BAC Information

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BAC

Clone NameB6Ng01-227K14
Chromosome18 (Build37)
Map Location 27,006,236 - 27,141,518
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041263, LOC100041274
Downstream geneEG665977, EG665646
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227K14.bB6Ng01-227K14.g
ACCGA041275GA041276
length9721,183
definitionB6Ng01-227K14.b B6Ng01-227K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,140,961 - 27,141,518)(27,006,236 - 27,007,432)
sequence
gaattcctcatggattctcttccatatttttgcttgagtgttttatcata
tacagaaaaagaaccagagaagagtagtacacagttagatattatttctt
tttttgtaaaacatcattgatcatatgtaagtatttactttatagttcat
tttttgtacatgcattattatgtgtgtggggaaatgggggacctacttca
tgtaactgcatatagtaattagtgctctgattttctagttgattgaaaaa
ttgcagataacaatgcctggaaatatattagagagaacttactgttttgc
ataaatttaaaactttgtaaggaataaatttagttttaggagtttgtcat
ttttcgattcttacatagaagcagttgctaaagactgctgtctgctgtac
cagaaaacttcaagagctgtgcccagttacccatacaaaacaagcctgaa
gaggccatcacttttagccaggtagtactcccagtggagtgataagtata
ccaacctacccacaatacttttgattctagatttccattctgtctaaaag
aaatgcaagtaaaaagatggagcagaaactgagggaataaccaacaaata
accagctctacttaagacctatccaatgggtaagcactactccctgacac
tattaatgatactctgttctgcatatcattaactgtccttcaagatgctt
cacctagcacctgacctagacagaagcagacacacctacaaacaatcatt
ggaaggagcttgctgactcctatggaagatttgggggaaggattgagtgc
cctgaaggggacaggaactccacaggaaaaccaatagaatcaactaacat
ggaccgttgagggctctcagagactgtacagcctaagattacccacaggc
tagacctgtgagcaaatgtgcaggttaatctctatttgggtcccccacca
actggatcaggattctctcaaa

gaattcctgctacagtcttctcgttttatttttaaaaatcctatgattta
aatattaggataatagcaataacagaaattaacctaggtatgtttaataa
agcacaacaagagcaaaactagttcatttatagtaggatgggcacccaag
aaagtgacatttgcattgagatccatgaccatgccaaagaatgagaattt
tatgcagaggtaggagcaggcagcaattcatgagttaagaggaatataaa
gatcagaggggcaaaacactgaggatagggctttcaggacttgtatgata
ctttaaatacatttttcataagtatcaaatacaaatgaatattaagcaga
gtatcagtagaaaataatattcagatcaagccttaattacagaaattttc
aaataattgtacttatgtgaatgtctattcttatatgatcattacatttt
ttcagacttacaatagttaattatgtattcaaatcaatcttgaggaaaat
attcagtgttgtagctgaggccatgactccagaaacacagcagaatggag
aacttggcctagtcattgaaaagagaaggacattattttactgtggtaaa
aattattgattaaaaaataatttgattctaaaataaatgctttctgggtt
ttttttaagtccttattttttaataatagaccatcaagtgcttactccac
tactctctgaaataaagacaccccaggtggtttctaaatcactctgtagc
tagtcttgcttctagctttctgatggagcatcattgctcagctggtgaag
actcttgagctttcagagaaaaagatgggatgatattgtgaaaaactcct
tcatcattagcctaacccagttgatgaatggctgctcaagatttcagctt
ctcttcccattttcctcagagaaagagagaattcatgatgaaaggccaat
gttgtctgatgggagtttccacttaataaaagtactaagggttagaaaac
atggtaatctttgcagagagaaaggtgaccccattgtgtgctttgtggtg
tcttacactgggaaaaataaacatagcctaaatctcatcttttggtgtaa
tgtaccacatatctctatccataactttgaaggactctggaatttcagct
accgctatataataagctctgtgaaacataatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27140961_27141518
seq2: B6Ng01-227K14.b_45_602 (reverse)

seq1  TTGCATTTCTTTTAGACAGAATGGAAATCTAGAATCAAAAGTATTGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCTTTTAGACAGAATGGAAATCTAGAATCAAAAGTATTGTGGG  50

