromosome 18 transcript_id : NM_009280.1

name	LOC100040446 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269662 GeneID:100040446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040446 transcript_id : XM_001474830.1

name	Psma8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269664 GeneID:73677 MGI:1920927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 3 Proteins product : proteasome (prosome, macropain) subunit, alpha type, 8, transcript variant 1 transcript_id : XM_357002.5

name	Taf4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269666 GeneID:72504 MGI:2152345
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 3 Proteins product : TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : XM_128905.6

name	2810439F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312214 CCDS:CCDS29065.1 GeneID:72747 MGI:1919997
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72747 protein_id : NP_082617.1

name	Cabyr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255218 GeneID:71132 MGI:1918382
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 2; calcium-binding tyrosine-phosphorylation regulated protein, isoform 2 product : calcium-binding tyrosine-phosphorylation regulated protein isoform c protein_id : NP_859420.2

name	Cabyr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255222 GeneID:71132 MGI:1918382
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform e is encoded by transcript variant 4; calcium-binding tyrosine-phosphorylation regulated protein, isoform 2 product : calcium-binding tyrosine-phosphorylation regulated protein isoform e protein_id : NP_001035884.1

name	Cabyr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255220 GeneID:71132 MGI:1918382
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 3; calcium-binding tyrosine-phosphorylation regulated protein, isoform 2 product : calcium-binding tyrosine-phosphorylation regulated protein isoform a protein_id : NP_001035883.1

name	Cabyr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255224 GeneID:71132 MGI:1918382
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 5; calcium-binding tyrosine-phosphorylation regulated protein, isoform 2 product : calcium-binding tyrosine-phosphorylation regulated protein isoform a protein_id : NP_001035885.1

name	Cabyr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312836 GeneID:71132 MGI:1918382
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS]; GO:0008603 - cAMP-dependent protein kinase regulator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; calcium-binding tyrosine-phosphorylation regulated protein, isoform 2 product : calcium-binding tyrosine-phosphorylation regulated protein isoform a protein_id : NP_081963.1

name	Osbpl1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52345396 CCDS:CCDS29067.1 GeneID:64291 MGI:1927551
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : oxysterol binding protein-like 1 protein_id : NP_997413.2

name	Impact (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680447 CCDS:CCDS29068.1 GeneID:16210 MGI:1098233
definition	GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001933 - negative regulation of protein amino acid phosphorylation [Evidence IDA]; GO:0006446 - regulation of translational initiation [Evidence IDA] codon_start : 1 product : imprinted and ancient protein_id : NP_032404.1

name	Hrh4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346507 CCDS:CCDS29069.1 GeneID:225192 MGI:2429635
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004969 - histamine receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : histamine H4 receptor protein_id : NP_694727.1

name	LOC100040358 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269657 GeneID:100040358
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474781.1

name	Zfp521 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703968 GeneID:225207 MGI:95459
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ecotropic viral integration site 3 product : zinc finger protein 521 isoform 1 protein_id : NP_663467.1

name	Zfp521 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044471 GeneID:225207 MGI:95459
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ecotropic viral integration site 3 product : zinc finger protein 521 isoform 2 protein_id : NP_851843.1

name	LOC100040094 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269641 GeneID:100040094
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474132.1

name	LOC100040391 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269659 GeneID:100040391
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474800.1

name	LOC100040129 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269643 GeneID:100040129
definition	codon_start : 1 product : similar to put. HMG-17 protein protein_id : XP_001474178.1

name	EG623867 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269661 GeneID:623867 MGI:3648519
definition	codon_start : 1 product : similar to BC003885 protein protein_id : XP_893472.2

name	Ss18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678147 CCDS:CCDS29070.1 GeneID:268996 MGI:107708
definition	GO_function : GO:0045735 - nutrient reservoir activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : synovial sarcoma, translocated to X chromosome; synovial sarcoma associated SS18-beta; synovial sarcoma associated SS18-delta; synovial sarcoma associated SS18-gamma product : synovial sarcoma translocation, Chromosome 18 protein_id : NP_033306.1

name	LOC100040446 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269663 GeneID:100040446
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474880.1

name	Psma8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269665 GeneID:73677 MGI:1920927
definition	codon_start : 1 product : proteasome (prosome, macropain) subunit, alpha type, 8 isoform 1 protein_id : XP_357002.2

name	Taf4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269667 GeneID:72504 MGI:2152345
definition	codon_start : 1 product : TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : XP_128905.4

