BAC Information

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BAC

Clone NameB6Ng01-237B08
Chromosome18 (Build37)
Map Location 85,951,453 - 85,952,589
singlet/doubletsinglet
Overlap genenone
Upstream geneCyb5, Fbxo15, 1700034H14Rik, LOC100039765, LOC665382
Downstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237B08.bB6Ng01-237B08.g
ACCGA048139GA048140
length1,0011,118
definitionB6Ng01-237B08.b B6Ng01-237B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgaaatctacattaatatttataccactataatataaagaa
acagctgttaggtaggaaggaaaatatttagcacaaccactatactgagg
atatagaaatcggtacatggaaatctatttcttttcttttttttcttttg
tattttcctcatggacattttcaaagctatcccaaaagttcccccttacc
ctcccacccacctaccccaactttttggccctggcgttcccctgtactgg
cgtatataaagtttgcaagtccaatgggactctctttccagtgatggccg
actaggccatcatttgatacatatgcagctagagtcaagagctcaggggt
actggttagttgataatgttgttccacctatagggttgcagatcccttta
gctccttgggtactttctcaagctcctccgttgggggccctgtgatccat
ccaatagctgactgtgagcatctacttctgtgtttcctaggccccggcaa
agtctcacaagagacagctatatctgggtcttttcagcaagatcttgcta
gtgtatgcaaaggtgtcagcatttggaagctgattatgggatggatccct
ggatatggcagtctctagatggtccatcatttcgtcacagctccaaactt
tgtctctgtaactctttccatgggtgttttgttcccaattctaagaaggg
gcacagtatccacacattggtcttcgttcttcttgagtttcatgcgttta
gcaaattgtatcttaaatctttttttttaattaggtattttcctcgttta
cattttctatgctatcccaaaggtcccccatacccacccccccaaccccc
taaccacccactccccctttttggccctggcgttcccatgtactggggca
tataaagtttgcagtccaatgtgcctctctttgcagtgatggccgactag
tcatcttttgatacatatgcagctaaagacaagagctccgggtactggtt
a
gaattcaaactactgacctagaagtgaagggattcatttttctttatatc
agactttcaaaatatcaattccttgatacattcagaaaataatctgacct
aaatccattttgtactatctttggttttatataacacacatacagatgca
cacacacacacacacacacacacacacacacacacaaacagggtcagggg
tactcacatgcaaatcacatttgagttctatgattccaaatataatccag
atataccactctaaaaatttatatttgaaggaatatgttggtgtcacata
aaaatattcgcacacctgttttgtatctttgtgaaattacaatataattg
gaccatttcccccttgcctttctctttccaacctctcttttatatacctc
ttaacactctttcaaactcatggcctctattttcaaaatgattgaaacat
atgtgtatatgcacagatattcttaaatacaacctgcttggtctgtatac
tgttaattgtgcttgtgttttcagggttgaacacttggtattggaaaacc
tattgttgttcttatctgtggggaagactatttcttcctttcagcatccc
ttagatgcctatcgttatttgtgtagagttaaaactttataagcgttccc
atctattttagcatgtctatgattgtctatgttcagttcatatttagtca
atcatgttgatgaaactttacagatataacttctgacattactagaagac
agactctcatagcaaaattccctatgcttggactgtcacagtctttctat
gcctcctttcctcagtaatcccttacctgtggatttttagatttatctat
tagtactgagctctgcattctcattggctgcggttctttccgcttgttgc
aagacattctccttgatgaggtgttgtgacattgttcacagtagtcagat
atggaaccagcagagatgactactattatggcaaaagtgcattttcatag
tttttttttgtattatttacattcgaccagatattgcagtttctttcata
gcttgcctgaacttatgtttgtcttgttgatagctgtttctgaatagaat
aagtgcaaatttaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85951453_85952589
seq2: B6Ng01-237B08.g_63_1180

seq1  GAATTCAAACTACTGACCTAGAAGTGAAGGGATTCATTTTTCTTTATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTACTGACCTAGAAGTGAAGGGATTCATTTTTCTTTATATC  50

seq1  AGACTTTCAAAATATCAATTCCTTGATACATTCAGAAAATAATCTGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCAAAATATCAATTCCTTGATACATTCAGAAAATAATCTGACCT  100

seq1  AAATCCATTTTGTACTATCTTTGGTTTTATATAACACACATACAGATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATTTTGTACTATCTTTGGTTTTATATAACACACATACAGATGCA  150

seq1  CACACACACACACACACACACACACACACACACACAAACAGGGTCAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAAACAGGGTCAGGGG  200

