BAC Information

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BAC

Clone NameB6Ng01-219D22
Chromosome18 (Build37)
Map Location 86,164,189 - 86,293,731
singlet/doubletdoublet
Overlap geneLOC545270
Upstream geneLOC100039765, LOC665382, LOC545269
Downstream geneLOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219D22.bB6Ng01-219D22.g
ACCGA035143GA035144
length1,088655
definitionB6Ng01-219D22.b B6Ng01-219D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,164,189 - 86,165,276)(86,293,104 - 86,293,731)
sequence
gaattctcttatctcaggatcttatctcacttcagcgtctttcgacttaa
ggacatacattacaaggtttgactttatgtggatttttgtaaacccaatt
caggctgtttactaattaagaaatctttctatctctgcagaaactaatga
tggacaggcttttaaagatactcagtcctttttaatgtgctgtgtgtggt
gaccaaacctgtaatgaacagctgttatgttcttactctacatttgttgg
actgtacttccaataacctgagaatgaaaatggcttactacttaaaggta
ccacaatttatattagcaaaggacaatcaggtgcatttaaaagttgcaac
gagaacaattgcaaatgatggctaatatagctcagtaattttgaaggaat
attactaataattaaatcaagaataagaggctccactggccagccacctc
tctgcctaccttcatcaaacctgcagaactagaaacataaatgtcatatc
cctttcctttatccaagcactgcctgcaggtcatgtgaagaatattgagc
tgctgggagatttgtcctaccttctgacttccattgtccagctcaaggct
gtccaacagaggctgcctgtacccagagcatttaggttaggcatggcttc
ccaatacctgccacatcaggaaaatcaagggacaaacagatggctaaaag
tcaatgtaaaaagcaaatcaacaaaagccagggcaatatggaacgttcag
agcacaatgaccctactagtgcagtccctggatatcccaacacaaccaaa
gctcaagaaaatgaacttatatataaagtcatataaaaatgatagaataa
tttaaagaagaaaagcataaatcccttaaatcaatacatgagaaatacaa
tcaaaggagtagaggcctttaaagaagaaacaaactaattcctttaaaga
attacaggaaaacacaatttaaacacataaaatatataaaataattcatg
acttgaaaatgggaaataggagcaataaagaaactataatcgagggattc
tgcacatggtaaatctagaaaagagagcagtacaataa
gaattcaccatggataaatgtgtggggatgggaagagagagaaggtacat
ggagagaaagaaagaaagaaagagagagagagagagagagagagagagag
agagagagagaaagaggaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaacgggaggaggatgaggatgaggaggaggccaa
atatctagtttatataagaaagagctagcttctggcagaacagcagccca
gatcctgggctgctgcaaagtttaaggttggggtcagggtggtcaggtag
ggactaaggtttattaggaaagcctggatgccaggtctgctttggtttgt
aaaacgtgcacctcagtcccttgtccctgagaccaaaaccaaacaatgcc
atttttcacaacatgtattctataagtacgttgggtaaaataagtttgtt
tttctggctttcaagttcatggtaagtatgaacatgagactgtttttatc
attcaactgtatctaagtgaattgctgtttcatttacattatccatagtt
ttatctgtttacatttcattctgtttgccctattttaaagtgaagaaaga
tagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86164189_86165276
seq2: B6Ng01-219D22.b_44_1131

seq1  GAATTCTCTTATCTCAGGATCTTATCTCACTTCAGCGTCTTTCGACTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATCTCAGGATCTTATCTCACTTCAGCGTCTTTCGACTTAA  50

seq1  GGACATACATTACAAGGTTTGACTTTATGTGGATTTTTGTAAACCCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATACATTACAAGGTTTGACTTTATGTGGATTTTTGTAAACCCAATT  100

seq1  CAGGCTGTTTACTAATTAAGAAATCTTTCTATCTCTGCAGAAACTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGTTTACTAATTAAGAAATCTTTCTATCTCTGCAGAAACTAATGA  150

seq1  TGGACAGGCTTTTAAAGATACTCAGTCCTTTTTAATGTGCTGTGTGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGGCTTTTAAAGATACTCAGTCCTTTTTAATGTGCTGTGTGTGGT  200

seq1  GACCAAACCTGTAATGAACAGCTGTTATGTTCTTACTCTACATTTGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAACCTGTAATGAACAGCTGTTATGTTCTTACTCTACATTTGTTGG  250

seq1  ACTGTACTTCCAATAACCTGAGAATGAAAATGGCTTACTACTTAAAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACTTCCAATAACCTGAGAATGAAAATGGCTTACTACTTAAAGGTA  300

seq1  CCACAATTTATATTAGCAAAGGACAATCAGGTGCATTTAAAAGTTGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTTATATTAGCAAAGGACAATCAGGTGCATTTAAAAGTTGCAAC  350

seq1  GAGAACAATTGCAAATGATGGCTAATATAGCTCAGTAATTTTGAAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAATTGCAAATGATGGCTAATATAGCTCAGTAATTTTGAAGGAAT  400

seq1  ATTACTAATAATTAAATCAAGAATAAGAGGCTCCACTGGCCAGCCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAATAATTAAATCAAGAATAAGAGGCTCCACTGGCCAGCCACCTC  450

seq1  TCTGCCTACCTTCATCAAACCTGCAGAACTAGAAACATAAATGTCATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTACCTTCATCAAACCTGCAGAACTAGAAACATAAATGTCATATC  500

