BAC Information

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BAC

Clone NameB6Ng01-224O11
Chromosome18 (Build37)
Map Location 32,773,393 - 32,880,813
singlet/doubletdoublet
Overlap geneLOC100041170
Upstream geneSap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160
Downstream geneTslp, Wdr36, Camk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224O11.bB6Ng01-224O11.g
ACCGA039235GA039236
length1,130987
definitionB6Ng01-224O11.b B6Ng01-224O11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,879,681 - 32,880,813)(32,773,393 - 32,774,161)
sequence
gaattctctgaactgccatgatcatggaatagatctactccacagtttag
acttaaaaagtttattactaacacggcatggactcttgttaacaaagcct
ccccagtgtgttctgtaagggttggacaactggaaaaaaaactaaatata
tatgtgtatgtatatatatatatatatatatatatgaattagatgttggt
tatgattaccaatatctgggaagtaggaagccctagccaagaatgtctat
aaaacaggaacagatgtcatacagttgagtaagaagacctctacatttat
atctgttgtcttgatcagtaagaacaagtttcttcaaccacctacataat
ttgcttcttattgacatgcaaagaaactgcctgatttattctcaccagaa
agtgtaattatcttctccatatagtttgtgcttaaggtagggctagagta
gaaaatgataatgagaaacacttcatggggtcaataatttgatctgccat
taagtctgaatggaaccaatgtgactggattttgtcagttgattctgtaa
tactaaaactttaaatcttcagtgtcattctactttttcttgtaacaaaa
tacctatggctgggtaatatataaagaacagagatctatcctggtgagtg
gcttctggatatattccaccgtggtgggcgacattctggtgaaaatactt
gcaagagagtagtcatatggcaagatatgaagctagaggaattcaacaat
aaggttttctctttttgtaacaacacaacttcacaggaaactcatgtgta
acaagacactgactaaactctcccaaatgttttgcctctatcaaatgacc
attaatccccctccaaagatttcttctgtgacaacattaaagccaagctg
ctaacatgccaaattcaaggggatacacactgatgataacacagataaga
ctcagttaagctcagttttttattgctatgattgccacattgattgacaa
accatggagccatgatattcttggaaccatagcaatcgaatatctatgac
tagaagcccagttacgtagaacagttttacttgacaggcccaaaattcaa
aacgataataagaatatcacactaaatatg
gaattcagtgattatggttttaagcatccatagagggtcagtgtgggagg
tcttggaacctgtcacctgaagacaagaggactgctacaaattcaaaatg
tgtttgtatatgtgtatactttggtcatcttagataaaaaaaaccttcaa
aagggtagggatttcagcttgtttctgtatatttagtactagaaatgctg
cctgacatattgcagttgcttacaaagcatttattaaatacaccagttta
taacccatttcagggaaaagagacggaacatagttgacagagtgattgcc
tagcattcacaaaaacctgggttccccaccgttgtggaataacctggtgt
ggtggtggcacatctccataacctcaggattggaggtggaaggagcagaa
gttcaaggccattgtcttagtcagggcttgtattcctgcacaaaacatca
tgaccaagaagcaagttggggagaaaaggttttatttagcttacacttcc
acattgctgttcatcaccaaaggaggtcaggactggaactcacacagggc
aaaaaattggagctgatgcagagaccatggtggggtgcttcttactggct
tgcctcccctggcttgctcagcttgctttcttatagaacccaggactagc
agcccagggatggcactacccacaaaggactgggcccttcccccttgatc
actaattgagaaaatgcattttctcaagggaggctactactttctctgtg
acaactccagcttgtgtcaacttgacacacaaacacatcactattaagcc
tcaaccctttacttttctttttcatcctcaagatctaaataactttaaaa
gtcccacactccttacaaattcttacatattaaaaattaaatcattttaa
aagatccaatttcctttgaaattcaaaatcttttacaattcaaagtcctc
taactggtgggctccactaaaaatacttcttatttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32879681_32880813
seq2: B6Ng01-224O11.b_50_1179 (reverse)

seq1  CATATTTACTGTGATATTCTTTATTATCTGTTTAGATTTTGGGCTGTTCA  50
      |||||||| |||||||||| ||||||||  |||  |||||||||   |||
seq2  CATATTTAGTGTGATATTC-TTATTATCGTTTTGAATTTTGGGCCTGTCA  49

