BAC Information

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BAC

Clone NameB6Ng01-225M11
Chromosome18 (Build37)
Map Location 18,421,035 - 18,422,197
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225M11.bB6Ng01-225M11.g
ACCGA039885GA039886
length1,156192
definitionB6Ng01-225M11.b B6Ng01-225M11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgacaacaaacccttcaacaaaataacattgtcaatgattt
tagcggtaatgctatgcaatggctatatcagcatagctgaacagtttact
gtgctctcaaacttgtaggacattattaaaatcttaaactgtcttttctt
tgtacacaacagttataggtagatgcgtctttattgtgtaaaaattatgg
tccaaaaggattaaggaattataatgggaggctcaattaatacacagaaa
gtaaaactctcattagctacattaatttcatgcaactgtccagaagtaaa
cccccgccctcctgaatctttttctcattccctgactcactctttaatct
ttgtgtggcttcttttcaatatctcatccctaggctgcttatcttttgac
aaattactacataatttgatcacattaaacaaagataatgagaactgtct
aaagacatcttcctgaaatttatttcataagccttaaaggaatttaatta
ctgggctaggaggaaacaagcaagaataatcaagcttttgaaataaaatg
tttcagataataaaatatttaattggtttcaaaacattgcaatgcatatt
tcaaaactaaaactgcacattgtcattcacataacataaaattgatatac
atagttatcaaattatagatgatttttcattcataattgttagtactagc
taccaacttcattacttgacacattaagattgctattttgtcttttgcaa
ttttgcctcattttattgaaaaacacaatgacgaaaattaccctttaaag
taatccaggttgtgttttaagtaatggaccagtgtcatttctatcttgaa
aatttggaataaaagccattcagcaaattaacaacagaagaatttagtac
attgtattgaaagtttgagataatttcatattagaatgtacgggcattgt
gaaatatgaagatagttgctgccatgctgacacttcatttcaattaccag
gacccatgatatggtggaaaggggaaccatcttcttcatatgccttttat
tgccttggcaaaaaattctggttccaccccacttactacatcatttaaat
ggaattaatgcattgatacatataatttataataaatcagattttactgt
gttttt

catgttgatctcattttgtagctgtgtaggccacccatcagctcctgaga
tattcaatttggttgtgaagagcatctgcagcatctgctgacaatcattc
caagtaggctgatgagagaacataaggaacttgaccaaccctgtgaggca
ttggggatcctctgagaaaagtgtggggggtggtggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18421035_18422197
seq2: B6Ng01-225M11.b_46_1201

seq1  GAATTCTTATGACAACAAACCCTTCAACAAAATAACATTGTCAATGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGACAACAAACCCTTCAACAAAATAACATTGTCAATGATTT  50

seq1  TAGCGGTAATGCTATGCAATGGCTATATCAGCATAGCTGAACAGTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGTAATGCTATGCAATGGCTATATCAGCATAGCTGAACAGTTTACT  100

seq1  GTGCTCTCAAACTTGTAGGACATTATTAAAATCTTAAACTGTCTTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTCAAACTTGTAGGACATTATTAAAATCTTAAACTGTCTTTTCTT  150

seq1  TGTACACAACAGTTATAGGTAGATGCGTCTTTATTGTGTAAAAATTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAACAGTTATAGGTAGATGCGTCTTTATTGTGTAAAAATTATGG  200

seq1  TCCAAAAGGATTAAGGAATTATAATGGGAGGCTCAATTAATACACAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGATTAAGGAATTATAATGGGAGGCTCAATTAATACACAGAAA  250

seq1  GTAAAACTCTCATTAGCTACATTAATTTCATGCAACTGTCCAGAAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTCTCATTAGCTACATTAATTTCATGCAACTGTCCAGAAGTAAA  300

seq1  CCCCCGCCCTCCTGAATCTTTTTCTCATTCCCTGACTCACTCTTTAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCCCTCCTGAATCTTTTTCTCATTCCCTGACTCACTCTTTAATCT  350

