BAC Information

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BAC

Clone NameB6Ng01-252I24
Chromosome18 (Build37)
Map Location 74,217,689 - 74,218,856
singlet/doubletsinglet
Overlap geneMapk4
Upstream geneLOC100042955, Rkhd2, Smad4, Elac1, Me2, Mro
Downstream gene2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252I24.bB6Ng01-252I24.g
ACCGA059522GA059523
length1,1561,085
definitionB6Ng01-252I24.b B6Ng01-252I24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagtttacctttgaaatctgagacatactgggtttttttttgt
ttttgtttttgtttttttcttttgagaaatggtcttataaacaggtgtag
ttgtttaatcacgaaggaaaaaaaaagatagaaaagtaactctccaaaat
gcaactgtaatcaacaaaactaactcattaattttatccatcaaatacag
aaacatagagtaccatgcactctcggtagtgtgaggaaattccatcgcta
acagcatgctaccaacgagagtacaagctcgcatgcccctttcataaaga
catttaatacagtgtgctcactccactagctaagtaatttctctatctgt
gaatatgtcacagagagaattaaaaaaaaaaaaaaaacaatattccaagc
tgtcgaaagagtgcaggcgcaatgacccagtggggagaacttggagagaa
atttaatatccactaatagtaaagtgttaggataaattaaggatcttaca
aataccaaactacccatccactaaaattatatttaccatgagtttgaatc
atggatatcatttgttctagtattacctggaaaaggattaaaattaaaat
tatacacacacacaatgtggtctcaattatattttaaaatgagccaagaa
aaccattaaaatgtaaaaaaaccaactctgaatagggtataggtagatct
gtttattcttgataccttcacgactgtgcattaatgactctcctaaatag
agacatcaatattatcattcttatcaatcactgtgaaggtatcttaaaat
aagctctataaaacaattccatttcactcagtacaacttctggagctttc
ccgtggtttgttttcagaaccaaggcttgtgtgcacacattcgctgggca
cccgtgtaattagctttgaaatctgtgagctgctttctcagaatgagatg
tcctgcaaagaagcaagtaattaaaactttttcctgcttctcaatttcca
caacaagcttcccgcaacaggagcagagtatccagccagcactgagatcg
aaagacgggtaaccccagcctgcagccccagcctcctcaaggactcgctg
ttacagctgtaactggcatggcagcctccactgctctgcgttgttttcca
gcttac
gaattcagttcccacatcaggcagctcacaacactaaatcaggctccagc
ggaagcctactccctcttctggtctccaagggcactgtgcgcacacaaac
atgaatgactacacacgtagacttaatttttttaaaaaaattacaaactc
ataattcttttttatctcaagtcagggtttaggtacagccttggctatgc
tggaattcactctagatcaggctgaccttgatgcctctgcctctctgcct
ctgcctctctgcctctgcctctctgcctctgcatctctgcctctgcatct
ctgcctctgcatctctgcctctgcctcctgagtgttggtattaggtgtgt
gctaccaccactgggcaaaaagataataattcttaaactaacttcaattt
tttttccttagctctataagctgcagaataatgtcacagcatgccacact
ttatgcatttctttttctgctttgttaggcttttttgagatagactcttt
agcccaggatgactttaaacttccacctccggcacatggtaagtccacca
gagatcatacacagacattcttaaagttgactagaacgtctgtttactgc
cggtggctgaaagagactttcccaaatcatgtaggccccacacctcactg
ctgttggtcttttaagcacacaaaccacattccaggttgacacactgtag
ttaacaagactagttagcaagactagttggcaagaagcagtactacagag
gccaaaagcaaggttagcacttttaggaactttccgagacacaccccgga
accaatgacttagcctttgtttctgttttggcacggggactaggtctttg
ttaatgttgggttccgagacctgaatggtgtttttatttttggtgtcagt
tgcattaaggcgtggggaccttagcaccttccagagtgctaggataagag
gcattgtgctagggttgttgaggattgaacccagaagattcaggttcacc
attgcaggcaagcatccttacaactgaccgtagtcccaagctgtgtgtgt
gtgtgggtgtgtgtggtgtgctggcgagcgtagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_74217689_74218856
seq2: B6Ng01-252I24.b_47_1202

seq1  GAATTCCCAGTTTACCTTTGAAATCTGAGACATACTGGGTTTTTTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGTTTACCTTTGAAATCTGAGACATACTGGGTTTTTTTTTGT  50

seq1  TTTTGTTTTTGTTTTTTTCTTTTGAGAAATGGTCTTATAAACAGGTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTGTTTTTTTCTTTTGAGAAATGGTCTTATAAACAGGTGTAG  100

seq1  TTGTTTAATCACGAAGGAAAAAAAAAGATAGAAAAGTAACTCTCCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATCACGAAGGAAAAAAAAAGATAGAAAAGTAACTCTCCAAAAT  150

seq1  GCAACTGTAATCAACAAAACTAACTCATTAATTTTATCCATCAAATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTAATCAACAAAACTAACTCATTAATTTTATCCATCAAATACAG  200

