BAC Information

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BAC

Clone NameB6Ng01-227N22
Chromosome18 (Build37)
Map Location 65,994,276 - 65,995,373
singlet/doubletsinglet
Overlap genenone
Upstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c
Downstream geneGrp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227N22.bB6Ng01-227N22.g
ACCGA041426GA041427
length6571,092
definitionB6Ng01-227N22.b B6Ng01-227N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcacaggaaaatactttctgaacaacgcatcattagaaca
ggcactaagatgaacaattaataagtgggacttcataaaactggaaaccc
tgagcatggaaaggacaacatcatttggacaaagtggcaggctgcaaaat
gggaaaagacttttttttcaattacatgtacaatataagagcctaatatg
gatgtctcctgagagactctgccagagccttactgatacaaatgtgggtg
cttacagccaaccttggactgagcacagggaccccaatagaggagtttgg
ggaaggactgaaggagctgaaggggtttgcaaccccataggaagaacaac
aatatcaactaaccagacccttcccccacacacacactcacagctaccag
gaactaaacaaaccgaagagttacacaaggattgacccatggcttcagct
gcatatgtagcagaggatggccttatctggcattaatgagaggggatgcc
ctaggtcctgtgaaagcttaatgccccagcatagtggaatgctagggcag
tgaggcaggagtgggaggattgggtgtgggagcaccctcatagaagcagg
ggggaatagaggttgggatatcaggttcttggagggaaatttggtaaggg
tttatat
gaattcaatggagtgttcatgtggggtgctgaacagtttagatagcttag
ggctgacatttctcataagcatccctatgaacctatcttcataggagatg
aaatcacagtggcagagtcgttgacctgaataccctcagtctgtcagaaa
aggagccactgctcttctggagatcacatctcatgacatcactgcaaagt
ccacaccacacttagcacaccgatggatgtcactgtgaagtccacatcac
ctgccacacctgccacaccaattttagagatcaggccccaacagatttcc
ggtctcgagggaattaagtcatgtggatgatggaaggaactggcagaaaa
aaaatgaattttgagttccacatgccacagggcatgttgtgccaggggtt
gccagatgtgtcaacgtcagagaatccttctggttgccaggaagggtctt
tcaaacctagccaggaaggtgtcctccccgacatcaatccagctgaggac
aggttctgtaagtgacacgtattcctttcttccaaacaatgatgtgctct
gtgtgctaagaacagcacagctctaaaacaagtgaaataggggctggaga
gatggctcagcaagttaagagcactggctgctcttccagaggattctggt
tcagttcccagccaacacatgatggctcacaaccatctgtaatgggatct
gatgccctcttctggtgtgtctgaagatggctacatacattaaatcaatc
aatcaatcaatcaatcattttttgaaaattaaaaccttgcaactcaataa
aacttttccacaatggcatttcaagctgtacagttaccagcagcgcacag
tttcatttgccatctccggcgcctccatccatcatgcctggtctgttggg
gatctccatcgcctgcagggttcctcccatccctccaggtcagccttccc
ttcggctctttgagtacctccctcccttctttacaggagtctttttaggc
ttggcctctggctctggaggaacaaggtccagcagagaacttgctgcaga
tctcttcatggcccatcttcactggcctatagctccttagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65994276_65995373
seq2: B6Ng01-227N22.g_67_1158

seq1  GAATTCAATGGAGTGTTCATGTGGGGTGCTGAACAGTTTAGATAGCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAGTGTTCATGTGGGGTGCTGAACAGTTTAGATAGCTTAG  50

seq1  GGCTGACATTTCTCATAAGCATCCCTATGAACCTATCTTCATAGGAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACATTTCTCATAAGCATCCCTATGAACCTATCTTCATAGGAGATG  100

seq1  AAATCACAGTGGCAGAGTCGTTGACCTGAATACCCTCAGTCTGTCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGTGGCAGAGTCGTTGACCTGAATACCCTCAGTCTGTCAGAAA  150

seq1  AGGAGCCACTGCTCTTCTGGAGATCACATCTCATGACATCACTGCAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCACTGCTCTTCTGGAGATCACATCTCATGACATCACTGCAAAGT  200