seq1  TTGTGTGGCTTCTTTTCAATATCTCATCCCTAGGCTGCTTATCTTTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGCTTCTTTTCAATATCTCATCCCTAGGCTGCTTATCTTTTGAC  400

seq1  AAATTACTACATAATTTGATCACATTAAACAAAGATAATGAGAACTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTACATAATTTGATCACATTAAACAAAGATAATGAGAACTGTCT  450

seq1  AAAGACATCTTCCTGAAATTTATTTCATAAGCCTTAAAGGAATTTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATCTTCCTGAAATTTATTTCATAAGCCTTAAAGGAATTTAATTA  500

seq1  CTGGGCTAGGAGGAAACAAGCAAGAATAATCAAGCTTTTGAAATAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAGGAGGAAACAAGCAAGAATAATCAAGCTTTTGAAATAAAATG  550

seq1  TTTCAGATAATAAAATATTTAATTGGTTTCAAAACATTGCAATGCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATAATAAAATATTTAATTGGTTTCAAAACATTGCAATGCATATT  600

seq1  TCAAAACTAAAACTGCACATTGTCATTCACATAACATAAAATTGATATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTAAAACTGCACATTGTCATTCACATAACATAAAATTGATATAC  650

seq1  ATAGTTATCAAATTATAGATGATTTTTCATTCATAATTGTTAGTACTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTATCAAATTATAGATGATTTTTCATTCATAATTGTTAGTACTAGC  700

seq1  TACCAACTTCATTACTTGACACATTAAGATTGCTATTTTGTCTTTTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACTTCATTACTTGACACATTAAGATTGCTATTTTGTCTTTTGCAA  750

seq1  TTTTGCCTCATTTTATTGAAAAACACAATGACGAAAATTACCCTTTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTCATTTTATTGAAAAACACAATGACGAAAATTACCCTTTAAAG  800

seq1  TAATCCAGGTTGTGTTTTAAGTAATGGACCAGTGTCATTTCTATCTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAGGTTGTGTTTTAAGTAATGGACCAGTGTCATTTCTATCTTGAA  850

seq1  AATTTGGAATAAAAGCCATTCAGCAAATTAACAACAGAAGAATTTAGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAATAAAAGCCATTCAGCAAATTAACAACAGAAGAATTTAGTAC  900

seq1  ATTGTATTGAAAGTTTGAGATAATTTCATATTAGAATGTACGGGCATTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTGAAAGTTTGAGATAATTTCATATTAGAATGTACGGGCATTGT  950

seq1  GAAATATGAAGATAGTTGCTGCCATGCTGACAACTTCATTTCAATTACCA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAATATGAAGATAGTTGCTGCCATGCTGAC-ACTTCATTTCAATTACCA  999

seq1  GGACCCATGATATGGTGGAAAGGGGAACCATCTCCTTCATAATGCTTTTT  1050
      ||||||||||||||||||||||||||||||||| |||||| |||| ||||
seq2  GGACCCATGATATGGTGGAAAGGGGAACCATCTTCTTCAT-ATGCCTTTT  1048

seq1  AATGCCTTGGCAAAAAAATCTG--TCCACCCCCACTACATACATCAATTA  1098
      | ||||||||||||||| ||||  |||| |||||||   ||||||| |||
seq2  ATTGCCTTGGCAAAAAATTCTGGTTCCA-CCCCACTTACTACATCATTTA  1097

seq1  AAT-GAATAAATGCAATTGATACATATAATTTATAAATAAAATCAAGATT  1147
      ||| |||| ||||| |||||||||||||||||||||   ||||| |||||
seq2  AATGGAATTAATGC-ATTGATACATATAATTTATAA--TAAATC-AGATT  1143

seq1  TTTTAAGTGTGTTTTT  1163
      ||   | |||||||||
seq2  TT---ACTGTGTTTTT  1156


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