BAC Information

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BAC

Clone NameB6Ng01-233I24
Chromosome18 (Build37)
Map Location 14,012,380 - 14,187,692
singlet/doubletdoublet
Overlap geneZfp521, LOC100040094
Upstream geneOsbpl1a, LOC435556, Impact, Hrh4, EG383354, LOC665379, LOC100040358
Downstream geneLOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233I24.bB6Ng01-233I24.g
ACCGA045582GA045583
length207898
definitionB6Ng01-233I24.b B6Ng01-233I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,012,380 - 14,012,586)(14,186,807 - 14,187,692)
sequence
catcttccccagccaaattaaacagtgaacagcgcattcgtaagcagttc
acactcagactccacctctcaaatgaggaaaaagctgacacaaaaccagt
tcaagaaaagttaccgtctcacggaaaccaaggcgggtgttgctgaagcc
agacagaaggaagagtcgtttccagtgatgccggtttgaggtggggagga
ggggtga
gaattccaaggctgttttctactgatacttattaaaatttaggtcctatt
acccacctagctcccaacctgccctttatggtgggcaagcgtctccattt
atctgtaaactcaacaggacacagtgccaggggcaaggtctcagtgtctt
tgtctccctgcccctctgtggtaaagcagccaatttccagtacttggtga
acggggacacctgtcatctcatgttgctgagtagattttcaggtgtttat
aagccattttctggagtaataaactgcatgtgccatcagagaacctggga
gggctgaagagactcccaggagcatttgccgtaattcacttttcacctga
ggtccagtgaggtcacatgaattgcccaaggtcaccgagcggtgacagca
ggcaagggcatgccctgcatctctaccttccctgtgcagcactctttcac
cactcagggcaacagttcctcctgacttagcacttttccctctggtaaca
gaaacctgaaagcaaatgtgtaagtgtgctacattatctagcattaaatt
tgcacaatcacagcccgctcaattcaggaaactctgaactttaattcaca
tgagtcataggttttgcagacagaattttggccacagtgaattctgagtt
ctgaggatgagctaagcacatagacatgtttcaagacctccttttctaaa
aagaattcagggagtgatgagcaagtcctctttgaccctgtacattccag
tctgggctcagtgtctggcccactcagtgaagacctctgggagtttaatt
gctgtgtcacttacaggacttgattgatcttaggtccccaaaaccattga
cagtggtacaggcctgtggtttcaagtatggagccctttgtgattcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14012380_14012586
seq2: B6Ng01-233I24.b_48_254

seq1  CATCTTCCCCAGCCAAATTAAACAGTGAACAGCGCATTCGTAAGCAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCCCAGCCAAATTAAACAGTGAACAGCGCATTCGTAAGCAGTTC  50

seq1  ACACTCAGACTCCACCTCTCAAATGAGGAAAAAGCTGACACAAAACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGACTCCACCTCTCAAATGAGGAAAAAGCTGACACAAAACCAGT  100

seq1  TCAAGAAAAGTTACCGTCTCACGGAAACCAAGGCGGGTGTTGCTGAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAAGTTACCGTCTCACGGAAACCAAGGCGGGTGTTGCTGAAGCC  150

seq1  AGACAGAAGGAAGAGTCGTTTCCAGTGATGCCGGTTTGAGGTGGGGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAGGAAGAGTCGTTTCCAGTGATGCCGGTTTGAGGTGGGGAGGA  200

seq1  GGGGTGA  207
      |||||||
seq2  GGGGTGA  207

seq1: chr18_14186807_14187692
seq2: B6Ng01-233I24.g_71_968 (reverse)

seq1  AGGAATCACAAA-GGCTCCA-ACTGGAACCCA---GGCTGTACCACTGTC  45
      |||||||||||| ||||||| ||| ||| |||   | |||||||||||||
seq2  AGGAATCACAAAGGGCTCCATACTTGAAACCACAGGCCTGTACCACTGTC  50

