BAC Information

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BAC

Clone NameB6Ng01-254F05
Chromosome18 (Build37)
Map Location 49,498,915 - 49,500,141
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042323, LOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254F05.bB6Ng01-254F05.g
ACCGA060818GA060819
length1,215959
definitionB6Ng01-254F05.b B6Ng01-254F05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccctttgtgacatgaaagtaggaaaactgcatgcttatcagta
cttcgataagtcttgtttttgacagatgggtttctggtttcttttatctt
catcagtaaaatatgaagcaagggtagcaggttctcaacggaagtacagg
taagaattgcacaggcaaggcttgagggtataaggacagaaggagatgca
aagtaggtaccagtttgcctataaaacagaattgtatctaacctagtgtg
gtattacatagtaaaataactgaaggtccactatctgttatataccaaaa
tctatgtattcattttatgcttccatttatagctactttctcccaaagaa
ttgcactttcctttttcttttctttctttttatttttgcttgtggactgt
acatgtatgtgtgtttttgcattatgaaggtgaatgtgtatcagtatagg
tgcacgtgtgtaccagtgcatgtggagacccaaggtcgatgtcaggaatc
attcttgattgctcttctgggtttaaggcagggactctcaattgaaccca
gagctcactgatctggctagtcttgctggccagcttgctcttggagagtt
cctgtttttgccttctgaagctagaattacctgcaggctttcaagcccag
ctgacatttaagtgggtttctggggatctgaactccactcctcgagcctg
cagagaaatcactttagctgcctagctctctccagcccccagtgttctgt
ctttatcctgccctccactgattactctgcttaaattttcatctctaagc
ctccagtcagttagctcttgtatggtcccaaccacctcttcattgccgag
cttactgtccctctcagtccttatgctcttagcttcttggcagcattcca
cacctttcggatatttgcgtacttttttcttttggaaaggctttctcttc
tttgcttgtggcttaccaggcgcttggtggttgcatcacatacctgcgaa
gcataccatctcatggaccactctcccctctgctttcgttctgtcatcat
ctaagcattgaaggagtccctgagacctatctcagtcctcctttctatca
ggtcttgcacagctctcagtgatgattcagatcatggcctttagagtcac
caatgctattgaacacacagcctcatggatgtcaaggcttgacttaattg
atccctctcttaaaa

gaattcaataacagaaacaacagaaaacctacaaactcatgaaaactgaa
catctactcagtgatgactgggtcagggaagaaatgaataaagaaattag
atactttctagaattcaatcaaaatgagagaacatactcaaacttatggg
atataatggaaaaagtgctaagaggaaagttgatagcactaagtgccttc
ataaaaaaaattggagaaatctcaccgggtgatggtggcacatgccttta
atcccagtacttgggaagcagaggcaggcagatttctaagttcaaggcca
gcctggtctacaaagtgagttccaggacagccagggctatacagagaaac
cctgtctcgaaaaacaaaacaaaacaaaaagaaaacaaacaaaaaaaaaa
aagaagaaatctcaacagcacatttaaaagttctaaaacaaaaagaagca
aacacccacaagaagagtagacagcagcgaataatcaaactgaggactga
aatcaatgaattagaaacaaagggaacaattagaagactcaacaaaacca
agagctgattctttgagaaaatcaacaagacagaccaacccttagccaaa
ctgatgaaaagacagagagacagtacccaaattaacaaaatcagaagaga
aaagaacaaaacaagacactgaggaaatccaaagaatcattaggtcttac
ttcaaaagcctgtacttcacaaaattggaaaatgtaaacaaaatggatga
ctttccagctagatatcacttaccaaagttaagtcaaaatcaagtaaact
attttaaatagacccataaacactcaagaaaaatagaaactggtgttcct
ttgtctggcctcagtgagagaggatgcatgcagtcctgatgagacttgat
gtgacagcatgggttgatactggggttgggagaattcccatctaagtaga
atggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49498915_49500141
seq2: B6Ng01-254F05.b_43_1257 (reverse)

seq1  TTTTAAGAGAAGGAATCAATATAGTTCAAAGCCCTCTGACATTCCCATGA  50
      ||||||||| ||| ||||||  |||   |||||   ||||||  ||||||
seq2  TTTTAAGAG-AGGGATCAATTAAGT--CAAGCC--TTGACAT--CCATGA  43

seq1  GGCCTTGTGTGGTCAATAGCATTGGGTGACTTCTTAAAGCCATGATCTGA  100
      |||  |||||| ||||||||||| |||||| ||| || ||||||||||||
seq2  GGC--TGTGTGTTCAATAGCATT-GGTGAC-TCTAAAGGCCATGATCTGA  89

seq1  AAGACATCACCTGAGAAGCTGTGC-AGACCTGGATAGAAAGGAGGACTGA  149
      |   ||||| ||||| |||||||| |||||| ||||||||||||||||||
seq2  A--TCATCA-CTGAG-AGCTGTGCAAGACCT-GATAGAAAGGAGGACTGA  134