seq1  AAACATAGAGTACCATGCACTCTCGGTAGTGTGAGGAAATTCCATCGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGAGTACCATGCACTCTCGGTAGTGTGAGGAAATTCCATCGCTA  250

seq1  ACAGCATGCTACCAACGAGAGTACAAGCTCGCATGCCCCTTTCATAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATGCTACCAACGAGAGTACAAGCTCGCATGCCCCTTTCATAAAGA  300

seq1  CATTTAATACAGTGTGCTCACTCCACTAGCTAAGTAATTTCTCTATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATACAGTGTGCTCACTCCACTAGCTAAGTAATTTCTCTATCTGT  350

seq1  GAATATGTCACAGAGAGAATTAAAAAAAAAAAAAAAACAATATTCCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGTCACAGAGAGAATTAAAAAAAAAAAAAAAACAATATTCCAAGC  400

seq1  TGTCGAAAGAGTGCAGGCGCAATGACCCAGTGGGGAGAACTTGGAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGAAAGAGTGCAGGCGCAATGACCCAGTGGGGAGAACTTGGAGAGAA  450

seq1  ATTTAATATCCACTAATAGTAAAGTGTTAGGATAAATTAAGGATCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATATCCACTAATAGTAAAGTGTTAGGATAAATTAAGGATCTTACA  500

seq1  AATACCAAACTACCCATCCACTAAAATTATATTTACCATGAGTTTGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAAACTACCCATCCACTAAAATTATATTTACCATGAGTTTGAATC  550

seq1  ATGGATATCATTTGTTCTAGTATTACCTGGAAAAGGATTAAAATTAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATCATTTGTTCTAGTATTACCTGGAAAAGGATTAAAATTAAAAT  600

seq1  TATACACACACACAATGTGGTCTCAATTATATTTTAAAATGAGCCAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACACACAATGTGGTCTCAATTATATTTTAAAATGAGCCAAGAA  650

seq1  AACCATTAAAATGTAAAAAAACCAACTCTGAATAGGGTATAGGTAGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTAAAATGTAAAAAAACCAACTCTGAATAGGGTATAGGTAGATCT  700

seq1  GTTTATTCTTGATACCTTCACGACTGTGCATTAATGACTCTCCTAAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTTGATACCTTCACGACTGTGCATTAATGACTCTCCTAAATAG  750

seq1  AGACATCAATATTATCATTCTTATCAATCACTGTGAAGGTATCTTAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCAATATTATCATTCTTATCAATCACTGTGAAGGTATCTTAAAAT  800

seq1  AAGCTCTATAAAACAATTCCA-TTCACTCAGTACAACTTCTGGAGCTTTC  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGCTCTATAAAACAATTCCATTTCACTCAGTACAACTTCTGGAGCTTTC  850

seq1  CCGTGG-TTGTTTTCAGAA-CAAGGCTTGTGTGCACACA-TCGCT-GGCA  895
      |||||| |||||||||||| ||||||||||||||||||| ||||| ||||
seq2  CCGTGGTTTGTTTTCAGAACCAAGGCTTGTGTGCACACATTCGCTGGGCA  900

seq1  CCCGTGTAATTAGCTT--GAATCTGTGAGCTGCTTTCTCAGAATGAGATG  943
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  CCCGTGTAATTAGCTTTGAAATCTGTGAGCTGCTTTCTCAGAATGAGATG  950

seq1  TCCTGGAAAGAAGGCAAGTAATTAAACCTTTTTCCTGCCTCCTCAATTTT  993
      ||||| |||||| ||||||||||||| |||||||||| || ||||| |||
seq2  TCCTGCAAAGAA-GCAAGTAATTAAAACTTTTTCCTG-CTTCTCAA-TTT  997

seq1  CCACCAACAAGC-TCCCGCAACCAGGAAGCCAGGAGTATCCCAGCAGCAC  1042
      ||| |||||||| |||||||| |||| |||   ||||||||   ||||||
seq2  CCA-CAACAAGCTTCCCGCAA-CAGG-AGC--AGAGTATCCAGCCAGCAC  1042

seq1  TGAGAATCGAAAGACAGGGTAAACCCCCAGCTGCCAGCCCCAGCCTCCTC  1092
      |||| |||||||||| ||||||  |||||||   ||||||||||||||||
seq2  TGAG-ATCGAAAGAC-GGGTAA--CCCCAGCCTGCAGCCCCAGCCTCCTC  1088

seq1  AGGGAACTCGCTGTAACAGCTGTAACCGTGGCGTGGCGAGCCTTCCAACT  1142
      | || ||||||||| |||||||||||  |||| |||| |||||  | |||
seq2  AAGG-ACTCGCTGTTACAGCTGTAAC--TGGCATGGC-AGCCT--CCACT  1132

seq1  GCTTCCTGCCTTGGTTTCCAGCTTAC  1168
      |||  |||| ||| ||||||||||||
seq2  GCT--CTGCGTTGTTTTCCAGCTTAC  1156