seq1  CCTTTCCTTTATCCAAGCACTGCCTGCAGGTCATGTGAAGAATATTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTTATCCAAGCACTGCCTGCAGGTCATGTGAAGAATATTGAGC  550

seq1  TGCTGGGAGATTTGTCCTACCTTCTGACTTCCATTGTCCAGCTCAAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAGATTTGTCCTACCTTCTGACTTCCATTGTCCAGCTCAAGGCT  600

seq1  GTCCAACAGAGGCTGCCTGTACCCAGAGCATTTAGGTTAGGCATGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACAGAGGCTGCCTGTACCCAGAGCATTTAGGTTAGGCATGGCTTC  650

seq1  CCAATACCTGCCACATCAGGAAAATCAAGGGACAAACAGATGGCTAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACCTGCCACATCAGGAAAATCAAGGGACAAACAGATGGCTAAAAG  700

seq1  TCAATGTAAAAAGCAAATCAACAAAAGCCAGGGCAATATGGAACGTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAAAAAGCAAATCAACAAAAGCCAGGGCAATATGGAACGTTCAG  750

seq1  AGCACAATGACCCTACTAGTGCAGTCCCTGGATATCCCAACACAACCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATGACCCTACTAGTGCAGTCCCTGGATATCCCAACACAACCAAA  800

seq1  GCTCAAGAAAATGAACTTATATATAAAGTCATATAAAAATGATAGAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGAAAATGAACTTATATATAAAGTCATATAAAAATGATAGAATAA  850

seq1  TTTAAAGAAGAAAAGCATAAATCCCTTAAATCAATACATGAGAAATACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAAGAAAAGCATAAATCCCTTAAATCAATACATGAGAAATACAA  900

seq1  TCAAAGGAGTAGAGGCCTTTAAAGAAGAAACAAACTAATTCC-TTAAAGA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAAAGGAGTAGAGGCCTTTAAAGAAGAAACAAACTAATTCCTTTAAAGA  950

seq1  ATTACAGGAAAACACAA-TTAAACACATAAAATATATAAAATAATTCATG  998
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTACAGGAAAACACAATTTAAACACATAAAATATATAAAATAATTCATG  1000

seq1  ACTTGAAAAT-GGAAATAGGAGCAATAAAGAAACTATAAACCGAGGGAAT  1047
      |||||||||| |||||||||||||||||||||||||| || |||||| ||
seq2  ACTTGAAAATGGGAAATAGGAGCAATAAAGAAACTAT-AATCGAGGG-AT  1048

seq1  CCTGCACATGGAAAATCTAGAAAAGAGAGCAGGTACAATAA  1088
       |||||||||| ||||||||||||||||||| |||||||||
seq2  TCTGCACATGGTAAATCTAGAAAAGAGAGCA-GTACAATAA  1088

seq1: chr18_86293104_86293731
seq2: B6Ng01-219D22.g_92_719 (reverse)

seq1  CACTATC-TTCTTCACTTT-AAATAGGGCAAACAGAATG-AATGTAAACA  47
      ||||||| ||||||||||| ||||||||||||||||||| ||||||||||
seq2  CACTATCTTTCTTCACTTTAAAATAGGGCAAACAGAATGAAATGTAAACA  50

seq1  GATAAAACTATGGATAATGTAAATGAAACAGCAATTCACTTAGATACAGT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACTATGGATAATGTAAATGAAACAGCAATTCACTTAGATACAGT  100

seq1  TGAATGATAAAAACAGTCTCATGTTCATACTTACCATGAACTTGAAAGCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATAAAAACAGTCTCATGTTCATACTTACCATGAACTTGAAAGCC  150

seq1  AGAAAAACAAACTTATTTTACCCAACGTACTTATAGAATACATGTTGTGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAACTTATTTTACCCAACGTACTTATAGAATACATGTTGTGA  200

seq1  AAAATGGCATTGTTTGGTTTTGGTCTCAGGGACAAGGGACTGAGGTGCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCATTGTTTGGTTTTGGTCTCAGGGACAAGGGACTGAGGTGCAC  250

seq1  GTTTTACAAACCAAAGCAGACCTGGCATCCAGGCTTTCCTAATAAACCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAAACCAAAGCAGACCTGGCATCCAGGCTTTCCTAATAAACCTT  300

seq1  AGTCCCTACCTGACCACCCTGACCCCAACCTTAAACTTTGCAGCAGCCCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTACCTGACCACCCTGACCCCAACCTTAAACTTTGCAGCAGCCCA  350

seq1  GGATCTGGGCTGCTGTTCTGCCAGAAGCTAGCTCTTTCTTATATAAACTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGGGCTGCTGTTCTGCCAGAAGCTAGCTCTTTCTTATATAAACTA  400

seq1  GATATTTGGCCTCCTCCTCATCCTCATCCTCCTCCCGTTCTTCTTCTTCT  447
      |||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  GATATTTGGCCTCCTCCTCATCCTCATCCTCCTCCCG---TTCTTCTTCT  447

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  497

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCT  547

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCT  597

seq1  TTCTCTCCATGTACCTTCTCTCTCTTCCCAT  628
      |||||||||||||||||||||||||||||||
seq2  TTCTCTCCATGTACCTTCTCTCTCTTCCCAT  628