BAC Information

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BAC

Clone NameB6Ng01-255L12
Chromosome18 (Build37)
Map Location 3,388,481 - 3,531,147
singlet/doubletdoublet
Overlap geneCul2, EG621501, Bambi
Upstream geneLOC664794, Crem, EG621440
Downstream geneLOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255L12.bB6Ng01-255L12.g
ACCGA061858GA061859
length1,1181,118
definitionB6Ng01-255L12.b B6Ng01-255L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,530,028 - 3,531,147)(3,388,481 - 3,389,616)
sequence
gaattcactttggggatcaaattccagctttggggcacattgaagatttg
caaatacaatttacattttatgattttgcaaaataaattctgatactagt
cactgaaattttgaaattgtaccactctctcttttgctttatttttgcta
tttttttggttttggtttttgttttaaagacagtatctcactatatttca
atggctgtcatggatctcaatatgcagaccaggctagccttaaacttgta
agcctcttcctgcctcagcctctccaatgctggattgcaagcactaatca
gtgtgctctgctcttctttattagaaactaaaaatcaaaagctggggata
cagctcagtggcaaagtcctcagtatgcatgggtcctagggtcagttcct
agattaaaagtaaaacaaaacaaataaacaaacaaacaaaacaagcaaaa
accacacatcaaaacaattctggactgggaacatagctcattagtttaac
ccagcaaggatgaaatgaggttctatccccaagagaaggcaccctagggg
tacaggaccactgaatgagtaagtctaatatagcattctctatacagtta
atatttccagcgggaagttacatacttttaaaatgtcttaactggatata
atggctcatacctgtaatcctagcacttaagagcctaaggcagaaggatt
aacaccaactccaaaaccagcttggacctcatagggactttgaattgagc
ataagtagttatgtgaagtcctgtttccccaaaacaaaacaaaacaaaac
aaacccatgtgacaaataatttcattccctaatataaagcatgggatgtc
atcagaactggctggtttctgctttctttgactttcaagcaggaattgcg
aggaagagaggagactggtattgcttttttctttgtcttccatgtccatc
aagaaccaaagagatggtttgaaaagtttaatattgtcatccgttgaaga
aaagggcccattagaaaaataaagcctttcccactgaaccagatggtcac
acataaaactgaatcttacctcacaaataatctgagagagatttccttct
catcctggaatggagaga

gaattcactataaagactcagagatctaattgcctcttcccatcaagtcc
ttagataagaggagagttccacagtgcctgcctaagattcttaaattttc
tttggtgttttgaaacttggcttcttctagcataacctgatctggaactt
actatgggatggacagtaaccttgaactctcctgcttccacttctgaagt
agggtttctgagtgctctggcacactttgtttctatgtgtgttttgctct
cttggaatgttgtttactactttgaattctctctgctgaagaatttagac
gggagacaagttttcttaaattgttttaaactttgtttcttttttaattt
gagacctggtcttgctgtgcagcccaggctaggctagaattcattgtgta
tccttgcctagcctcacactcttactcctcctgttcttagcctctgaagt
ggctgggttgcagctgtgtgcaaacagatacttacaaagttgttatgaac
tctcaggtagttgtcttagatatttctggaaaaaaattggtctttttttt
ttttttttgagactgctcattctttgtatcctctccctttccatgatggt
gtgtagttaagactggcctcaaaaatatttaataagtgccaccacatatg
attttatgagcagtggccaggcaggcactcttaccaactaagcttcgtct
cacgctcagggtggttctcgacctagaactgggccagtgaacttcttgtt
gttgctgctgttatctttgtctctttttggtttatacaggagattaaaga
gtcaattttccagtccagagcaacaacctttgagaaagtagtactttttg
aagtattagacaccactgacaagacattaaatgtgttatcttatgcttaa
aactctaaatgtgcaggtgtaatggcaatttggaaggtttcaattaacca
aaggattttctgttatagacttcatcatttagtggtaaccatggttagtc
ataaaatataggcctcattacatgtcaggatttttcataaaataggtgac
agctatattaatttctaatctgctagctagttacatctgcacattcttgc
agtctgaacaacctaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3530028_3531147
seq2: B6Ng01-255L12.b_51_1168 (reverse)

