BAC Information

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BAC

Clone NameB6Ng01-248D09
Chromosome18 (Build37)
Map Location 58,274,609 - 58,387,757
singlet/doubletdoublet
Overlap geneFbn2
Upstream geneMegf10, LOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik
Downstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248D09.bB6Ng01-248D09.g
ACCGA056344GA056345
length1,1681,081
definitionB6Ng01-248D09.b B6Ng01-248D09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,386,587 - 58,387,757)(58,274,609 - 58,275,697)
sequence
gaattccttgtggttcctgtaatggtctcagacagagccaattaataaca
ctaaagccttgccctcaaaggcagaaaataacagggatgtagaaactagt
tatctccacttaggccaaatttctctacggatttcttcacgtccattact
tagaatatgatctaattataaaataaaaaaggattctcaattgttagcca
aagaaatgataactatcccaatcagaaggaaattctctgagaaggaagtg
agactactataatgaaaattacaaagcaaggttcaaaaagcacatgtgta
agatggccatgcttaaaggataggacttgtcactactagaagctgtgtgc
ctgtactcttgatttatccctgatccttcaatattatatgtcttccagtt
cagtgtccaggcagcaatagctaatagcagaagtgaagcattagtgggga
aggcttcaccattttcccctcatatttgaggctgtagaaccaagttccac
tgacagtgcacagtgaagatccctagaaaagaaactggagagaaagccaa
aaagctgagcaaaccaaaatgaacctgacttcgtactctggcctgcggtt
ctgatgtctagtgtaacctgcaattctctgggtaaactctcggggctgga
tttctatttcttttgccagcctctcctcagcttttaaagtgctatgtttt
ctatcagccagggtgctgttgaggcaagatgccagtctgattgacacgag
ctggctagggcactgcctctcctttttcctttctttctagaaaatgtgat
gagcttggatttcctagtaactcattcttgatacactgtccttttgtatt
ctcttgaaacttggcactgctactcctacttcctgacccccgcttactta
tttaacaactatcatttttgaaattgggtcagtcaaaatgtcttcgatgg
aagctcaaggtctcacccaaacctggagtagttatggaaagcgctccgaa
gggcttgttcagagcagagtcacttgagaatacggatccagaaaacatgc
agtgattagtctttcccgcaagagtttccttctatgccttctggagaatg
tccttagttagcacccaggttctgaaccggctgacttcatctcagtcctt
tcttagcgccgcctctcg
gaattctcatcagtattatgtctaactgaatattatgtctgttttattca
tttttcaggagttagatattaatatatgtgcagaataatgttttaaaatg
aattttggtagtcgaatgcattcaggtagcctgtaaattctttatttagt
tgtatgagtattgaaactaaataaaaagaagcaactaccatattttatta
attattcatggaattaggatagcatattagagatccatcttggtagtata
ttatggcttcatgattttgagagaacaaagactgtatctcaatttttccc
ataataaagataacaaaaatatttgttttggaaactctaatcaaacttta
ctatttatgctatctacagcaagaggaacttctcattcatcctaagggga
ttttcccagtacaaacttatttataatgcacaggatatgagagggattaa
ttctcaaggtcgtgagaaaggaaagaaaacattgtaaaggcctggtgcac
tataagctgccggctatccaaaataaccatctgacctgcttccaaggaga
agggcaaagtgcatcacggtcattgactttttcaactctgttggtgccaa
ggagacagtagcctgccactcaccggaacctctgacaggacaggcctccg
gaatggtcccgatgctccagcaacggccgggctcacaacaacattgagct
tttgccattcggcccgggagttcttgggcacaacggccattcaccaggcc
ggagaagcatgttccagccctctgatctgaagatgtaaaggacaaacagg
agacacagcagaattacctccaggtcttgcagcaatcatttcccatgtta
ggcaatagaggcgaggtgatttcctctgacttaatcatttttataccagt
tcattcctttggctcttaattcttacacatctgatcagcgctcttactcc
tttttgtcagcaaagttcctatgattagtgactcctaagtcaaagtgaga
ggcatgtaaatccgagcaagcttccttgacaaacaaatagtctggagctc
aagaaatagtgccacgaacacgtgcgcttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58386587_58387757
seq2: B6Ng01-248D09.b_46_1213 (reverse)

seq1  CGAGAAGCGGCGCTAAAGAAAAGGACCTGAGATTGAAAGGTCAG-CGGGT  49
      ||||| ||||||||||   |||||| |||||| ||||  ||||| ||| |
seq2  CGAGAGGCGGCGCTAA--GAAAGGA-CTGAGA-TGAA--GTCAGCCGGTT  44

seq1  CAGAA-CTGGGTGCCTACT-AGGACA-TCT-CAGAAGCATTAGAAGGAAA  95
      ||||| ||||||||  ||| |||||| ||| ||||||   ||||||||||
seq2  CAGAACCTGGGTGCTAACTAAGGACATTCTCCAGAAGGCATAGAAGGAAA  94

seq1  ACTTCTTGCGGGAAAGACTAATCACTGCATGTTTTTCTGGATCCGTATCT  145
         |||||||||||||||||||||||||||| ||||||||||||||||  
seq2  --CTCTTGCGGGAAAGACTAATCACTGCATG-TTTTCTGGATCCGTATTC  141