seq1  AGT-AAACTG-TCTACTGTAACTTGGCTTCTAGTCATAGTATTTCGATTG  98
      ||| |||||| ||||| |||||| |||||||||||||||   ||||||||
seq2  AGTAAAACTGTTCTAC-GTAACTGGGCTTCTAGTCATAGATATTCGATTG  98

seq1  CTATGGTTCCAAGAATATCATGGCTCCAATGTTTTGTCAATCAATGTTGC  148
      ||||||||||||||||||||||||||| ||| ||||||||||||||| ||
seq2  CTATGGTTCCAAGAATATCATGGCTCC-ATGGTTTGTCAATCAATGTGGC  147

seq1  AATCATAGCAATTAAAAACTGGGCTTAACTGAGTCTTATCTGTGTTATCA  198
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  AATCATAGCAATAAAAAACTGAGCTTAACTGAGTCTTATCTGTGTTATCA  197

seq1  TCAGTGTGTATCCCCTTGAATTTGGCATGTTAGCAGCTTGGCTTTAATTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCAGTGTGTATCCCCTTGAATTTGGCATGTTAGCAGCTTGGCTTTAA-TG  246

seq1  TTGTCACAGAAGAATCTTTTGGAGGGGGATTTAATGGTCATTTGATAGAG  298
      ||||||||||||||   |||||||||||| ||||||||||||||||||||
seq2  TTGTCACAGAAGAAATCTTTGGAGGGGGA-TTAATGGTCATTTGATAGAG  295

seq1  GCAAAACATTTGGGAGAGTTTAGTCAGTGTTCTTGTTACACATGAG-TTC  347
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  GCAAAACATTTGGGAGAGTTTAGTCAGTG-TCTTGTTACACATGAGTTTC  344

seq1  CTGTGAAGTTGTGTTGTTACAAAAAGAGAAAACCTTATTGTTGAATTCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGTTGTGTTGTTACAAAAAGAGAAAACCTTATTGTTGAATTCCT  394

seq1  CTAGCTTCATATCTTGCCATATGACTACTCTCTTGCAAGTATTTTCACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTCATATCTTGCCATATGACTACTCTCTTGCAAGTATTTTCACCA  444

seq1  GAATGTCGCCCACCACGGTGGAATATATCCAGAAGCCACTCACCAGGATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCGCCCACCACGGTGGAATATATCCAGAAGCCACTCACCAGGATA  494

seq1  GATCTCTGTTCTTTATATATTACCCAGCCATAGGTATTTTGTTACAAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGTTCTTTATATATTACCCAGCCATAGGTATTTTGTTACAAGAA  544

seq1  AAAGTAGAATGACACTGAAGATTTAAAGTTTTAGTATTACAGAATCAACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAATGACACTGAAGATTTAAAGTTTTAGTATTACAGAATCAACT  594

seq1  GACAAAATCCAGTCACATTGGTTCCATTCAGACTTAATGGCAGATCAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATCCAGTCACATTGGTTCCATTCAGACTTAATGGCAGATCAAAT  644

seq1  TATTGACCCCATGAAGTGTTTCTCATTATCATTTTCTACTCTAGCCCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCCCATGAAGTGTTTCTCATTATCATTTTCTACTCTAGCCCTAC  694

seq1  CTTAAGCACAAACTATATGGAGAAGATAATTACACTTTCTGGTGAGAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCACAAACTATATGGAGAAGATAATTACACTTTCTGGTGAGAATA  744

seq1  AATCAGGCAGTTTCTTTGCATGTCAATAAGAAGCAAATTATGTAGGTGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCAGTTTCTTTGCATGTCAATAAGAAGCAAATTATGTAGGTGGT  794

seq1  TGAAGAAACTTGTTCTTACTGATCAAGACAACAGATATAAATGTAGAGGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAACTTGTTCTTACTGATCAAGACAACAGATATAAATGTAGAGGT  844

seq1  CTTCTTACTCAACTGTATGACATCTGTTCCTGTTTTATAGACATTCTTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACTCAACTGTATGACATCTGTTCCTGTTTTATAGACATTCTTGG  894

seq1  CTAGGGCTTCCTACTTCCCAGATATTGGTAATCATAACCAACATCTAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCTTCCTACTTCCCAGATATTGGTAATCATAACCAACATCTAATT  944