name	EG383354 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383354
definition	number : 1 pseudo : _no_value

name	LOC665379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665379
definition	number : 1 pseudo : _no_value

name	LOC100040103 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040103
definition	number : 1 pseudo : _no_value

name	LOC100040103 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040103
definition	number : 2 pseudo : _no_value

name	LOC100040103 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040103
definition	number : 3 pseudo : _no_value

name	LOC665356 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269654 GeneID:665356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to CDK105 pseudo : _no_value transcript_id : XR_031786.1

name	LOC435556 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269655 GeneID:435556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 704 ESTs, 7 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_031851.1

clone name	MSMg01-214A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-216K08.b	B6Ng01-216K08.g
ACC	GA033284	GA033285
length	1,116	1,110
definition	B6Ng01-216K08.b	B6Ng01-216K08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(13,875,224 - 13,876,327)	(14,001,705 - 14,002,822)
sequence	gaattcagtgaaggtaactaattaatctgcagacagagaaatttcctttg aggtcaagatatctacacattccttctttccattgatgtgcttggccacc atgtgccagacacaggtgagatgatcactgaggatcataagtagccttga ccttagggtgacagcagaaaatgtgtgaacatatttcagtgctcatgggc tttgaggaataaattctaaagtgtatgtatgtctctatctctctctgtct ctctctttctctctgtgtgttaatgtttctgtgaatatgtgtgtgtgtgt gtgcacactcatgtgtgtggttaaccctgacaactgtaccactgtaacat ctgatacaaattttctaggatcatatatttctatcaacttttaaaatcca atctcacaaaaaataaacatctctaatctgtatactatttcaaagaagta ttttatttacacacacacacacacacacacacctttataaagaagttata aaattatccaggttgaggtcacatatgtgggggcactgggaccacatatt ttaattgaatatcgagtgactcaaaagcagccagactttggtaacctttt aacatccagaggaagaggagtgaacccaaagtggatgtcgttttccgagt gggaaagtgtaaacttgggcaagaactcgaaatgccattcgttcatcctg acagttaaccttcccgcccgggctcagtctctaaagcagactgcaatcaa taatgctaatcagcagaaatcaaacatcttcccccaaattgaacagcagt cgttgctgtaaaaggccaagcagtgggaagtacgcttggaggaaggacac agtggggtcagcgcacacacaggctgagattttgctttaagaagttcctt acctgtgaaacagacggggcacttgaaaggtaccacccatcccttcgaag cttgtgctcttatcaggtgacactgaatttggcggggggagttcaaaggt ctggctgcagagtttgccacctcatggtttcagcccttcatctgttgaag gaaagcacatttgacagaagaagtcaaaatctaacgttctttgtgataga gcccagatacctctca	gaattccctgactgggtttcgttgtgtggtgtgtatgcagactgtgacct ccaccttggaactcaaaatccacgggaccttccacatgcagaagacgggg aatgggtcctccgtgcagaccaccgggcgtggccagcacgttcagaaact gtataagtgcgcatcttgcctcaaagagttccgttccaagcaagatctgg tgaaactcgacatcaacggcctgccatatggtctgtgtgccggctgtgtg aatctcagtaagagcagtagcccgggcctcagtctccctcctggtgccag caggccaggcttgggccagaatgagagtctgagcgccatggaaggaaaag gcaaggcggggggactgaagacgcgctgttcaagctgcaatgtcaagttt gagtctgaaagcgaactgcagaaccacatccagacggtgcaccgggagct tgtgccagacgccaacagcacacagttgaaaacgccccaagtgtcaccca tgcccagaatcagtccctcccagtccgatgaggtaactcgccttttctca agcttgctatttcccccctttaaacacgacccccactttatagtcaagct tgccacggccttatctacttttgtcacatgcgccaagagatgcgtagttt gaaatgcaatgtttttctccctatagccattaactagcaattacttggtt cctgataagtagcattttggcttgaatggtgcaaaataggactaattcca gtctccctaggacactgtcttctctatgactgaagagactggctctcacg cttagcctactgagatctggaacctcactgtagtttcacacgcattgaaa tccccagctatgacttgtgcgtatggcaaagagataatgacacatgagta cagtagtgtgagccaacgtgttggcttggactctctctctctctctctct ctctctctctctctccctccgtcttctttcttgtatatatatatgcccac ccacatatctataggatgattatatatattagaggatgagtaacaatagt agtgtctttaatccatgtgacaacactcactgctttctttgtcttcggaa gtgaggaaaa
