BAC Information

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BAC

Clone NameB6Ng01-221K21
Chromosome18 (Build37)
Map Location 33,594,813 - 33,595,826
singlet/doubletsinglet
Overlap genenone
Upstream geneBin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4, Stard4, EG433170
Downstream geneD0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258, Epb4.1l4a, EG666296, Ppia-ps18_318.1, Ppia-ps18_319.1, LOC666313, Apc, Srp19, Reep5, Pkd2l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221K21.bB6Ng01-221K21.g
ACCGA036906GA036907
length1,021812
definitionB6Ng01-221K21.b B6Ng01-221K21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgacccatagaacctgtgggataagaaaaaatatgttttcaat
atgtaaaacgtggtttcaatctctttaggagcaattgataattaagatgg
atggaaataaaataacagagaaatgccaccgattgtcccatctcatgatc
ttttcataatttagcaagtcttaatttagtaaggcaataaaacagagtgt
atcccccatacccattatgcccctccaagcagagtgtatcccccatatcc
gtgatgcccctccaagcagagtgtatcccccatagctgttacaatcctcc
aagcagagtgtatcccccatagctgttacactcctccaagcagagtgtat
cccccatagctgttacactcctccaagcagagtgtatcccccatacccgt
gatgctcctccaagcagtgtgtatctcccatatctgtaatgcccctccaa
gtagagtgtatcccccatagctgcaatgtctctccaagcaaagggaggtt
gttgagtgaggaaaattaggattcctcataagtaaaaagataatcaaata
ataggagaccttcccatgtattcagaggcattaatctctgggtgtgtata
caggtgccagtatctcacctggaatgtgcattaattttgaattaaactca
acatcctcccaatttataagatacctcttgacatgcacaattaggaatga
ggatcttccagaaagcaagaaagcatcttctgtcccccatattgaggagg
acacactcccagagtgtggctggtaagcttctctgttctaccccacccct
aactcactctctctctctctctctctctctctctctctctctctctggct
ttttatttccagaattatgttctttaccctctggttgaggtgtctcagtg
tttatactccaccagctgattttgaaactctgcataagtcaaggtgacgt
ttcagtccctactgattggctgaatgaggtatgctagcaggagtttcttc
atcagtcaagacgtcattcaa
gaattcctacagtgagataagatgcaaagacaggtaaattgcttggaaat
tgacaggtcagataacttggactacagagcacagaagaaaccattggtta
ctaccttgccacaccaaagttactctgaacattgttctttgacctttcta
ttgtgcattatggtgtgtattcatctgcatatacttgttcacacacacac
gtaaataattaatttttttgactattgagatgatcgtgcaatttctttct
gtgagtccattaacatgatggcttatagctaatgatttacatatgataaa
gcatcctcacatctatgtaaggaagctaatgtgatcatgatgaatgatct
ttttgatgtgttattgattttggcttgtgattattttgtgtacctatgtt
caccagggaagttggtttaaaatttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcctcctcttct
tcctcctcttcttcctcttcctcctcttcctcttcttcttcttcttcctc
ctcttcctcttcctctttctcttcttcttctttcttctttcttcttcatt
tttatggaatagtttgagaaatattagtgttagtttttttgtttgaattg
tctgggtaaatttatcagttaatacatgtgggccaggactttaatttact
taatctccttcttattatatctggtaaattatatgaattctggtattata
tttatctaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_33594813_33595826
seq2: B6Ng01-221K21.b_48_1068

seq1  GAATTCCTGACCCATAGAACCTGTGGGATAAGAAAAAATATGTTTTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCCATAGAACCTGTGGGATAAGAAAAAATATGTTTTCAAT  50

seq1  ATGTAAAACGTGGTTTCAATCTCTTTAGGAGCAATTGATAATTAAGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAACGTGGTTTCAATCTCTTTAGGAGCAATTGATAATTAAGATGG  100

seq1  ATGGAAATAAAATAACAGAGAAATGCCACCGATTGTCCCATCTCATGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATAAAATAACAGAGAAATGCCACCGATTGTCCCATCTCATGATC  150

