BAC Information

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BAC

Clone NameB6Ng01-248E14
Chromosome18 (Build37)
Map Location 65,033,533 - 65,034,361
singlet/doubletsinglet
Overlap genenone
Upstream geneWdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
Downstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248E14.bB6Ng01-248E14.g
ACCGA056402GA056403
length8291,210
definitionB6Ng01-248E14.b B6Ng01-248E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaacaaaatggatgagatccaagatgtttgcaccccaccccca
ccccactgtgtggtggtgaatgtatgcaccgattagcacttttaagattt
ttctgtatcagtattcagtgtcgtgaatttaattaatatgggagattata
tgataattggcttctgtgtatttccattacactaactcaattttgagaaa
catgatgctatacgacatataataaaatggcctcctgaggaagcaggtgg
gcacatccagccctcatgtagttctcagcgactgtgtttttgtgagcatt
tcctactctctctaccattcactgctttctgttgtgtgacctctgtctct
ctccatcagatgtaaaatctggactagaaagatagaataaaaccatcgct
actggctggctggcattttgtttcctaccaagcagccctgccctggttcc
ctggtgtggcctcaccggaactcccttgagtggctgtaatggaggccaga
ttggaaggagtggatgttgcttaccagaaagagctaatgaccttggaagc
actttgggattcacagagatgtttccagccagctttgtacaaacacacac
acacacacacacacacacacacacacacacacacacacacacactggcca
gcatcttccagtcttagcatatccaagaaaggctgtgggtggctcagtgt
actggggttctctgcagacttcccacatgttctagcacagacttgtaagg
ccagtagctgctggcacctgtttttacagaagccatttctctctctctct
ctctctctctctctctctctctctctctc
gaattcagcatagtgttggcataaaatagacaagttgaacaatggaactg
aagatccaggtgtaagttcacatatcgatggacagcacatctcacacaca
cagacacagatacacacacacatacacacacttatatgcaaatataagtg
tgaatatatatatgcacatatatacatatacacatgtgcatatatatata
tgaatatatatgccagaaaattcacatttttcattggttattttatttat
ttacatttcaaattttatcccccttcccagtttccccttcacaaccctcc
tatctcctccccctgcgtctatgaaggtgctccctcacccacccacccat
tcctgcatcagcaccctagcattcccctaccctgagtcatcgagtctcca
caggaccgaggggttcccctcctagtgatgcccgatgaaaggcagcatct
tcaacaaagggtacctgtttaaactggatgactgcatgtagaagaatgca
aatagacaggtacttatcacccggcacaaactgaacttcaagtggatcaa
agacctcaacaaaaggcgacacactgaatctgatagaggggcttcagtat
ggcaaaggaaaccatcattcagacaaagggggaggctacagaatggaaaa
gatttttatcaactacacattcaatagagggctaatatctaggacataca
aataagttaaaaaactgtacaccaagaaaaataacccccttaaaagtgga
gtagacaggcaaagcttccagtggaggcactgggataccaccacaatcac
aaccctttgacctacaatttatcctgcttgcaagatgtgctgagttaagg
gtgtcacagaacttgtgggagtggccaaccaatgactgggcccaacttga
gacccatggcaataagttgggagccccagaccactacatggaatgggcca
ggaaaccagagaactggatagccagaagatctaggaataaaaaccaaaca
tgacagggcggggaaggaagaagccagagaagccttccatccaggcaact
gatgagagcagatgaaagagaacccacagccaaacattagattggagcct
cagcccacaaaatctaactaacaggctcaatggcattcatagagactgac
tgacattcaagaagctatttcctgttaaaccttagggccctttctggcca
tagatatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65033533_65034361
seq2: B6Ng01-248E14.b_46_874 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGCTT  50

seq1  CTGTAAAAACAGGTGCCAGCAGCTACTGGCCTTACAAGTCTGTGCTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAAACAGGTGCCAGCAGCTACTGGCCTTACAAGTCTGTGCTAGAA  100

seq1  CATGTGGGAAGTCTGCAGAGAACCCCAGTACACTGAGCCACCCACAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGAAGTCTGCAGAGAACCCCAGTACACTGAGCCACCCACAGCCT  150

seq1  TTCTTGGATATGCTAAGACTGGAAGATGCTGGCCAGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGATATGCTAAGACTGGAAGATGCTGGCCAGTGTGTGTGTGTGTG  200

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTACAAAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTACAAAGCTG  250

seq1  GCTGGAAACATCTCTGTGAATCCCAAAGTGCTTCCAAGGTCATTAGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTGGAAACATCTCTGTGAATCCCAAAGTGCTTCCAAGGTCATTAGCTCT  300

seq1  TTCTGGTAAGCAACATCCACTCCTTCCAATCTGGCCTCCATTACAGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAAGCAACATCCACTCCTTCCAATCTGGCCTCCATTACAGCCAC  350

seq1  TCAAGGGAGTTCCGGTGAGGCCACACCAGGGAACCAGGGCAGGGCTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAGTTCCGGTGAGGCCACACCAGGGAACCAGGGCAGGGCTGCTT  400

seq1  GGTAGGAAACAAAATGCCAGCCAGCCAGTAGCGATGGTTTTATTCTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAAACAAAATGCCAGCCAGCCAGTAGCGATGGTTTTATTCTATCT  450

seq1  TTCTAGTCCAGATTTTACATCTGATGGAGAGAGACAGAGGTCACACAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCCAGATTTTACATCTGATGGAGAGAGACAGAGGTCACACAACA  500

seq1  GAAAGCAGTGAATGGTAGAGAGAGTAGGAAATGCTCACAAAAACACAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGTGAATGGTAGAGAGAGTAGGAAATGCTCACAAAAACACAGTC  550

seq1  GCTGAGAACTACATGAGGGCTGGATGTGCCCACCTGCTTCCTCAGGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAACTACATGAGGGCTGGATGTGCCCACCTGCTTCCTCAGGAGGC  600

seq1  CATTTTATTATATGTCGTATAGCATCATGTTTCTCAAAATTGAGTTAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTATATGTCGTATAGCATCATGTTTCTCAAAATTGAGTTAGTG  650

seq1  TAATGGAAATACACAGAAGCCAATTATCATATAATCTCCCATATTAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAAATACACAGAAGCCAATTATCATATAATCTCCCATATTAATTA  700

seq1  AATTCACGACACTGAATACTGATACAGAAAAATCTTAAAAGTGCTAATCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACGACACTGAATACTGATACAGAAAAATCTTAAAAGTGCTAATCG  750

seq1  GTGCATACATTCACCACCACACAGTGGGGTGGGGGTGGGGTGCAAACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATACATTCACCACCACACAGTGGGGTGGGGGTGGGGTGCAAACATC  800

seq1  TTGGATCTCATCCATTTTGTTTGGAATTC  829
      |||||||||||||||||||||||||||||
seq2  TTGGATCTCATCCATTTTGTTTGGAATTC  829