quality values	Open. Hide. 58 36 18 39 58 32 20 42 47 62 47 47 62 47 20 62 62 62 62 62 62 62 47 62 62 47 62 49 44 62 59 62 59 51 43 34 33 28 29 46 44 44 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 59 62 62 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 54 62 62 59 43 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 59 62 62 62 59 62 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 59 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 56 43 56 46 56 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 47 54 62 62 52 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 42 41 58 58 58 54 58 54 58 58 58 49 54 58 54 58 58 58 54 58 58 58 44 52 48 58 58 58 54 47 58 54 52 54 58 58 58 54 47 42 58 58 54 49 58 54 54 58 54 42 54 52 52 54 48 58 58 58 58 47 50 58 54 50 58 58 58 46 50 58 41 54 58 58 41 49 27 58 54 32 53 54 49 47 50 51 51 48 48 48 50 41 58 54 42 33 36 33 53 52 49 58 58 50 46 38 25 54 39 46 58 58 43 49 58 54 52 52 52 37 50 50 49 42 50 47 52 58 49 28 22 58 32 58 32 29 46 40 32 47 58 53 40 50 44 40 32 51 49 47 26 53 54 41 35 38 37 50 40 50 51 39 40 33 18 30 18 15 19 49 50 41 21 58 50 40 36 58 46 13 58 50 21 38 31 38 26 40 39 37 49 41 25 54 37 39 39 42 21 35 19 33 49 23 41 28 40 35 12 27 44 32 21 39 54 40 38 18 24 27 32 37 35 28 30 13 11 19 30 38 30 35 51 32 32 23 31 42 28 17 29 54 54 54 41 40 54 33 19 39 33 26 52 31 32 30 35 52 22 40 39 26 23 53 31 28 32 37 31 52 53 53 32 22 35 13 27 17 33 31 31 32 29 31 44 52 33 23 44 31 31 27 33 28 37 32 20 20 21 38 22 29 23 27 16 31 31 23 18 25 28 30 21 39 51 51 46 32 43 34 31 31 30 35 31 31 30 33 9 30 30 19 18 26 31 26 42 9 27 28 46 51 8 16 24 21 31 24 13 32 16 38 33 15 27 33 22 27 27 38 31 31 28 31 37 17 17 35 46 32 23 24 14 38 18 15 46 46 42 30 18 27 31 36 30 17 46 17 8 31 17 15 21 31 11 24 41 35 15 30 25 30 12 9 11 28 9 30 33 16 21 17 8 13 10 17 29 24 19 13 8 12 30 20 32 38 31 12 11 11 5 7 6 11 32 32 10 5 16 24 13 25 11 26 36 43 22 44 11 31 11 11 8 7 17 44 21 14 31 16 22 19 23 34 21 15 14 31 14 11 14 7 23 34 37 13 6 8 13 18 11 16 12 6 10 24 29 11 36 20 17 18 8 11 16 13 13 8 10 8 10 24 27 12 5 13 10 8 5 12 6 15 25 24 10 6 12 9 18 6 39 15 7 7 9 21 10 33 12 6 8 10 10 4 11 18 28 18 9 6 13 15 13 9 20 6 14 13 8 17 34 16 7 18 18 18 13 9 5 7 5 14 29 7 6 10 3 5 11 18 9 26 20 27 20 7	Open. Hide. 62 47 51 47 62 62 62 62 62 62 44 39 38 32 32 21 32 45 59 44 29 33 46 62 59 62 62 62 59 59 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 54 59 56 33 43 54 59 62 59 59 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 59 54 62 62 62 62 62 62 62 62 42 62 62 59 59 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 50 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 47 43 62 62 62 62 62 62 52 62 62 54 54 62 58 58 58 44 52 54 58 58 54 58 42 41 52 54 58 58 58 58 58 58 52 54 54 54 58 52 58 40 52 58 42 58 42 52 58 52 58 58 54 58 58 58 58 58 58 54 52 51 32 58 54 58 58 49 58 58 54 52 54 58 49 58 58 58 58 58 58 58 58 54 49 49 52 54 52 58 54 54 37 58 58 58 44 40 58 51 58 41 49 53 41 50 51 53 42 58 52 53 58 51 51 47 50 40 51 54 58 48 58 51 51 53 53 50 41 46 40 58 58 58 52 52 46 41 32 50 40 58 58 58 52 58 51 39 51 46 58 34 36 29 41 37 37 39 52 37 50 58 51 37 29 58 50 51 50 27 31 51 50 58 20 38 58 58 51 50 41 41 58 58 50 50 52 32 42 52 52 32 58 51 40 41 43 41 29 29 39 32 33 36 31 42 50 32 51 51 50 33 35 39 53 42 53 41 29 32 51 26 42 39 25 40 52 53 54 54 28 49 42 40 39 36 30 23 51 35 49 46 29 50 33 40 54 54 50 40 49 34 53 32 18 31 53 53 40 40 31 36 28 40 32 47 37 39 54 36 35 34 14 41 34 24 32 37 38 51 25 45 22 28 37 32 36 30 33 40 33 34 31 29 31 34 45 24 41 22 26 22 29 41 51 35 41 43 40 33 31 33 31 31 26 45 36 22 26 24 31 35 31 31 38 37 22 28 31 29 30 31 30 51 31 17 36 23 28 25 30 30 32 28 34 19 32 48 33 34 23 31 31 28 26 31 32 33 31 27 28 47 27 23 25 48 46 33 31 29 29 30 20 31 28 30 31 25 30 38 30 38 32 28 31 32 22 12 39 26 38 46 39 17 42 22 37 31 24 38 27 43 32 27 21 31 19 33 33 33 13 29 31 34 21 32 29 32 16 15 35 19 31 31 20 25 26 16 30 32 27 15 26 15 15 22 27 18 13 25 18 24 5 5 29 19 31 7 13 8 29 22 31 19 33 32 18 13 15 13 25 24 32 27 29 19 28 14 16 10 31 21 32 17 16 5 11 8 31 8 15 11 9 5 25 6 15 4 9 32 14 6 6 5 3 14 6 13 5 14 15 6 3 4 6 19 14 20 18 12 6 6 3 3 3 4 10 8 29 11 17 7 6 9 6 4 5 10 6 3 3 5 7 8 10 20 7 6 9 25 8 9 19 5 6 8 8 7 15 9 17 7 27 10 15 15 6 7 3 9 3 9 4 5 5 2 2 1 2 6 28 13 17 11 8 5 4 6 5 17 24 12 8 5 16 21 13 8 12 18 8 6 10 5 3 3 9 25 14 14 7 25 19 12 6 14 16 6 3 5 2 2 3 7 7 8 12 8 4 3 9 14 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_13875224_13876327
seq2: B6Ng01-216K08.b_44_1159