seq1  TAGGTTGGTATACTTATCACTCCACTGGGAGTACTACCTGGCTAAAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGGTATACTTATCACTCCACTGGGAGTACTACCTGGCTAAAAGTG  100

seq1  ATGGCCTCTTCAGGCTTGTTTTGTATGGGTAACTGGGCACAGCTCTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCTTCAGGCTTGTTTTGTATGGGTAACTGGGCACAGCTCTTGAA  150

seq1  GTTTTCTGGTACAGCAGACAGCAGTCTTTAGCAACTGCTTCTATGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGGTACAGCAGACAGCAGTCTTTAGCAACTGCTTCTATGTAAGA  200

seq1  ATCGAAAAATGACAAACTCCTAAAACTAAATTTATTCCTTACAAAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAAAATGACAAACTCCTAAAACTAAATTTATTCCTTACAAAGTTTT  250

seq1  AAATTTATGCAAAACAGTAAGTTCTCTCTAATATATTTCCAGGCATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATGCAAAACAGTAAGTTCTCTCTAATATATTTCCAGGCATTGTT  300

seq1  ATCTGCAATTTTTCAATCAACTAGAAAATCAGAGCACTAATTACTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAATTTTTCAATCAACTAGAAAATCAGAGCACTAATTACTATATG  350

seq1  CAGTTACATGAAGTAGGTCCCCCATTTCCCCACACACATAATAATGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACATGAAGTAGGTCCCCCATTTCCCCACACACATAATAATGCATG  400

seq1  TACAAAAAATGAACTATAAAGTAAATACTTACATATGATCAATGATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAATGAACTATAAAGTAAATACTTACATATGATCAATGATGTTT  450

seq1  TACAAAAAAAGAAATAATATCTAACTGTGTACTACTCTTCTCTGGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAAAGAAATAATATCTAACTGTGTACTACTCTTCTCTGGTTCTT  500

seq1  TTTCTGTATATGATAAAACACTCAAGCAAAAATATGGAAGAGAATCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATATGATAAAACACTCAAGCAAAAATATGGAAGAGAATCCATG  550

seq1  AGGAATTC  558
      ||||||||
seq2  AGGAATTC  558


seq1: chr18_27006236_27007432
seq2: B6Ng01-227K14.g_67_1249

seq1  GAATTCCTGCTACAGTCTTCTCGTTTTATTTTTAAAAATCCTATGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTACAGTCTTCTCGTTTTATTTTTAAAAATCCTATGATTTA  50

seq1  AATATTAGGATAATAGCAATAACAGAAATTAACCTAGGTATGTTTAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGGATAATAGCAATAACAGAAATTAACCTAGGTATGTTTAATAA  100

seq1  AGCACAACAAGAGCAAAACTAGTTCATTTATAGTAGGATGGGCACCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAACAAGAGCAAAACTAGTTCATTTATAGTAGGATGGGCACCCAAG  150

seq1  AAAGTGACATTTGCATTGAGATCCATGACCATGCCAAAGAATGAGAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGACATTTGCATTGAGATCCATGACCATGCCAAAGAATGAGAATTT  200

seq1  TATGCAGAGGTAGGAGCAGGCAGCAATTCATGAGTTAAGAGGAATATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGAGGTAGGAGCAGGCAGCAATTCATGAGTTAAGAGGAATATAAA  250

seq1  GATCAGAGGGGCAAAACACTGAGGATAGGGCTTTCAGGACTTGTATGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAGGGGCAAAACACTGAGGATAGGGCTTTCAGGACTTGTATGATA  300

seq1  CTTTAAATACATTTTTCATAAGTATCAAATACAAATGAATATTAAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATACATTTTTCATAAGTATCAAATACAAATGAATATTAAGCAGA  350

seq1  GTATCAGTAGAAAATAATATTCAGATCAAGCCTTAATTACAGAAATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGTAGAAAATAATATTCAGATCAAGCCTTAATTACAGAAATTTTC  400