seq1  GGATAGGTCTCAGGGACT-CTTCAATGCTTAGATGATGACAGAACGAAAG  198
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  -GATAGGTCTCAGGGACTCCTTCAATGCTTAGATGATGACAGAACGAAAG  183

seq1  CAGAGGGAGAAGTGGTCCATGAGATGGTATGCTTCGCAGGTATGTGATGC  248
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGAGAGTGGTCCATGAGATGGTATGCTTCGCAGGTATGTGATGC  233

seq1  AACCA-CAAGCGCCTGGTAAGCCACAAGCAAAGAAGAGAAAGCCTTTCCA  297
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAAGCGCCTGGTAAGCCACAAGCAAAGAAGAGAAAGCCTTTCCA  283

seq1  AAAGAAAAAAGTACGCAAATAT-CGAAAGGTGTGGAATGCTGCCAAGAAG  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGAAAAAAGTACGCAAATATCCGAAAGGTGTGGAATGCTGCCAAGAAG  333

seq1  CTAAGAGCATAAGGACTGAGA-GGACAGTAAGCTCGGCAATGAAGAGGTG  395
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTAAGAGCATAAGGACTGAGAGGGACAGTAAGCTCGGCAATGAAGAGGTG  383

seq1  GTTGGGACCATACAAGAGCTAACTGACTGGAGGCTTAGAGATGAAAATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGACCATACAAGAGCTAACTGACTGGAGGCTTAGAGATGAAAATTT  433

seq1  AAGCAGAGTAATCAGTGGAGGGCAGGATAAAGACAGAACACTGGGGGCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGTAATCAGTGGAGGGCAGGATAAAGACAGAACACTGGGGGCTG  483

seq1  GAGAGAGCTAGGCAGCTAAAGTGATTTCTCTGCAGGCTCGAGGAGTGGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCTAGGCAGCTAAAGTGATTTCTCTGCAGGCTCGAGGAGTGGAG  533

seq1  TTCAGATCCCCAGAAACCCACTTAAATGTCAGCTGGGCTTGAAAGCCTGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCCCCAGAAACCCACTTAAATGTCAGCTGGGCTTGAAAGCCTGC  583

seq1  AGGTAATTCTAGCTTCAGAAGGCAAAAACAGGAACTCTCCAAGAGCAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATTCTAGCTTCAGAAGGCAAAAACAGGAACTCTCCAAGAGCAAGC  633

seq1  TGGCCAGCAAGACTAGCCAGATCAGTGAGCTCTGGGTTCAATTGAGAGTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCAAGACTAGCCAGATCAGTGAGCTCTGGGTTCAATTGAGAGTC  683

seq1  CCTGCCTTAAACCCAGAAGAGCAATCAAGAATGATTCCTGACATCGACCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTTAAACCCAGAAGAGCAATCAAGAATGATTCCTGACATCGACCT  733

seq1  TGGGTCTCCACATGCACTGGTACACACGTGCACCTATACTGATACACATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCCACATGCACTGGTACACACGTGCACCTATACTGATACACATT  783

seq1  CACCTTCATAATGCAAAAACACACATACATGTACAGTCCACAAGCAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCATAATGCAAAAACACACATACATGTACAGTCCACAAGCAAAAA  833

seq1  TAAAAAGAAAGAAAAGAAAAAGGAAAGTGCAATTCTTTGGGAGAAAGTAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAGAAAAGAAAAAGGAAAGTGCAATTCTTTGGGAGAAAGTAG  883

seq1  CTATAAATGGAAGCATAAAATGAATACATAGATTTTGGTATATAACAGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATGGAAGCATAAAATGAATACATAGATTTTGGTATATAACAGAT  933

seq1  AGTGGACCTTCAGTTATTTTACTATGTAATACCACACTAGGTTAGATACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACCTTCAGTTATTTTACTATGTAATACCACACTAGGTTAGATACA  983

seq1  ATTCTGTTTTATAGGCAAACTGGTACCTACTTTGCATCTCCTTCTGTCCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTTATAGGCAAACTGGTACCTACTTTGCATCTCCTTCTGTCCT  1033

seq1  TATACCCTCAAGCCTTGCCTGTGCAATTCTTACCTGTACTTCCGTTGAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTCAAGCCTTGCCTGTGCAATTCTTACCTGTACTTCCGTTGAGA  1083

seq1  ACCTGCTACCCTTGCTTCATATTTTACTGATGAAGATAAAAGAAACCAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTACCCTTGCTTCATATTTTACTGATGAAGATAAAAGAAACCAGA  1133

seq1  AACCCATCTGTCAAAAACAAGACTTATCGAAGTACTGATAAGCATGCAGT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATCTGTCAAAAACAAGACTTATCGAAGTACTGATAAGCATGCAGT  1183

seq1  TTTCCTACTTTCATGTCACAAAGGGTGAATTC  1227
      ||||||||||||||||||||||||||||||||
seq2  TTTCCTACTTTCATGTCACAAAGGGTGAATTC  1215


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