seq1  CCACACCACACTTAGCACACCGATGGATGTCACTGTGAAGTCCACATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACACTTAGCACACCGATGGATGTCACTGTGAAGTCCACATCAC  250

seq1  CTGCCACACCTGCCACACCAATTTTAGAGATCAGGCCCCAACAGATTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACACCTGCCACACCAATTTTAGAGATCAGGCCCCAACAGATTTCC  300

seq1  GGTCTCGAGGGAATTAAGTCATGTGGATGATGGAAGGAACTGGCAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGAGGGAATTAAGTCATGTGGATGATGGAAGGAACTGGCAGAAAA  350

seq1  AAAATGAATTTTGAGTTCCACATGCCACAGGGCATGTTGTGCCAGGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTTTGAGTTCCACATGCCACAGGGCATGTTGTGCCAGGGGTT  400

seq1  GCCAGATGTGTCAACGTCAGAGAATCCTTCTGGTTGCCAGGAAGGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGTGTCAACGTCAGAGAATCCTTCTGGTTGCCAGGAAGGGTCTT  450

seq1  TCAAACCTAGCCAGGAAGGTGTCCTCCCCGACATCAATCCAGCTGAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTAGCCAGGAAGGTGTCCTCCCCGACATCAATCCAGCTGAGGAC  500

seq1  AGGTTCTGTAAGTGACACGTATTCCTTTCTTCCAAACAATGATGTGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGTAAGTGACACGTATTCCTTTCTTCCAAACAATGATGTGCTCT  550

seq1  GTGTGCTAAGAACAGCACAGCTCTAAAACAAGTGAAATAGGGGCTGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTAAGAACAGCACAGCTCTAAAACAAGTGAAATAGGGGCTGGAGA  600

seq1  GATGGCTCAGCAAGTTAAGAGCACTGGCTGCTCTTCCAGAGGATTCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGCAAGTTAAGAGCACTGGCTGCTCTTCCAGAGGATTCTGGT  650

seq1  TCAGTTCCCAGCCAACACATGATGGCTCACAACCATCTGTAATGGGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCCAGCCAACACATGATGGCTCACAACCATCTGTAATGGGATCT  700

seq1  GATGCCCTCTTCTGGTGTGTCTGAAGATGGCTACATACATTAAATCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTCTTCTGGTGTGTCTGAAGATGGCTACATACATTAAATCAATC  750

seq1  AATCAATCAATCAATCATTTTTTGAAAATTAAAACCTTGCAACTCAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATCAATCAATCATTTTTTGAAAATTAAAACCTTGCAACTCAATAA  800

seq1  AACTTTTCCACAATGGCATTTCAAGCTGTACAGTTACCAGCAGCGCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCCACAATGGCATTTCAAGCTGTACAGTTACCAGCAGCGCACAG  850

seq1  TTTCATTTGCCATCTCCGGCGCCTCCATCCATCATGCCTGGTCTGTTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTCATTTGCCATCTCCGGCGCCTCCATCCATCATGCCTGGTCTG-TTGG  899

seq1  GGATCTCCATCGCCTGCAGGGTTCCTCCCATCCCTCCAGGTCAGCCTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCCATCGCCTGCAGGGTTCCTCCCATCCCTCCAGGTCAGCCTTCC  949

seq1  CTTCGGCTCTTTGAGTACCCTCCCTCCCTTCTTTACAGGAGTCTTTTTAG  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTCGGCTCTTTGAGTA-CCTCCCTCCCTTCTTTACAGGAGTCTTTTTAG  998

seq1  GCTTGGCCTCTGGCTCTGGAGGAAC-AGGTCCAGCAGAGAACCTTGCTGC  1049
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GCTTGGCCTCTGGCTCTGGAGGAACAAGGTCCAGCAGAGAA-CTTGCTGC  1047

seq1  AGATCTTCTTCATGGCCCATCCTTCACCTTGGCTATAGCTCCTTTAGCT  1098
      ||||| |||||||||||||| ||||| || | |||||||||| ||||||
seq2  AGATC-TCTTCATGGCCCAT-CTTCA-CTGGCCTATAGCTCC-TTAGCT  1092