BAC Information

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BAC

Clone NameB6Ng01-254F17
Chromosome18 (Build37)
Map Location 42,607,417 - 42,607,944
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1, LOC433177, Lars, EG625929, LOC100042757, Rbm27, Pou4f3, LOC100042767
Downstream geneLOC100042027, Tcerg1, Gpr151, LOC100042037, Ppp2r2b, LOC100042046, LOC100042051, EG666594, Stk32a, Dpysl3, LOC100042074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254F17.bB6Ng01-254F17.g
ACCGA060842GA060843
length579528
definitionB6Ng01-254F17.b B6Ng01-254F17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggccaccagcccagggtggccccatccacaatggactgggct
tcccccccattaatcactaattttaagaaaatgctgggcgggcagtggtg
gtgtcccagcacttgggaggcagaggcaagtgggtctctaagctggaggc
cagcctggtctacagagtgagttccaggatagccagggctacatggagaa
accctgtcttaatctagatagatagatagatagatagatagatagataga
tagatagatatagaaagaaagaaaggaaggaaggaaggaagagagagaga
gagagagagagagagagagagagagagagagagagagagaggagtccctc
caagcttgcctacagccccagtctcatggaggcattttcttgattgggga
accctcctctcaaatgactctagcttgtgtcaacctaaagctagccagca
ccactaaccccttgtcaagtcaacctaacacacaaacgtatcattaagtc
ataacctgtcctctctagttcatctctaccatcatataccaataaagata
tcacaatacaaaacattttacaaacataa
cctgttcctgcttctctagtgctgggattataggcatgtactgcctgcct
ttcttcacctttcagatgggtctgagtgccagtcctcctgcttgtgtaaa
tttacagtgtgtatgtctatgtgtatgtctccttagtgtctctgcccaga
ttttgcctgtttattttttgtggctcaggctggcttacgactcacaatct
ttctgcctcttgagtgctaagattataggtgtagcctccatgcctggctc
ctaagacaggaaagaatgggaactggaaatctatttgggctgccacagcc
taacttcctgactggcaacctgcagaagtgggggcaggggataatgggga
taatgggtctttccctagtccttgatccaaggtttttaaaaaaagggagg
agggctggatatatggctcatcaggtaaaagcactgactgctctaccgaa
ggtcctgaattcaaattccagcaatatggtggctcacaaccatccgcaat
gagatctgacgccctcttctggggagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_42607417_42607944
seq2: B6Ng01-254F17.g_73_600

seq1  CCTGTTCCTGCTTCTCTAGTGCTGGGATTATAGGCATGTACTGCCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCTGCTTCTCTAGTGCTGGGATTATAGGCATGTACTGCCTGCCT  50

seq1  TTCTTCACCTTTCAGATGGGTCTGAGTGCCAGTCCTCCTGCTTGTGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACCTTTCAGATGGGTCTGAGTGCCAGTCCTCCTGCTTGTGTAAA  100

seq1  TTTACAGTGTGTATGTCTATGTGTATGTCTCCTTAGTGTCTCTGCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTGTGTATGTCTATGTGTATGTCTCCTTAGTGTCTCTGCCCAGA  150

seq1  TTTTGCCTGTTTATTTTTTGTGGCTCAGGCTGGCTTACGACTCACAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTGTTTATTTTTTGTGGCTCAGGCTGGCTTACGACTCACAATCT  200

seq1  TTCTGCCTCTTGAGTGCTAAGATTATAGGTGTAGCCTCCATGCCTGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCTTGAGTGCTAAGATTATAGGTGTAGCCTCCATGCCTGGCTC  250

seq1  CTAAGACAGGAAAGAATGGGAACTGGAAATCTATTTGGGCTGCCACAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACAGGAAAGAATGGGAACTGGAAATCTATTTGGGCTGCCACAGCC  300

seq1  TAACTTCCTGACTGGCAACCTGCAGAAGTGGGGGCAGGGGATAATGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCTGACTGGCAACCTGCAGAAGTGGGGGCAGGGGATAATGGGGA  350

seq1  TAATGGGTCTTTCCCTAGTCCTTGATCCAAGGTTTTTAAAAAAAGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGTCTTTCCCTAGTCCTTGATCCAAGGTTTTTAAAAAAAGGGAGG  400

seq1  AGGGCTGGAGAGATGGCTCAGCAGGTAAAAGCACTGACTGCTCTACCGAA  450
      ||||||||| | |||||||| |||||||||||||||||||||||||||||
seq2  AGGGCTGGATATATGGCTCATCAGGTAAAAGCACTGACTGCTCTACCGAA  450

seq1  GGTCCTGAATTCAAATTCCAGCAATATGGTGGCTCACAACCATCCGTAAT  500
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTCCTGAATTCAAATTCCAGCAATATGGTGGCTCACAACCATCCGCAAT  500

seq1  GAGATCTGACGCCCTCTTCTGGGGTGTC  528
      |||||||||||||||||||||||| |||
seq2  GAGATCTGACGCCCTCTTCTGGGGAGTC  528