seq1  TTTTCATAATTTAGCAAGTCTTAATTTAGTAAGGCAATAAAACAGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAATTTAGCAAGTCTTAATTTAGTAAGGCAATAAAACAGAGTGT  200

seq1  ATCCCCCATACCCATTATGCCCCTCCAAGCAGAGTGTATCCCCCATATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCATACCCATTATGCCCCTCCAAGCAGAGTGTATCCCCCATATCC  250

seq1  GTGATGCCCCTCCAAGCAGAGTGTATCCCCCATAGCTGTTACAATCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCCCCTCCAAGCAGAGTGTATCCCCCATAGCTGTTACAATCCTCC  300

seq1  AAGCAGAGTGTATCCCCCATAGCTGTTACACTCCTCCAAGCAGAGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGTGTATCCCCCATAGCTGTTACACTCCTCCAAGCAGAGTGTAT  350

seq1  CCCCCATAGCTGTTACACTCCTCCAAGCAGAGTGTATCCCCCATACCCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATAGCTGTTACACTCCTCCAAGCAGAGTGTATCCCCCATACCCGT  400

seq1  GATGCTCCTCCAAGCAGTGTGTATCTCCCATATCTGTAATGCCCCTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCCTCCAAGCAGTGTGTATCTCCCATATCTGTAATGCCCCTCCAA  450

seq1  GTAGAGTGTATCCCCCATAGCTGCAATGTCTCTCCAAGCAAAGGGAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTGTATCCCCCATAGCTGCAATGTCTCTCCAAGCAAAGGGAGGTT  500

seq1  GTTGAGTGAGGAAAATTAGGATTCCTCATAAGTAAAAAGATAATCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTGAGGAAAATTAGGATTCCTCATAAGTAAAAAGATAATCAAATA  550

seq1  ATAGGAGACCTTCCCATGTATTCAGAGGCATTAATCTCTGGGTGTGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGACCTTCCCATGTATTCAGAGGCATTAATCTCTGGGTGTGTATA  600

seq1  CAGGTGCCAGTATCTCACCTGGAATGTGCATTAATTTTGAATTAAACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCCAGTATCTCACCTGGAATGTGCATTAATTTTGAATTAAACTCA  650

seq1  ACATCCTCCCAATTTATAAGATACCTCTTGACATGCACAATTAGGAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCCCAATTTATAAGATACCTCTTGACATGCACAATTAGGAATGA  700

seq1  GGATCTTCCAGAAAGCAAGAAAGCATCTTCTGTCCCCCATATTGAGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTCCAGAAAGCAAGAAAGCATCTTCTGTCCCCCATATTGAGGAGG  750

seq1  ACACACTCCCAGAGTGTGGCTGGTAAGCTTCTCTGTTCTACCCCACCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCCCAGAGTGTGGCTGGTAAGCTTCTCTGTTCTACCCCACCCCT  800

seq1  AACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGC-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCT  850

seq1  TTTTATTT-CAGAATTATGTTCTTTACCCTCTGG-TGAGGTGTCTCAGTG  897
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTATTTCCAGAATTATGTTCTTTACCCTCTGGTTGAGGTGTCTCAGTG  900

seq1  TTTATACTCCACCAGCTGATTTTGAAACTCTTGCATAAGTCAAGGTGACG  947
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTATACTCCACCAGCTGATTTTGAAACTC-TGCATAAGTCAAGGTGACG  949

seq1  TTTCAGTCCC-AC-GA-TGGCTGAATGAGGAATGC-AGCAGGAGTTTC-T  992
      |||||||||| || || ||||||||||||| |||| |||||||||||| |
seq2  TTTCAGTCCCTACTGATTGGCTGAATGAGGTATGCTAGCAGGAGTTTCTT  999

seq1  CAACAGTCAAGACGTCAGTCAA  1014
      || |||||||||||||| ||||
seq2  CATCAGTCAAGACGTCATTCAA  1021