seq1  TCAAGTGACTCTGCTCTGAAC-AGCCCTTCGGAGCGCTTT-CATAACTAC  193
      ||||||||||||||||||||| |||||||||||||||||| |||||||||
seq2  TCAAGTGACTCTGCTCTGAACAAGCCCTTCGGAGCGCTTTCCATAACTAC  191

seq1  TTCCAGGTTTGGGTGAGACCTTGAGCTTCCATCGAAGACATTTTGACTGA  243
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCCAGGTTTGGGTGAGACCTTGAGCTTCCATCGAAGACATTTTGACTGA  240

seq1  CCCAATTTCAAAAATGATAGTTGTTAAATAAGTAAGCGGGGGTCAGGAAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTTCAAAAATGATAGTTGTTAAATAAGTAAGCGGGGGTCAGGAAG  290

seq1  TAGGAGTAGCAGTGCCAAGTTTCAAGAGAATACAAAAGGACAGTGTATCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTAGCAGTGCCAAGTTTCAAGAGAATACAAAAGGACAGTGTATCA  340

seq1  AGAATGAGTTACTAGGAAATCCAAGCTCATCACATTTTCTAGAAAGAAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGTTACTAGGAAATCCAAGCTCATCACATTTTCTAGAAAGAAAG  390

seq1  GAAAAAGGAGAGGCAGTGCCCTAGCCAGCTCGTGTCAATCAGACTGGCAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGAGAGGCAGTGCCCTAGCCAGCTCGTGTCAATCAGACTGGCAT  440

seq1  CTTGCCTCAACAGCACCCTGGCTGATAGAAAACATAGCACTTTAAAAGCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCAACAGCACCCTGGCTGATAGAAAACATAGCACTTTAAAAGCT  490

seq1  GAGGAGAGGCTGGCAAAAGAAATAGAAATCCAGCCCCGAGAGTTTACCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGGCTGGCAAAAGAAATAGAAATCCAGCCCCGAGAGTTTACCCA  540

seq1  GAGAATTGCAGGTTACACTAGACATCAGAACCGCAGGCCAGAGTACGAAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGCAGGTTACACTAGACATCAGAACCGCAGGCCAGAGTACGAAG  590

seq1  TCAGGTTCATTTTGGTTTGCTCAGCTTTTTGGCTTTCTCTCCAGTTTCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTCATTTTGGTTTGCTCAGCTTTTTGGCTTTCTCTCCAGTTTCTT  640

seq1  TTCTAGGGATCTTCACTGTGCACTGTCAGTGGAACTTGGTTCTACAGCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGATCTTCACTGTGCACTGTCAGTGGAACTTGGTTCTACAGCCT  690

seq1  CAAATATGAGGGGAAAATGGTGAAGCCTTCCCCACTAATGCTTCACTTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGAGGGGAAAATGGTGAAGCCTTCCCCACTAATGCTTCACTTCT  740

seq1  GCTATTAGCTATTGCTGCCTGGACACTGAACTGGAAGACATATAATATTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAGCTATTGCTGCCTGGACACTGAACTGGAAGACATATAATATTG  790

seq1  AAGGATCAGGGATAAATCAAGAGTACAGGCACACAGCTTCTAGTAGTGAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCAGGGATAAATCAAGAGTACAGGCACACAGCTTCTAGTAGTGAC  840

seq1  AAGTCCTATCCTTTAAGCATGGCCATCTTACACATGTGCTTTTTGAACCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTATCCTTTAAGCATGGCCATCTTACACATGTGCTTTTTGAACCT  890

seq1  TGCTTTGTAATTTTCATTATAGTAGTCTCACTTCCTTCTCAGAGAATTTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTAATTTTCATTATAGTAGTCTCACTTCCTTCTCAGAGAATTTC  940

seq1  CTTCTGATTGGGATAGTTATCATTTCTTTGGCTAACAATTGAGAATCCTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTGGGATAGTTATCATTTCTTTGGCTAACAATTGAGAATCCTT  990

seq1  TTTTATTTTATAATTAGATCATATTCTAAGTAATGGACGTGAAGAAATCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATAATTAGATCATATTCTAAGTAATGGACGTGAAGAAATCC  1040

seq1  GTAGAGAAATTTGGCCTAAGTGGAGATAACTAGTTTCTACATCCCTGTTA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAAATTTGGCCTAAGTGGAGATAACTAGTTTCTACATCCCTGTTA  1090

seq1  TTTTCTGCCTTTGAGGGCAAGGCTTTAGTGTTATTAATTGGCTCTGTCTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCCTTTGAGGGCAAGGCTTTAGTGTTATTAATTGGCTCTGTCTG  1140

seq1  AGACCATTACAGGAACCACAAGGAATTC  1171
      ||||||||||||||||||||||||||||
seq2  AGACCATTACAGGAACCACAAGGAATTC  1168

seq1: chr18_58274609_58275697
seq2: B6Ng01-248D09.g_62_1142

seq1  GAATTCTCATCAGTATTATGTCTAACTGAATATTATGTCTGTTTTATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCAGTATTATGTCTAACTGAATATTATGTCTGTTTTATTCA  50

