BAC Information

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BAC

Clone NameB6Ng01-218C02
Chromosome18 (Build37)
Map Location 4,387,784 - 4,388,917
singlet/doubletsinglet
Overlap genePapd1
Upstream geneCul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8
Downstream geneEG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil, Zfp438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218C02.bB6Ng01-218C02.g
ACCGA034341GA034342
length1,1411,191
definitionB6Ng01-218C02.b B6Ng01-218C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaataaccccttgtggtatttttaaatgatttagaatgaag
acagcatactttgggggagggaggctatgagggagatgaacttcgagctt
tgtatttgctactcaagtgatggactactgagctagagtcccatctctca
acacacatatattagtttgtttataaaccatactcttgtattaaaattac
tggcagataccaggaagatgttgaagaactccaaggaagagaatgagacc
atcagatacctgcttatgaaaaacctccattagtactcaggagctgaagg
gcagggaagaaaactgtgggatgatgccaggggagtcctctatgctggga
gaagggggtcacagcaggccagaggaggcctgactcgggctgaggacttt
gagactgaaacagagtaatgatatactccatcattttggtgttgttattg
ttggttttccagtttccagatcccaagggctccatgacaagatgacttct
cagttttaaaacgtcagtgtacccagcaggagcagaataagaaggaatgt
ttacaagttgttcattgatgagaatctaccttcattttgcttatgtctta
cctttctagtttgttagctattggaaactgtctatctgacacatgtagtc
actaaatactttgtgaatgaaggatgccagggaggaggggccacaggcaa
ggctgctaccttctgtttcaggattaggacctgacaccaagttccactcc
accctgctaactctctggcaaccaaccaactcaggtttttcttagatcag
ttgtgaactatactaatatctgttgcatttccaggaacttctgatttgaa
ttaaagggaaggtagcagagagagataatttagtttgagagaagagaaag
cacattccaggcaaacatttaattatgactaaaggagcagatttaaaaaa
aatatcttattgaagaacaatcatagtgtagtggccatgggaacatatag
gaaagaactggccagaggatattgtagcttagaaaaggcagatgggtttt
aaaactaacacatagtcacaactcatattataggaataaatccttttcag
ggcttattttaaacggagaagagatcatccacaaacattta
gaattctcacctgaggaatcccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactgt
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctaataaaaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgccaaaagcatgaaattcaa
gaagaacaaagaccaaagtatggacactttaccctttcttagaaatggga
acaaaacacccatagaaggagttacagagacaaaattttgagctgtgacg
aaaggatggaccatctagtgactgccatatgcagggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccagttatagctctctcttgtgagactatgccggggccctagcaa
acacagaagttgatgatcacagttcagctattggatgggtcacacggccc
cttaatggaggagctagagaaatttacccaaggagctatagggaactgcc
accctataaggttgtacattatgaactaaccagtacccggcagcttcttg
ttcttttagcttgcatatgtatcaaagatgggctagtcgcccatcactgc
aagagaagctcaatgactgcaaactttaatgcctagtacatggtatcgca
atggctataatgggggaattgggtgtcagcttaagggcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4387784_4388917
seq2: B6Ng01-218C02.b_40_1180 (reverse)

seq1  TAAATGTTTGTGGATGA--TCTTCTCTGTTTAAAATAA-CCCTGAAAGGA  47
      |||||||||||||||||  ||||||| ||||||||||| |||||||| | 
seq2  TAAATGTTTGTGGATGATCTCTTCTCCGTTTAAAATAAGCCCTGAAAAGG  50

seq1  ATTTTATTCCTATATAATGAGTTGTGAACTATGTGTTAGTTTTTAAAACC  97
      | ||||||||||||  |||||||||| |||||||||||||||| ||| ||
seq2  A-TTTATTCCTATAATATGAGTTGTG-ACTATGTGTTAGTTTTAAAACCC  98

seq1  ATCTGC--TTTCTAAGCTACAATATCCTCT-GCCAG-TCTTTCCTATATG  143
      ||||||  |||||||||||||||||||||| ||||| |||||||||||||
seq2  ATCTGCCTTTTCTAAGCTACAATATCCTCTGGCCAGTTCTTTCCTATATG  148

seq1  TTCCCATGGCCACCTACACTATGATTGTTCT--CATAAGATATTTTTTTT  191
      |||||||||||| ||||||||||||||||||   ||||||||||||||||
seq2  TTCCCATGGCCA-CTACACTATGATTGTTCTTCAATAAGATATTTTTTTT  197

