BAC Information

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BAC

Clone NameB6Ng01-223D13
Chromosome18 (Build37)
Map Location 75,963,310 - 75,964,327
singlet/doubletsinglet
Overlap genenone
Upstream geneAcaa2, LOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7, Gm672
Downstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223D13.bB6Ng01-223D13.g
ACCGA038027GA038028
length1,1131,021
definitionB6Ng01-223D13.b B6Ng01-223D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcgtacacctgagctcagttctaaatgggacaaaaacagctgg
aagcttacaggcgaggcccagcaggagggaactgctatagatagaaatat
ctaagaacgcaatcagatagcaagggtaagaactttgctaacccggtgga
acgggattcttgcttaggggcagaccttggcctagacacccagggtgggg
gattcttgatgctctggcttagcaagattctctgctaaaactggactaaa
gccagtctcatagaggactgggagccagctgcttggggttaggtggtggc
aggaagtgcctttctgaagatgatagatgtaaataatatggacacagaca
tgatccatgcagaaacacaacccttacctcgaagggaataagaaatgggt
tatcctggagccaaatctgagtgaccatggcctgggaacctagattcaga
gcttaccacaaaggccacgttccaataggatacgttttctgaagttagtt
tgacaaagtggaagaaagtcatatgccaaggcattcttcaaagacattgg
tgggagcacggggaagctgctgggagcaccgatgggagccccaggaagct
gctgggagcacagagaagctggtgacaacgcggtgggaaacctctcttga
gggttcaggtgtgatctgagggcgtagctagggggttggtgaaagctagt
gatctgtcaatgcatgtcaacaggcaacatgtcagaggacgttatgtcat
atgcagaggacattatgtcatatgcagaggtgggtagtgaacggctactt
agaaagcccaagacatttggctccaggtcttcaacacacagccatctaca
atcacagaaattccaaccagccaatcagcctagtagagtctttaccaccc
catatggggggttttgtacgtttctttctgagaatggtcagtttatgact
tttaatatttacatgaatatcccctatgttgtctatccacatacatgttg
catattgccctaatcagttgtatgcttacagaacaacttaaaaacatgtt
ctattgctcgtgcctctgagctggagttcaggaaccaaggacagtagatt
cctcctgccctgt
gaattcacagcaggggctgatgggctaggaacggtgcaagctaaaggaga
tgattccatctcttacctgaagactttaatctggaggtgtaaagatgcta
tcatccaggtgtggtggcatgtgcctgcagtaccaacccaaggctcgaag
atcatgagttcaaggacaactaggctgcataataaaaatacaaaacaaaa
caaaactaagaaaatacattgtcaaagaaatcatgggaataaggtcatag
tggggaccatgagagagagagagagagagagagagagagagagagagaga
gagacagagacagagacagagagagacagagagagacagagagagagaga
gagaaggatgctgttctttgtagagccaaagaaggcttggccacagtgag
cacatctgctccttgctcaataggcagggttatggagtctttaggcatac
aggcaacaagacattgtaggcacctactaagtgccaggctctgtgtagga
tcctagaaacacaaagataaggaagtggtattccctaggttgctcagaag
gttattggcaggaaccaatgccgtctggttagtctgggttggtaggtcca
ctgtattgtgctggcagtgacacactccatgagtctttcttctcccatgt
gggaaggtctactctacccattgtggcctctgaatccttcttgacataac
taccaggcactggctatccatcagtcaggcttggctcagaaagtatttac
ttcccagacaatggggggctgtaaatgttaacaatgtaacacgtgttgta
gtgagtcttcagcatatagcctaagacgtggctcctaaaggataagacac
tttgtagtttaggaacttctaggtccctatcatgatgtcccttttaatac
tggtttactgggcaactttgaaagttcatgatttatgggacacaacttcc
ttttttttagcggcagtggatcccttatcagcatctctcaatagaggcac
aaacagtaaacccagaccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75963310_75964327
seq2: B6Ng01-223D13.g_64_1084

seq1  GAATTCACAGCAGGGGCTGATGGGCTAGGAACGGTGCAAGCTAAAGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAGGGGCTGATGGGCTAGGAACGGTGCAAGCTAAAGGAGA  50

seq1  TGATTCCATCTCTTACCTGAAGACTTTAATCTGGAGGTGTAAAGATGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCATCTCTTACCTGAAGACTTTAATCTGGAGGTGTAAAGATGCTA  100