seq1  TTTTTCAGGAGTTAGATATTAATATATGTGCAGAATAATGTTTTAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGAGTTAGATATTAATATATGTGCAGAATAATGTTTTAAAATG  100

seq1  AATTTTGGTAGTCGAATGCATTCAGGTAGCCTGTAAATTCTTTATTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGTAGTCGAATGCATTCAGGTAGCCTGTAAATTCTTTATTTAGT  150

seq1  TGTATGAGTATTGAAACTAAATAAAAAGAAGCAACTACCATATTTTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAGTATTGAAACTAAATAAAAAGAAGCAACTACCATATTTTATTA  200

seq1  ATTATTCATGGAATTAGGATAGCATATTAGAGATCCATCTTGGTAGTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATGGAATTAGGATAGCATATTAGAGATCCATCTTGGTAGTATA  250

seq1  TTATGGCTTCATGATTTTGAGAGAACAAAGACTGTATCTCAATTTTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTTCATGATTTTGAGAGAACAAAGACTGTATCTCAATTTTTCCC  300

seq1  ATAATAAAGATAACAAAAATATTTGTTTTGGAAACTCTAATCAAACTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAGATAACAAAAATATTTGTTTTGGAAACTCTAATCAAACTTTA  350

seq1  CTATTTATGCTATCTACAGCAAGAGGAACTTCTCATTCATCCTAAGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATGCTATCTACAGCAAGAGGAACTTCTCATTCATCCTAAGGGGA  400

seq1  TTTTCCCAGTACAAACTTATTTATAATGCACAGGATATGAGAGGGATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAGTACAAACTTATTTATAATGCACAGGATATGAGAGGGATTAA  450

seq1  TTCTCAAGGTCGTGAGAAAGGAAAGAAAACATTGTAAAGGCCTGGTGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGTCGTGAGAAAGGAAAGAAAACATTGTAAAGGCCTGGTGCAC  500

seq1  TATAAGCTGCCGGCTATCCAAAATAACCATCTGACCTGCTTCCAAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTGCCGGCTATCCAAAATAACCATCTGACCTGCTTCCAAGGAGA  550

seq1  AGGGCAAAGTGCATCACGGTCATTGACTTTTTCAACTCTGTTGGTGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAAGTGCATCACGGTCATTGACTTTTTCAACTCTGTTGGTGCCAA  600

seq1  GGAGACAGTAGCCTGCCACTCACCGGAACCTCTGACAGGACAGGCCTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGTAGCCTGCCACTCACCGGAACCTCTGACAGGACAGGCCTCCG  650

seq1  GAATGGTCCCGATGCTCCAGCAACGGCCGGGCTCACAACAACATTGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTCCCGATGCTCCAGCAACGGCCGGGCTCACAACAACATTGAGCT  700

seq1  TTTGCCATTCGGCCCGGGAGTTCTTGGGCACAACGGCCATTCACCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATTCGGCCCGGGAGTTCTTGGGCACAACGGCCATTCACCAGGCC  750

seq1  GGAGAAGCATGTTCCAGCCCTCTGATCTGAAGATGTAAAGGACAAACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCATGTTCCAGCCCTCTGATCTGAAGATGTAAAGGACAAACAGG  800

seq1  AGACACAGCAGAATTACCTCCAGGTCTTGCAGCAATCATTTCCCATGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGCAGAATTACCTCCAGGTCTTGCAGCAATCATTTCCCATGTTA  850

seq1  GGCAAATAGAGGCGAGGTGAATTCCTCTGACTTAATCATTTTTTATACCA  900
      ||| |||||||||||||||| ||||||||||||||||| |||||||||||
seq2  GGC-AATAGAGGCGAGGTGATTTCCTCTGACTTAATCA-TTTTTATACCA  898

seq1  GTTCATTCCTTTGCCTCTTAATTCTTACACATCTGATCAGCGCTC-TACT  949
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  GTTCATTCCTTTGGCTCTTAATTCTTACACATCTGATCAGCGCTCTTACT  948

seq1  CCTTTTTGTCAGCAAAGGTTCCTATGATTAGTGACT-CTAAGTCAAAAGT  998
      |||||||||||||||| ||||||||||||||||||| ||||||| |||||
seq2  CCTTTTTGTCAGCAAA-GTTCCTATGATTAGTGACTCCTAAGTC-AAAGT  996

seq1  GAGAGGCATGTAAATCCGAGGCAAGCTTCCCTTGACAAACCAAATAGGTC  1048
      ||||||||||||||||||| |||||||| |||||||||| |||||| |||
seq2  GAGAGGCATGTAAATCCGA-GCAAGCTT-CCTTGACAAA-CAAATA-GTC  1042

seq1  TGGAGCTCAAGAAATAGTGGCAACCGAACACGTGCGCTTGA  1089
      ||||||||||||||||||| ||  |||||||||||||||||
seq2  TGGAGCTCAAGAAATAGTGCCA--CGAACACGTGCGCTTGA  1081