seq1  TACTCACATGCAAATCACATTTGAGTTCTATGATTCCAAATATAATCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACATGCAAATCACATTTGAGTTCTATGATTCCAAATATAATCCAG  250

seq1  ATATACCACTCTAAAAATTTATATTTGAAGGAATATGTTGGTGTCACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCACTCTAAAAATTTATATTTGAAGGAATATGTTGGTGTCACATA  300

seq1  AAAATATTCGCACACCTGTTTTGTATCTTTGTGAAATTACAATATAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCGCACACCTGTTTTGTATCTTTGTGAAATTACAATATAATTG  350

seq1  GACCATTTCCCCCTTGCCTTTCTCTTTCCAACCTCTCTTTTATATACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTCCCCCTTGCCTTTCTCTTTCCAACCTCTCTTTTATATACCTC  400

seq1  TTAACACTCTTTCAAACTCATGGCCTCTATTTTCAAAATGATTGAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTCTTTCAAACTCATGGCCTCTATTTTCAAAATGATTGAAACAT  450

seq1  ATGTGTATATGCACAGATATTCTTAAATACAACCTGCTTGGTCTGTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATATGCACAGATATTCTTAAATACAACCTGCTTGGTCTGTATAC  500

seq1  TGTTAATTGTGCTTGTGTTTTCAGGGTTGAACACTTGGTATTGGAAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTGTGCTTGTGTTTTCAGGGTTGAACACTTGGTATTGGAAAACC  550

seq1  TATTGTTGTTCTTATCTGTGGGGAAGACTATTTCTTCCTTTCAGCATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTGTTCTTATCTGTGGGGAAGACTATTTCTTCCTTTCAGCATCCC  600

seq1  TTAGATGCCTATCGTTATTTGTGTAGAGTTAAAACTTTATAAGCGTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGCCTATCGTTATTTGTGTAGAGTTAAAACTTTATAAGCGTTCCC  650

seq1  ATCTATTTTAGCATGTCTATGATTGTCTATGTTCAGTTCATATTTAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTAGCATGTCTATGATTGTCTATGTTCAGTTCATATTTAGTCA  700

seq1  ATCATGTTGATGAAACTTTACAGATATAACTTCTGACATTACTAGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTGATGAAACTTTACAGATATAACTTCTGACATTACTAGAAGAC  750

seq1  AGACTCTCATAGCAAAATTCCCTATGCTTGGACTGTCACAGTCTTTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTCATAGCAAAATTCCCTATGCTTGGACTGTCACAGTCTTTCTAT  800

seq1  GCCTCCTTTCCTCAGTAATCCCTTACCTGTGGATTTTTAGATTTATCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTTCCTCAGTAATCCCTTACCTGTGGATTTTTAGATTTATCTAT  850

seq1  TAGTACTGAGCTCTGCATTCTCATTGGCTGCGGTTCTTTCCGCTTGTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGAGCTCTGCATTCTCATTGGCTGCGGTTCTTTCCGCTTGTTGC  900

seq1  AAAGACAATTCTCCTTGATGAGGGTGTTGTGACATTGTTCACAGTAGTCA  950
       ||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  -AAGAC-ATTCTCCTTGATGA-GGTGTTGTGACATTGTTCACAGTAGTCA  947

seq1  GGATATGGAACCAGCAGAGATGACTACTATTAATGGCAAAAAGTGGCATT  1000
       |||||||||||||||||||||||||||||| ||||| |||||| |||||
seq2  -GATATGGAACCAGCAGAGATGACTACTATT-ATGGC-AAAAGT-GCATT  993

seq1  TTCATAG-TTTTTTTTGTATTAATTTACAATTCGACCAAGATAATTGCAG  1049
      ||||||| ||||||||||||| |||||| |||||||| |||| |||||||
seq2  TTCATAGTTTTTTTTTGTATT-ATTTAC-ATTCGACC-AGAT-ATTGCAG  1039

seq1  TTTCTTTCATTAAGCTTGCCTGAAACTTAATTGTTTTTGGTCTTGTTGAT  1099
      ||||||||||  |||||||||| ||||||  |||||   |||||||||||
seq2  TTTCTTTCAT--AGCTTGCCTG-AACTTA--TGTTT---GTCTTGTTGAT  1081

seq1  AGCTG-TTCTGATTAGAATAAAGTGGAATATTTAATACA  1137
      ||||| |||||| |||||| ||||| || ||||||||||
seq2  AGCTGTTTCTGAATAGAAT-AAGTGCAA-ATTTAATACA  1118