BAC Information

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BAC

Clone NameB6Ng01-250M16
Chromosome14 (Build37)18 (Build37)
Map Location 86,220,681 - 86,221,25970,257,779 - 70,258,964
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250M16.bB6Ng01-250M16.g
ACCGA058238GA058239
length7981,165
definitionB6Ng01-250M16.b B6Ng01-250M16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,220,681 - 86,221,259)(70,257,779 - 70,258,964)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgtttctccgtgtctaaggagatgatcatgtggcttttgtctttg
agtttgtttatataatggattacgttgatgtatttctatatattaaacca
tccctgcatcaatggaataaaacctacttggtcaggatggatgattgctt
taatgtgttattggattcggttatcgagaattttattgagtatttttgca
tatatattcataagggaaattggtctgaagttgtctatctttgttggatc
tttctctggcttaggtatcagagtaattgtggcttcatagaatgagttgg
gtagagtaccttctacttctattttgtggaatagtttgtgcagaactgga
attagatcttctttaaaggtctgacagaactctgcactaaacccatctgg
tcctgggctttttttttttttttttttttttttggttgggagactattaa
tgactgctttatttctttaggggatatgggactgtttagatcattaactt
gatcctgatttaactttggtaacttctgtctagaaatttgtccatttcgt
ctatgttttccagttttgttgagtatagccttttgtagaacgatctgatg
gtgttttggatttcttcaggatctgttgttatgtctcccttttcattttt
gattttgttaattaggatgctgtccctgtgccatctcgtgagtctggata
agggtttatctatcttgttgattttctcaaagaaccagatcctcgctt

gaattcagcatctatccagccaatcaaacccttaaaccctttcccttgaa
tccccactttctggagtatgatagtaactatgcactgatctttgtcatta
agctgtaagtcactccaatccatgcttcaacaccttgaagcactcactaa
accttcaaagtctctgatcctctgtcaagccacacctaaagatcattttg
gttaataagacaaggaaattgagaaatatatcattgatccaaaagttact
ttttatattaagtaagaattcgaattagagcctaactacgaacttttatt
tggggcaagtagtgctggcattcatatgaagtaaaaggtggagaaaagtt
tgataaagactgtaaagggaggagcctgacatatcagctagtgaaaggtc
actgatcaaacaagatgccacaggaaaggaaaaagtgatcaaacaaacac
agctgagaatccacaaattgattcttgaatgcagaacacagcctatcaca
ataaaggtgtgttcagttctcagagggtgggttatttaatcaacagtgtt
gcctgagccactatttaactggaagaaactgcaatagaatacgacttatc
ttataaatgaataaagagcagatgatttagagacttaactggaccatgta
aaacatgatcaaacataaactcatacctacccttctttaaaaaacaaagg
tgtcaaaatacactggaaacatacagcattttgacatatgaaatcagaga
aactggatgtcccctggtagaagaatgaaggtagacccatagctcttatt
ctttgcaagaattggtccaaaatgtatcagagaacttaatgcaatatttg
aaaaagcaagaagaaaatataggtgaaatactttatgatataggtgcagg
tgagggcacgctcttcatctggagacctgttacactagttcaaattggta
taattttacaacacctcatagggacacttctcttccataacatgctacat
tctcaattacattttcctggacacacatttaatttatgcattgttctctt
atgactgatccattctggctcatctgcagtgggaactcaggttgctctct
caggcatctcccaggtctttctctaactcgaatgacctactaactgaggc
tactggccattctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86220681_86221259
seq2: B6Ng01-250M16.b_46_628 (reverse)

seq1  CTAGACAGATACCAGGTACCAAAGTTAAACCAGGATCAATTTAACGATCT  50
      |||||||||    || ||||||||||||| ||||||||| |||| |||||
seq2  CTAGACAGA----AGTTACCAAAGTTAAATCAGGATCAAGTTAATGATCT  46

seq1  AAACAGTCCCATATCCCCTAAAGAAATATAAGCAGTCATTAATGGTCTCC  100
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AAACAGTCCCATATCCCCTAAAGAAATA-AAGCAGTCATTAATAGTCTCC  95