seq1  GAATTCAGTGAAGGTAACTAATTAATCTGCAGACAGAGAAATTTCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAGGTAACTAATTAATCTGCAGACAGAGAAATTTCCTTTG  50

seq1  AGGTCAAGATATCTACACATTCCTTCTTTCCATTGATGTGCTTGGCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGATATCTACACATTCCTTCTTTCCATTGATGTGCTTGGCCACC  100

seq1  ATGTGCCAGACACAGGTGAGATGATCACTGAGGATCATAAGTAGCCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCAGACACAGGTGAGATGATCACTGAGGATCATAAGTAGCCTTGA  150

seq1  CCTTAGGGTGACAGCAGAAAATGTGTGAACATATTTCAGTGCTCATGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGGTGACAGCAGAAAATGTGTGAACATATTTCAGTGCTCATGGGC  200

seq1  TTTGAGGAATAAATTCTAAAGTGTATGTATGTCTCTATCTCTCTCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAATAAATTCTAAAGTGTATGTATGTCTCTATCTCTCTCTGTCT  250

seq1  CTCTCTTTCTCTCTGTGTGTTAATGTTTCTGTGAATATGTGTGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTCTCTGTGTGTTAATGTTTCTGTGAATATGTGTGTGTGTGT  300

seq1  GTGCACACTCATGTGTGTGGTTAACCCTGACAACTGTACCACTGTAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACTCATGTGTGTGGTTAACCCTGACAACTGTACCACTGTAACAT  350

seq1  CTGATACAAATTTTCTAGGATCATATATTTCTATCAACTTTTAAAATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACAAATTTTCTAGGATCATATATTTCTATCAACTTTTAAAATCCA  400

seq1  ATCTCACAAAAAATAAACATCTCTAATCTGTATACTATTTCAAAGAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAAAAATAAACATCTCTAATCTGTATACTATTTCAAAGAAGTA  450

