BAC Information

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BAC

Clone NameB6Ng01-253B22
Chromosome18 (Build37)
Map Location 71,867,117 - 71,868,097
singlet/doubletsinglet
Overlap geneDcc
Upstream genenone
Downstream geneLOC629684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253B22.bB6Ng01-253B22.g
ACCGA059940GA059941
length9861,140
definitionB6Ng01-253B22.b B6Ng01-253B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaacgtactgtattacacacactgtctcaaatttcatggcat
cagactgactttactgtccctgctaagagcctgactacttgtttttgagc
ctgaacacaatcaacttgtaaataatatttgataaagttgaaaacccttc
ctcatgaaatgcttgatcttttctgaggacctcactctctatttctttta
gtattattagcaagttgagcttctctcctatttccttgatggatggtgtg
tacttttctatggtgtaattcttaattcacttcttttcaaaattgagata
gttgtctctctgggttgtattttattgtgcatcttgtattgatatatttt
acaatatttatttttgtaccagaactttcctgaaagcttcactcataggt
actgttttgcataatgtgagtaggtgcatgtatgtgtgcctatgtgtctg
cttgtctgtctgtgggtttgtgtgtggtgtatgtatatgttatgaagcat
gtttatgtgtgcatacctgcatatgaaagggcatatggagaaggttggca
cttggtgtcttcatttattactacttccttatttttaatgtgtttattta
tttacttatttatttaatttactttaacttacctccacatcacactttcc
cctccctattcttctcccagttcctctatctctctgccctaaccccattg
cccctatccctatatcatcagagaaggaaaggcctcccatagatagtaat
cttcctttttatatcaaggtgcagtagaactaggtgcatcttctcctatt
tgaacctagacaatgcatcccagtgagaggaaaggatcccaaaggcaggc
aaggggacagtactttcagtttgcctagaatggctacctaatagtttctg
ggatttgcctatttcccattttctcctagccatgaagttacagatgtgca
ctttccatgctagatgtgattgggggggtgggggaa

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggctcccaat
ggaggagctagagaaagtacccaagagctaaagggacttcacctatagtg
gacacatatgactacagtaccctgagctctgactctagctgcatatgtat
caaagatgctagtcgtcatcactgaaagagaggtcatgacaccgcgaact
ggtgccggttacaggacgcaggtcacgggggggaaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71867117_71868097
seq2: B6Ng01-253B22.b_43_1028 (reverse)

seq1  -TCCCCCCACCCCCCAATCACATCTAGCATGG-AAGTGCACATCTGTAAC  48
       ||||||  ||||||||||||||||||||||| |||||||||||||||||
seq2  TTCCCCCACCCCCCCAATCACATCTAGCATGGAAAGTGCACATCTGTAAC  50

seq1  CTCATGGCTAGGAGAAAATGGGAAATAGGCAAATCCCAG-AACTATTAGG  97
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCATGGCTAGGAGAAAATGGGAAATAGGCAAATCCCAGAAACTATTAGG  100

seq1  TAGCCATTCTAGGCAAACTG-AAGTACTGTCCCCTTGCCTGCCTTTGGGA  146
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGCCATTCTAGGCAAACTGAAAGTACTGTCCCCTTGCCTGCCTTTGGGA  150

seq1  TCCTTTCCTCTCACTGGGATGCATTGTCTAGGTTC-AATAGGAGAAGATG  195
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCTTTCCTCTCACTGGGATGCATTGTCTAGGTTCAAATAGGAGAAGATG  200

seq1  CACCTAGTTCTACTGCACCTTGATATAAAAAGGAAGATTACTATCTATGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGTTCTACTGCACCTTGATATAAAAAGGAAGATTACTATCTATGG  250

seq1  GAGGCCTTTCCTTCTCTGATGATATAGGGATAGGGGCAATGGGGTTAGGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTTTCCTTCTCTGATGATATAGGGATAGGGGCAATGGGGTTAGGG  300

seq1  CAGAGAGATAGAGGAACTGGGAGAAGAATAGGGAGGGGAAAGTGTGATGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGATAGAGGAACTGGGAGAAGAATAGGGAGGGGAAAGTGTGATGT  350

seq1  GGAGGTAAGTTAAAGTAAATTAAATAAATAAGTAAATAAATAAACACATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAAGTTAAAGTAAATTAAATAAATAAGTAAATAAATAAACACATT  400

seq1  AAAAATAAGGAAGTAGTAATAAATGAAGACACCAAGTGCCAACCTTCTCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGGAAGTAGTAATAAATGAAGACACCAAGTGCCAACCTTCTCC  450

seq1  ATATGCCCTTTCATATGCAGGTATGCACACATAAACATGCTTCATAACAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCCTTTCATATGCAGGTATGCACACATAAACATGCTTCATAACAT  500

seq1  ATACATACACCACACACAAACCCACAGACAGACAAGCAGACACATAGGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACACCACACACAAACCCACAGACAGACAAGCAGACACATAGGCA  550

seq1  CACATACATGCACCTACTCACATTATGCAAAACAGTACCTATGAGTGAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATGCACCTACTCACATTATGCAAAACAGTACCTATGAGTGAAG  600

seq1  CTTTCAGGAAAGTTCTGGTACAAAAATAAATATTGTAAAATATATCAATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGAAAGTTCTGGTACAAAAATAAATATTGTAAAATATATCAATA  650

seq1  CAAGATGCACAATAAAATACAACCCAGAGAGACAACTATCTCAATTTTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCACAATAAAATACAACCCAGAGAGACAACTATCTCAATTTTGA  700

seq1  AAAGAAGTGAATTAAGAATTACACCATAGAAAAGTACACACCATCCATCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTGAATTAAGAATTACACCATAGAAAAGTACACACCATCCATCA  750

seq1  AGGAAATAGGAGAGAAGCTCAACTTGCTAATAATACTAAAAGAAATAGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAGGAGAGAAGCTCAACTTGCTAATAATACTAAAAGAAATAGAG  800

seq1  AGTGAGGTCCTCAGAAAAGATCAAGCATTTCATGAGGAAGGGTTTTCAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTCCTCAGAAAAGATCAAGCATTTCATGAGGAAGGGTTTTCAAC  850

seq1  TTTATCAAATATTATTTACAAGTTGATTGTGTTCAGGCTCAAAAACAAGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAATATTATTTACAAGTTGATTGTGTTCAGGCTCAAAAACAAGT  900

seq1  AGTCAGGCTCTTAGCAGGGACAGTAAAGTCAGTCTGATGCCATGAAATTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGCTCTTAGCAGGGACAGTAAAGTCAGTCTGATGCCATGAAATTT  950

seq1  GAGACAGTGTGTGTAATACAGTACGTTAGAGAATTC  981
      ||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTGTGTGTAATACAGTACGTTAGAGAATTC  986


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