seq1  TCATCCAGGTGTGGTGGCATGTGCCTGCAGTACCAACCCAAGGCTCGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGGTGTGGTGGCATGTGCCTGCAGTACCAACCCAAGGCTCGAAG  150

seq1  ATCATGAGTTCAAGGACAACTAGGCTGCATAATAAAAATACAAAACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGTTCAAGGACAACTAGGCTGCATAATAAAAATACAAAACAAAA  200

seq1  CAAAACTAAGAAAATACATTGTCAAAGAAATCATGGGAATAAGGTCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAAGAAAATACATTGTCAAAGAAATCATGGGAATAAGGTCATAG  250

seq1  TGGGGACCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300

seq1  GAGACAGAGACAGAGACAGAGAGAGACAGAGAGAGACAGAGAGAGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGAGACAGAGAGAGACAGAGAGAGACAGAGAGAGAGAGA  350

seq1  GAGAAGGATGCTGTTCTTTGTAGAGCCAAAGAAGGCTTGGCCACAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGATGCTGTTCTTTGTAGAGCCAAAGAAGGCTTGGCCACAGTGAG  400

seq1  CACATCTGCTCCTTGCTCAATAGGCAGGGTTATGGAGTCTTTAGGCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGCTCCTTGCTCAATAGGCAGGGTTATGGAGTCTTTAGGCATAC  450

seq1  AGGCAACAAGACATTGTAGGCACCTACTAAGTGCCAGGCTCTGTGTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAAGACATTGTAGGCACCTACTAAGTGCCAGGCTCTGTGTAGGA  500

seq1  TCCTAGAAACACAAAGATAAGGAAGTGGTATTCCCTAGGTTGCTCAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAAACACAAAGATAAGGAAGTGGTATTCCCTAGGTTGCTCAGAAG  550

seq1  GTTATTGGCAGGAACCAATGCCGTCTGGTTAGTCTGGGTTGGTAGGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGCAGGAACCAATGCCGTCTGGTTAGTCTGGGTTGGTAGGTCCA  600

seq1  CTGTATTGTGCTGGCAGTGACACACTCCATGAGTCTTTCTTCTCCCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGTGCTGGCAGTGACACACTCCATGAGTCTTTCTTCTCCCATGT  650

seq1  GGGAAGGTCTACTCTACCCATTGTGGCCTCTGAATCCTTCTTGACATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGTCTACTCTACCCATTGTGGCCTCTGAATCCTTCTTGACATAAC  700

seq1  TACCAGGCACTGGCTATCCATCAGTCAGGCTTGGCTCAGAAAGTATTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGCACTGGCTATCCATCAGTCAGGCTTGGCTCAGAAAGTATTTAC  750

seq1  TTCCCAGACAAT-GGGGGCTGT-AATGTTAACAATGTAACACGTGTTGTA  798
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  TTCCCAGACAATGGGGGGCTGTAAATGTTAACAATGTAACACGTGTTGTA  800

seq1  GTGAGTCTTCAGCATATAGCCTAGGACGTGGCTCCTAAAGGATAGGACAC  848
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  GTGAGTCTTCAGCATATAGCCTAAGACGTGGCTCCTAAAGGATAAGACAC  850

seq1  TTTGTAGTTTAGGAACTTCTAGGTCCCTATCATGATGTCCCTTTTAATAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTTTAGGAACTTCTAGGTCCCTATCATGATGTCCCTTTTAATAC  900

seq1  TGGTTTACT-GGCAACTTGGAAAAGTCATGATTTATGGGAACACAACTTC  947
      ||||||||| |||||||| ||||  |||||||||||||| ||||||||||
seq2  TGGTTTACTGGGCAACTTTGAAAGTTCATGATTTATGGG-ACACAACTTC  949

seq1  C-TTTTTTTAGCGGCAGTGGAT--CTTATCCAGCATCTCTCAAATAGAGG  994
      | ||||||||||||||||||||  ||||| ||||||||||| ||||||||
seq2  CTTTTTTTTAGCGGCAGTGGATCCCTTAT-CAGCATCTCTC-AATAGAGG  997

seq1  CACCAACAGGAAAACCAGACCCTG  1018
      ||| ||||| ||| ||||||||||
seq2  CACAAACAGTAAACCCAGACCCTG  1021