seq1  AAATAATTGTACTTATGTGAATGTCTATTCTTATATGATCATTACATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTGTACTTATGTGAATGTCTATTCTTATATGATCATTACATTTT  450

seq1  TTCAGACTTACAATAGTTAATTATGTATTCAAATCAATCTTGAGGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACTTACAATAGTTAATTATGTATTCAAATCAATCTTGAGGAAAAT  500

seq1  ATTCAGTGTTGTAGCTGAGGCCATGACTCCAGAAACACAGCAGAATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGTTGTAGCTGAGGCCATGACTCCAGAAACACAGCAGAATGGAG  550

seq1  AACTTGGCCTAGTCATTGAAAAGAGAAGGACATTATTTTACTGTGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCCTAGTCATTGAAAAGAGAAGGACATTATTTTACTGTGGTAAA  600

seq1  AATTATTGATTAAAAAATAATTTGATTCTAAAATAAATGCTTTCTGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGATTAAAAAATAATTTGATTCTAAAATAAATGCTTTCTGGGTT  650

seq1  TTTTTTAAGTCCTTATTTTTTAATAATAGACCATCAAGTGCTTACTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGTCCTTATTTTTTAATAATAGACCATCAAGTGCTTACTCCAC  700

seq1  TACTCTCTGAAATAAAGACACCCCAGGTGGTTTCTAAATCACTCTGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTGAAATAAAGACACCCCAGGTGGTTTCTAAATCACTCTGTAGC  750

seq1  TAGTCTTGCTTCTAGCTTTCTGATGGAGCATCATTGCTCAGCTGGTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGCTTCTAGCTTTCTGATGGAGCATCATTGCTCAGCTGGTGAAG  800

seq1  ACTCTTGAGCTTTCAGAGAAAAAGATGGGATGATATTGTGAAAAACTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAGCTTTCAGAGAAAAAGATGGGATGATATTGTGAAAAACTCCT  850

seq1  TCATCATTAGCCTAA-CCAGTTGATGAATGGCTGCTCAAGATTTCAGCTT  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCATCATTAGCCTAACCCAGTTGATGAATGGCTGCTCAAGATTTCAGCTT  900

seq1  CTCTTCCCATTTTCCTCAGAGAAAAGAGAGAATTCATGATGAAAGGCCAA  949
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  CTCTTCCCATTTTCCTCAGAG-AAAGAGAGAATTCATGATGAAAGGCC-A  948

seq1  ATGTTTGTCTGATGGAGTTTTCCAACTTAATAAAAGTACT-AGGGTTAAG  998
      ||| |||||||||||   ||||| |||||||||||||||| |||||||  
seq2  ATG-TTGTCTGATGGGAGTTTCC-ACTTAATAAAAGTACTAAGGGTTAGA  996

seq1  AAACATGGTAATCTTTGCAGAG---AAAGTGACCCCATTGTTGTTGCTTT  1045
      ||||||||||||||||||||||   || |||||||||||||   ||||||
seq2  AAACATGGTAATCTTTGCAGAGAGAAAGGTGACCCCATTGT--GTGCTTT  1044

seq1  TGTGTGTC-TACACTTGGAAAA--TAACATAAGCTTAAAATCTCCATTCT  1092
         ||||| |||||| ||||||   ||||||  ||  |||||| |||  |
seq2  GTGGTGTCTTACACTGGGAAAAATAAACATAGCCT--AAATCT-CATCTT  1091

seq1  TTTGTGTAAATGTACCACATTTTCTCTATCCATTACTTTTTTGAAGGACA  1142
      || |||| ||||||||||| | ||||||||||| ||   |||||||||| 
seq2  TTGGTGT-AATGTACCACA-TATCTCTATCCATAAC---TTTGAAGGAC-  1135

seq1  TCTGGGTTTTTTCCAGCTACCGGCTATTATAAATAAGGCTGCTGTG-AAC  1191
      |||||  |||   |||||||| |||| ||| ||||| ||| ||||| |||
seq2  TCTGGAATTT---CAGCTACC-GCTA-TAT-AATAA-GCT-CTGTGAAAC  1177

seq1  ATAATG  1197
      ||||||
seq2  ATAATG  1183


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