seq1  AAATCTGCTCCTTTAGTCATAATTAAATGTTTGCCTGGAATGTGCTTTCT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCTCCTTTAGTCATAATTAAATGTTTGCCTGGAATGTGCTTTCT  247

seq1  CTTCTCTCAAACTAAATTATCTCTCTCTGCTACCTTCCC-TTAATTCAAA  290
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCTCTCAAACTAAATTATCTCTCTCTGCTACCTTCCCTTTAATTCAAA  297

seq1  TCAGAAGTTCCTGGAAATGCAACAGATATTAGTATAGTTCACAACTGATC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGTTCCTGGAAATGCAACAGATATTAGTATAGTTCACAACTGATC  347

seq1  TAAGAAAAACCTGAGTTGGTTGGTTGCCAGAGAGTTAGCAGGGTGGAGTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAACCTGAGTTGGTTGGTTGCCAGAGAGTTAGCAGGGTGGAGTG  397

seq1  GAACTTGGTGTCAGGTCCTAATCCTGAAACAGAAGGTAGCAGCCTTGCCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGGTGTCAGGTCCTAATCCTGAAACAGAAGGTAGCAGCCTTGCCT  447

seq1  GTGGCCCCTCCTCCCTGGCATCCTTCATTCACAAAGTATTTAGTGACTAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCCTCCTCCCTGGCATCCTTCATTCACAAAGTATTTAGTGACTAC  497

seq1  ATGTGTCAGATAGACAGTTTCCAATAGCTAACAAACTAGAAAGGTAAGAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCAGATAGACAGTTTCCAATAGCTAACAAACTAGAAAGGTAAGAC  547

seq1  ATAAGCAAAATGAAGGTAGATTCTCATCAATGAACAACTTGTAAACATTC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAAATGAAGGTAGATTCTCATCAATGAACAACTTGTAAACATTC  597

seq1  CTTCTTATTCTGCTCCTGCTGGGTACACTGACGTTTTAAAACTGAGAAGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATTCTGCTCCTGCTGGGTACACTGACGTTTTAAAACTGAGAAGT  647

seq1  CATCTTGTCATGGAGCCCTTGGGATCTGGAAACTGGAAAACCAACAATAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTCATGGAGCCCTTGGGATCTGGAAACTGGAAAACCAACAATAA  697

seq1  CAACACCAAAATGATGGAGTATATCATTACTCTGTTTCAGTCTCAAAGTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCAAAATGATGGAGTATATCATTACTCTGTTTCAGTCTCAAAGTC  747

seq1  CTCAGCCCGAGTCAGGCCTCCTCTGGCCTGCTGTGACCCCCTTCTCCCAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCGAGTCAGGCCTCCTCTGGCCTGCTGTGACCCCCTTCTCCCAG  797

seq1  CATAGAGGACTCCCCTGGCATCATCCCACAGTTTTCTTCCCTGCCCTTCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGGACTCCCCTGGCATCATCCCACAGTTTTCTTCCCTGCCCTTCA  847

seq1  GCTCCTGAGTACTAATGGAGGTTTTTCATAAGCAGGTATCTGATGGTCTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGAGTACTAATGGAGGTTTTTCATAAGCAGGTATCTGATGGTCTC  897

seq1  ATTCTCTTCCTTGGAGTTCTTCAACATCTTCCTGGTATCTGCCAGTAATT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTCCTTGGAGTTCTTCAACATCTTCCTGGTATCTGCCAGTAATT  947

seq1  TTAATACAAGAGTATGGTTTATAAACAAACTAATATATGTGTGTTGAGAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAAGAGTATGGTTTATAAACAAACTAATATATGTGTGTTGAGAG  997

seq1  ATGGGACTCTAGCTCAGTAGTCCATCACTTGAGTAGCAAATACAAAGCTC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACTCTAGCTCAGTAGTCCATCACTTGAGTAGCAAATACAAAGCTC  1047

seq1  GAAGTTCATCTCCCTCATAGCCTCCCTCCCCCAAAGTATGCTGTCTTCAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCATCTCCCTCATAGCCTCCCTCCCCCAAAGTATGCTGTCTTCAT  1097

seq1  TCTAAATCATTTAAAAATACCACAAGGGGTTATTTTAGGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCATTTAAAAATACCACAAGGGGTTATTTTAGGAATTC  1141