seq1  CATATATATATATATATATATATATACATACACATATATATTTAGTTTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATATATATATACATACACATATATATTTAGTTTTT  994

seq1  TTTCCAGTTGTCCAACCCTTACAGAACACACTGGGGAGGCTTTGTTAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTTGTCCAACCCTTACAGAACACACTGGGGAGGCTTTGTTAACA  1044

seq1  AGAGTCCATGCCGTGTTAGTAATAAACTTTTTAAGTCTAAACTGTGGAGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCATGCCGTGTTAGTAATAAACTTTTTAAGTCTAAACTGTGGAGT  1094

seq1  AGATCTATTCCATGATCATGGCAGTTCAGAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||
seq2  AGATCTATTCCATGATCATGGCAGTTCAGAGAATTC  1130

seq1: chr18_32773393_32774161
seq2: B6Ng01-224O11.g_73_841

seq1  GAATTCAGTGATTATGGTTTTAAGCATCCATAGAGGGTCAGTGTGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGATTATGGTTTTAAGCATCCATAGAGGGTCAGTGTGGGAGG  50

seq1  TCTTGGAACCTGTCACCTGAAGACAAGAGGACTGCTACAAATTCAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAACCTGTCACCTGAAGACAAGAGGACTGCTACAAATTCAAAATG  100

seq1  TGTTTGTATATGTGTATACTTTGGTCATCTTAGATAAAAAAAACCTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTATATGTGTATACTTTGGTCATCTTAGATAAAAAAAACCTTCAA  150

seq1  AAGGGTAGGGATTTCAGCTTGTTTCTGTATATTTAGTACTAGAAATGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTAGGGATTTCAGCTTGTTTCTGTATATTTAGTACTAGAAATGCTG  200

seq1  CCTGACATATTGCAGTTGCTTACAAAGCATTTATTAAATACACCAGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATATTGCAGTTGCTTACAAAGCATTTATTAAATACACCAGTTTA  250

seq1  TAACCCATTTCAGGGAAAAGAGACGGAACATAGTTGACAGAGTGATTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCATTTCAGGGAAAAGAGACGGAACATAGTTGACAGAGTGATTGCC  300

seq1  TAGCATTCACAAAAACCTGGGTTCCCCACCGTTGTGGAATAACCTGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTCACAAAAACCTGGGTTCCCCACCGTTGTGGAATAACCTGGTGT  350

seq1  GGTGGTGGCACATCTCCATAACCTCAGGATTGGAGGTGGAAGGAGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGCACATCTCCATAACCTCAGGATTGGAGGTGGAAGGAGCAGAA  400

seq1  GTTCAAGGCCATTGTCTTAGTCAGGGCTTGTATTCCTGCACAAAACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGCCATTGTCTTAGTCAGGGCTTGTATTCCTGCACAAAACATCA  450

seq1  TGACCAAGAAGCAAGTTGGGGAGAAAAGGTTTTATTTAGCTTACACTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGAAGCAAGTTGGGGAGAAAAGGTTTTATTTAGCTTACACTTCC  500

seq1  ACATTGCTGTTCATCACCAAAGGAGGTCAGGACTGGAACTCACACAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTGTTCATCACCAAAGGAGGTCAGGACTGGAACTCACACAGGGC  550

seq1  AAAAAATTGGAGCTGATGCAGAGACCATGGTGGGGTGCTTCTTACTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGGAGCTGATGCAGAGACCATGGTGGGGTGCTTCTTACTGGCT  600

seq1  TGCCTCCCCTGGCTTGCTCAGCTTGCTTTCTTATAGAACCCAGGACTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCCTGGCTTGCTCAGCTTGCTTTCTTATAGAACCCAGGACTAGC  650

seq1  AGCCCAGGGATGGCACTACCCACAAAGGACTGGGCCCTTCCCCCTTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGGATGGCACTACCCACAAAGGACTGGGCCCTTCCCCCTTGATC  700

seq1  ACTAATTGAGAAAATGCATTTTCTCAAGGGAGGCTACTACTTTCTCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTGAGAAAATGCATTTTCTCAAGGGAGGCTACTACTTTCTCTGTG  750

seq1  ACAACTCCAGCTTGTGTCA  769
      |||||||||||||||||||
seq2  ACAACTCCAGCTTGTGTCA  769