seq1  TTTTATTTACACACACACACACACACACACACCTTTATAAAGAAGTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTACACACACACACACACACACACACCTTTATAAAGAAGTTATA  500

seq1  AAATTATCCAGGTTGAGGTCACATATGTGGGGGCACTGGGACCACATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCAGGTTGAGGTCACATATGTGGGGGCACTGGGACCACATATT  550

seq1  TTAATTGAATATCGAGTGACTCAAAAGCAGCCAGACTTTGGTAACCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAATATCGAGTGACTCAAAAGCAGCCAGACTTTGGTAACCTTTT  600

seq1  AACATCCAGAGGAAGAGGAGTGAACCCAAAGTGGATGTCGTTTTCCGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCAGAGGAAGAGGAGTGAACCCAAAGTGGATGTCGTTTTCCGAGT  650

seq1  GGGAAAGTGTAAACTTGGGCAAGAACTCGAAATGCCATTCGTTCATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTGTAAACTTGGGCAAGAACTCGAAATGCCATTCGTTCATCCTG  700

seq1  ACAGTTAACCTTCCCGCCC-GGCTCAGTCTCTAAAGCAGACTGCAATCAA  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACAGTTAACCTTCCCGCCCGGGCTCAGTCTCTAAAGCAGACTGCAATCAA  750

seq1  TAATGCTAATCAGCAGAAATCAAACATCTTCCCCCAAATTGAACAGCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTAATCAGCAGAAATCAAACATCTTCCCCCAAATTGAACAGCAGT  800

seq1  CGTTGCTGTAAAAGGCCAAGCAGTGGGAAGTACGCTTGGAGGAAGGACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCTGTAAAAGGCCAAGCAGTGGGAAGTACGCTTGGAGGAAGGACAC  850

seq1  AGTGGGGTCAGCGCACACACAGGCTGAGATTTTGCTTTAAGAAGTTCCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGTCAGCGCACACACAGGCTGAGATTTTGCTTTAAGAAGTTCCTT  900

seq1  ACCTGTGAAACAGACGGGGCACTTG-AAGGTACCACCCATCCCTTCGAAG  948
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCTGTGAAACAGACGGGGCACTTGAAAGGTACCACCCATCCCTTCGAAG  950

seq1  C-TGTGCTC-TATCAGGTGACACTGAAGTTTGGC-GGGGGAG-TCAAAGG  994
      | ||||||| ||||||||||||||||| |||||| ||||||| |||||||
seq2  CTTGTGCTCTTATCAGGTGACACTGAA-TTTGGCGGGGGGAGTTCAAAGG  999

seq1  TCTGGCTGCAGAGTTTGC--ACTCATGG-TTCAGCCCTTCATCTGTTG-A  1040
      ||||||||||||||||||   ||||||| ||||||||||||||||||| |
seq2  TCTGGCTGCAGAGTTTGCCACCTCATGGTTTCAGCCCTTCATCTGTTGAA  1049

seq1  GGAAAGCACA-TTGACAGAAGAGGTC-AAATCTACCG-TCTTTGTGATAG  1087
      |||||||||| ||||||||||| ||| ||||||| || ||||||||||||
seq2  GGAAAGCACATTTGACAGAAGAAGTCAAAATCTAACGTTCTTTGTGATAG  1099

seq1  AGCCAGGATACCTCTCA  1104
      ||||  |||||||||||
seq2  AGCCCAGATACCTCTCA  1116

seq1: chr18_14001705_14002822
seq2: B6Ng01-216K08.g_69_1178 (reverse)

seq1  TTTTCCTCACTACCCAGAAGACAAAGAAAAACAGTGAGTGTTGTCAACAT  50
      ||||||||||| ||  |||||||||| ||| |||||||||||||| ||||
seq2  TTTTCCTCACTTCC--GAAGACAAAG-AAAGCAGTGAGTGTTGTC-ACAT  46

seq1  GTATTAAAGACACCCTACCTAATTTGTTAC-CTCTCTCT-ATATATAT-A  97
      | ||||||||||  ||| |||  ||||||| |   |||| |||||||| |
seq2  GGATTAAAGACA--CTA-CTA--TTGTTACTCATCCTCTAATATATATAA  91

seq1  TCTATCTATAGATATGTGTGTGTGCATATATATATACAGAGAGAGAGAGA  147
      ||   ||||||||||||| ||| ||||||||||||||| ||| ||| |||
seq2  TCATCCTATAGATATGTGGGTGGGCATATATATATACA-AGAAAGA-AGA  139