seq1  ----------AAATCAAAAAAAAAAAAAAAGCCCAGGACCAGATGGGTTT  140
                |||  |||||||||||||||||||||||||||||||||||
seq2  CAACCAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAGGACCAGATGGGTTT  145

seq1  AGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCA  190
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  AGTGCAGAGTTCTGTCAGACCTTTAAAGAAGATCTAATTCCAGTTCTGCA  195

seq1  CAAACTATTCCACAAAATAGAAGTAGAAGGTACTTTACCCATCTCATTCT  240
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CAAACTATTCCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTCT  245

seq1  ATGAAGCCACAATTTCTCTGATACCTAAAACACAGAAAGATCCAACAAAG  290
      |||||||||||||| |||||||||||||  || |||||||||||||||||
seq2  ATGAAGCCACAATTACTCTGATACCTAAGCCAGAGAAAGATCCAACAAAG  295

seq1  ATAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATACT  340
      ||||| |||||||||||||||||||||||||||||  |||||||||||||
seq2  ATAGACAACTTCAGACCAATTTCCCTTATGAATATATATGCAAAAATACT  345

seq1  CAATAAAATTCTCACTAACCGAATCCAAGAACACATTAAAACAATCATCC  390
      |||||||||||||  ||||||||||||| ||||||||||| |||||||||
seq2  CAATAAAATTCTCGATAACCGAATCCAATAACACATTAAAGCAATCATCC  395

seq1  ATCCTGACCAAGTAGGATTTATTCCAGGGGTGCAGGGATGGTTGAATATA  440
      |||||||||||||||| |||||||||  | ||||||||||||| ||||||
seq2  ATCCTGACCAAGTAGGTTTTATTCCATTGATGCAGGGATGGTTTAATATA  445

seq1  CGGAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAT  490
        ||||| |||||| |||||||||||||||||||||||||||||||||| 
seq2  TAGAAATACATCAACGTAATCCATTATATAAACAAACTCAAAGACAAAAG  495

seq1  CCACATGATCATCTCCTTAGATGCGGAAAAAGCATTCAACAGGATCCAAC  540
      |||||||||||||||||||||  |||| ||| ||||  |||  |||||||
seq2  CCACATGATCATCTCCTTAGACACGGAGAAA-CATTTGACAAAATCCAAC  544

seq1  ACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATTC  579
      |||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATTC  583


seq1: chr18_70257779_70258964
seq2: B6Ng01-250M16.g_71_1235

seq1  GAATTCAGCATCTATCCAGCCAATCAAACCCTTAAACCCTTTCCCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCTATCCAGCCAATCAAACCCTTAAACCCTTTCCCTTGAA  50

seq1  TCCCCACTTTCTGGAGTATGATAGTAACTATGCACTGATCTTTGTCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTTTCTGGAGTATGATAGTAACTATGCACTGATCTTTGTCATTA  100

seq1  AGCTGTAAGTCACTCCAATCCATGCTTCAACACCTTGAAGCACTCACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAGTCACTCCAATCCATGCTTCAACACCTTGAAGCACTCACTAA  150

seq1  ACCTTCAAAGTCTCTGATCCTCTGTCAAGCCACACCTAAAGATCATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAAGTCTCTGATCCTCTGTCAAGCCACACCTAAAGATCATTTTG  200

seq1  GTTAATAAGACAAGGAAATTGAGAAATATATCATTGATCCAAAAGTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAAGACAAGGAAATTGAGAAATATATCATTGATCCAAAAGTTACT  250

seq1  TTTTATATTAAGTAAGAATTCGAATTAGAGCCTAACTACGAACTTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATTAAGTAAGAATTCGAATTAGAGCCTAACTACGAACTTTTATT  300

seq1  TGGGGCAAGTAGTGCTGGCATTCATATGAAGTAAAAGGTGGAGAAAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAAGTAGTGCTGGCATTCATATGAAGTAAAAGGTGGAGAAAAGTT  350