seq1  AATGG-TTTGTGGACCTAAGATC-ATC-AGTCCTGTAAGTGACACAGCAA  92
      ||||| |||| |||||||||||| ||| ||||||||||||||||||||||
seq2  AATGGTTTTGGGGACCTAAGATCAATCAAGTCCTGTAAGTGACACAGCAA  100

seq1  -TAAACT-CCAGAGGTCTTCACTGAGT-GGCCAGACACTGAG-CCAGACT  138
       |||||| ||||||||||||||||||| |||||||||||||| |||||||
seq2  TTAAACTCCCAGAGGTCTTCACTGAGTGGGCCAGACACTGAGCCCAGACT  150

seq1  GGAATGTACAGGGTCAAAGAGGACTTGCTCATCACTCCCTGAATTCTTTT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTACAGGGTCAAAGAGGACTTGCTCATCACTCCCTGAATTCTTTT  200

seq1  TAGAAAAGGAGGTCTTGAAACATGTCTATGTGCTTAGCTCATCCTCAGAA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGGAGGTCTTGAAACATGTCTATGTGCTTAGCTCATCCTCAGAA  250

seq1  CTCAGAATTCACTGTGGCCAAAATTCTGTCTGCAAAACCTATGACTCATG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATTCACTGTGGCCAAAATTCTGTCTGCAAAACCTATGACTCATG  300

seq1  TGAATTAAAGTTCAGAGTTTCCTGAATTGAGCGGGCTGTGATTGTGCAAA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAAAGTTCAGAGTTTCCTGAATTGAGCGGGCTGTGATTGTGCAAA  350

seq1  TTTAATGCTAGATAATGTAGCACACTTACACATTTGCTTTCAGGTTTCTG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTAGATAATGTAGCACACTTACACATTTGCTTTCAGGTTTCTG  400

seq1  TTACCAGAGGGAAAAGTGCTAAGTCAGGAGGAACTGTTGCCCTGAGTGGT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGAGGGAAAAGTGCTAAGTCAGGAGGAACTGTTGCCCTGAGTGGT  450

seq1  GAAAGAGTGCTGCACAGGGAAGGTAGAGATGCAGGGCATGCCCTTGCCTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTGCTGCACAGGGAAGGTAGAGATGCAGGGCATGCCCTTGCCTG  500

seq1  CTGTCACCGCTCGGTGACCTTGGGCAATTCATGTGACCTCACTGGACCTC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACCGCTCGGTGACCTTGGGCAATTCATGTGACCTCACTGGACCTC  550

seq1  AGGTGAAAAGTGAATTACGGCAAATGCTCCTGGGAGTCTCTTCAGCCCTC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAAAGTGAATTACGGCAAATGCTCCTGGGAGTCTCTTCAGCCCTC  600

seq1  CCAGGTTCTCTGATGGCACATGCAGTTTATTACTCCAGAAAATGGCTTAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCTCTGATGGCACATGCAGTTTATTACTCCAGAAAATGGCTTAT  650

seq1  AAACACCTGAAAATCTACTCAGCAACATGAGATGACAGGTGTCCCCGTTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTGAAAATCTACTCAGCAACATGAGATGACAGGTGTCCCCGTTC  700

seq1  ACCAAGTACTGGAAATTGGCTGCTTTACCACAGAGGGGCAGGGAGACAAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTACTGGAAATTGGCTGCTTTACCACAGAGGGGCAGGGAGACAAA  750

seq1  GACACTGAGACCTTGCCCCTGGCACTGTGTCCTGTTGAGTTTACAGATAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGACCTTGCCCCTGGCACTGTGTCCTGTTGAGTTTACAGATAA  800

seq1  ATGGAGACGCTTGCCCACCATAAAGGGCAGGTTGGGAGCTAGGTGGGTAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACGCTTGCCCACCATAAAGGGCAGGTTGGGAGCTAGGTGGGTAA  850

seq1  TAGGACCTAAATTTTAATAAGTATCAGTAGAAAACAGCCTTGGAATTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCTAAATTTTAATAAGTATCAGTAGAAAACAGCCTTGGAATTC  898