seq1  GGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCCAAGCCA  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCCAAGCCA  189

seq1  ACACGTTGGCTCACACTACTGTACTCATGTGTCATTATCTCTTTGCCATA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTTGGCTCACACTACTGTACTCATGTGTCATTATCTCTTTGCCATA  239

seq1  CGCACAAGTCATAGCTGGGGATTTCAATGCGTGTGAAACTACAGTGAGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAAGTCATAGCTGGGGATTTCAATGCGTGTGAAACTACAGTGAGGT  289

seq1  TCCAGATCTCAGTAGGCTAAGCGTGAGAGCCAGTCTCTTCAGTCATAGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATCTCAGTAGGCTAAGCGTGAGAGCCAGTCTCTTCAGTCATAGAG  339

seq1  AAGACAGTGTCCTAGGGAGACTGGAATTAGTCCTATTTTGCACCATTCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTGTCCTAGGGAGACTGGAATTAGTCCTATTTTGCACCATTCAA  389

seq1  GCCAAAATGCTACTTATCAGGAACCAAGTAATTGCTAGTTAATGGCTATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATGCTACTTATCAGGAACCAAGTAATTGCTAGTTAATGGCTATA  439

seq1  GGGAGAAAAACATTGCATTTCAAACTACGCATCTCTTGGCGCATGTGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAAACATTGCATTTCAAACTACGCATCTCTTGGCGCATGTGACA  489

seq1  AAAGTAGATAAGGCCGTGGCAAGCTTGACTATAAAGTGGGGGTCGTGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGATAAGGCCGTGGCAAGCTTGACTATAAAGTGGGGGTCGTGTTT  539

seq1  AAAGGGGGGAAATAGCAAGCTTGAGAAAAGGCGAGTTACCTCATCGGACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGGAAATAGCAAGCTTGAGAAAAGGCGAGTTACCTCATCGGACT  589

seq1  GGGAGGGACTGATTCTGGGCATGGGTGACACTTGGGGCGTTTTCAACTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGACTGATTCTGGGCATGGGTGACACTTGGGGCGTTTTCAACTGT  639

seq1  GTGCTGTTGGCGTCTGGCACAAGCTCCCGGTGCACCGTCTGGATGTGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTGGCGTCTGGCACAAGCTCCCGGTGCACCGTCTGGATGTGGTT  689

seq1  CTGCAGTTCGCTTTCAGACTCAAACTTGACATTGCAGCTTGAACAGCGCG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTCGCTTTCAGACTCAAACTTGACATTGCAGCTTGAACAGCGCG  739

seq1  TCTTCAGTCCCCCCGCCTTGCCTTTTCCTTCCATGGCGCTCAGACTCTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTCCCCCCGCCTTGCCTTTTCCTTCCATGGCGCTCAGACTCTCA  789

seq1  TTCTGGCCCAAGCCTGGCCTGCTGGCACCAGGAGGGAGACTGAGGCCCGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCCCAAGCCTGGCCTGCTGGCACCAGGAGGGAGACTGAGGCCCGG  839

seq1  GCTACTGCTCTTACTGAGATTCACACAGCCGGCACACAGACCATATGGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGCTCTTACTGAGATTCACACAGCCGGCACACAGACCATATGGCA  889

seq1  GGCCGTTGATGTCGAGTTTCACCAGATCTTGCTTGGAACGGAACTCTTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTTGATGTCGAGTTTCACCAGATCTTGCTTGGAACGGAACTCTTTG  939

seq1  AGGCAAGATGCGCACTTATACAGTTTCTGAACGTGCTGGCCACGCCCGGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGATGCGCACTTATACAGTTTCTGAACGTGCTGGCCACGCCCGGT  989

seq1  GGTCTGCACGGAGGACCCATTCCCCGTCTTCTGCATGTGGAAGGTCCCGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCACGGAGGACCCATTCCCCGTCTTCTGCATGTGGAAGGTCCCGT  1039

seq1  GGATTTTGAGTTCCAAGGTGGAGGTCACAGTCTGCATACACACCACACAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGAGTTCCAAGGTGGAGGTCACAGTCTGCATACACACCACACAA  1089

seq1  CGAAACCCAGTCAGGGAATTC  1118
      |||||||||||||||||||||
seq2  CGAAACCCAGTCAGGGAATTC  1110

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information