seq1  TGATAAAGACTGTAAAGGGAGGAGCCTGACATATCAGCTAGTGAAAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGACTGTAAAGGGAGGAGCCTGACATATCAGCTAGTGAAAGGTC  400

seq1  ACTGATCAAACAAGATGCCACAGGAAAGGAAAAAGTGATCAAACAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCAAACAAGATGCCACAGGAAAGGAAAAAGTGATCAAACAAACAC  450

seq1  AGCTGAGAATCCACAAATTGATTCTTGAATGCAGAACACAGCCTATCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAATCCACAAATTGATTCTTGAATGCAGAACACAGCCTATCACA  500

seq1  ATAAAGGTGTGTTCAGTTCTCAGAGGGTGGGTTATTTAATCAACAGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGTGTGTTCAGTTCTCAGAGGGTGGGTTATTTAATCAACAGTGTT  550

seq1  GCCTGAGCCACTATTTAACTGGAAGAAACTGCAATAGAATACGACTTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGCCACTATTTAACTGGAAGAAACTGCAATAGAATACGACTTATC  600

seq1  TTATAAATGAATAAAGAGCAGATGATTTAGAGACTTAACTGGACCATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGAATAAAGAGCAGATGATTTAGAGACTTAACTGGACCATGTA  650

seq1  AAACATGATCAAACATAAACTCATACCTACCCTTCTTTAAAAAACAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGATCAAACATAAACTCATACCTACCCTTCTTTAAAAAACAAAGG  700

seq1  TGTCAAAATACACTGGAAACATACAGCATTTTGACATATGAAATCAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATACACTGGAAACATACAGCATTTTGACATATGAAATCAGAGA  750

seq1  AACTGGATGTCCCCTGGTAGAAGAATGAAGGTAGACCCATAGCTCTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATGTCCCCTGGTAGAAGAATGAAGGTAGACCCATAGCTCTTATT  800

seq1  CTTTGCAAGAATTGGTCCAAAATGTATCAGAGAACTTAATGCAATATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAGAATTGGTCCAAAATGTATCAGAGAACTTAATGCAATATTTG  850

seq1  AAAAAGCAAGAAGAAAATATAGGTGAAATACTTTATGATATAGGTGCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAGAAGAAAATATAGGTGAAATACTTTATGATATAGGTGCAGG  900

seq1  TGAGGGCACGCTCTTCATCTGGAGACCTGTTACACTAGTTCAAATTGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCACGCTCTTCATCTGGAGACCTGTTACACTAGTTCAAATTGGTA  950

seq1  TAATTTTACAAACACCTCATAGGGAACAACTTTCTCTTCCATAACATGCT  1000
      ||||||||| |||||||||||||| |||   |||||||||||||||||||
seq2  TAATTTTAC-AACACCTCATAGGG-ACA--CTTCTCTTCCATAACATGCT  996

seq1  ACATTCTCCAATTACATTTTTCCTGGACACACATTT-ATTTATGCATTTG  1049
      ||||||| |||||||| ||||||||||||||||||| ||||||||| |||
seq2  ACATTCT-CAATTACA-TTTTCCTGGACACACATTTAATTTATGCA-TTG  1043

seq1  TTTCCTCTTTAATGACCTGATCCATTTCTGCTCATCCTGCCAGTGTGAAC  1099
      ||  |||||  |||| ||||||||||   |||||| ||| ||||| ||||
seq2  TT--CTCTT--ATGA-CTGATCCATTCTGGCTCAT-CTG-CAGTGGGAAC  1086

seq1  TCAAGTTTGCTCTCCTTCAGGGCATCTCCCA-GTCTCTCTCTCTACTCCA  1148
      || || ||||||||  ||| ||||||||||| |||| |||||  ||||  
seq2  TC-AGGTTGCTCTC--TCA-GGCATCTCCCAGGTCTTTCTCT-AACTC--  1129

seq1  AAATGGCCCCTACCTACCTGAGGCTACT-GCCATTCTCA  1186
       ||||   |||| ||| ||||||||||| ||||||||||
seq2  GAATG--ACCTA-CTAACTGAGGCTACTGGCCATTCTCA  1165


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