seq1  TCTCTCATTTCCAGGATGAGAA-GAAATCTCTCTTCAGATTTAATTTGTG  49
      ||||||  |||||||||||||| |||||||||| |||||||  |||||||
seq2  TCTCTCCATTCCAGGATGAGAAGGAAATCTCTC-TCAGATT--ATTTGTG  47

seq1  AGGTTAGATTTCAGTTTTATGTGTTGACCATCCTGGTTCAGTTGGGAAAG  99
      |||| ||| |||||||||||||| ||||||| ||||||||| ||||||| 
seq2  AGGTAAGA-TTCAGTTTTATGTG-TGACCAT-CTGGTTCAG-TGGGAAA-  92

seq1  GGCTTTA-TTTTCTAAT-GGCCCTTTTCTTC-ACGGATGACAATATT-AA  145
      ||||||| ||||||||| ||||||||||||| ||||||||||||||| ||
seq2  GGCTTTATTTTTCTAATGGGCCCTTTTCTTCAACGGATGACAATATTAAA  142

seq1  CTTTTC-AACCATCTCTTTTGGTTCTTGATGGACATGGAAGACAAAAGAA  194
      |||||| ||||||||| |||||||||||||||||||||||||||||  ||
seq2  CTTTTCAAACCATCTC-TTTGGTTCTTGATGGACATGGAAGACAAAGAAA  191

seq1  AAAGCAATACCAGTCTCCTCTCTTCCTCGCAATTCCTGCTTGAAAGTCAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATACCAGTCTCCTCTCTTCCTCGCAATTCCTGCTTGAAAGTCAA  241

seq1  AG-AAGCAGAAACCAGCCAGTTCTGATGACATCCCATGCTTTATATTAGG  293
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAGAAACCAGCCAGTTCTGATGACATCCCATGCTTTATATTAGG  291

seq1  GAATGAAATTATTTGTCACATGGGTTTGTTTTGTTTTGTTTTGTTTTGGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAATTATTTGTCACATGGGTTTGTTTTGTTTTGTTTTGTTTTGGG  341

seq1  GAAACAGGACTTCACATAACTACTTATGCTCAATTCAAAGTCCCTATGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGACTTCACATAACTACTTATGCTCAATTCAAAGTCCCTATGAG  391

seq1  GTCCAAGCTGGTTTTGGAGTTGGTGTTAATCCTTCTGCCTTAGGCTCTTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCTGGTTTTGGAGTTGGTGTTAATCCTTCTGCCTTAGGCTCTTA  441

seq1  AGTGCTAGGATTACAGGTATGAGCCATTATATCCAGTTAAGACATTTTAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAGGATTACAGGTATGAGCCATTATATCCAGTTAAGACATTTTAA  491

seq1  AAGTATGTAACTTCCCGCTGGAAATATTAACTGTATAGAGAATGCTATAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTAACTTCCCGCTGGAAATATTAACTGTATAGAGAATGCTATAT  541

seq1  TAGACTTACTCATTCAGTGGTCCTGTACCCCTAGGGTGCCTTCTCTTGGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTACTCATTCAGTGGTCCTGTACCCCTAGGGTGCCTTCTCTTGGG  591

seq1  GATAGAACCTCATTTCATCCTTGCTGGGTTAAACTAATGAGCTATGTTCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAACCTCATTTCATCCTTGCTGGGTTAAACTAATGAGCTATGTTCC  641

seq1  CAGTCCAGAATTGTTTTGATGTGTGGTTTTTGCTTGTTTTGTTTGTTTGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAGAATTGTTTTGATGTGTGGTTTTTGCTTGTTTTGTTTGTTTGT  691

seq1  TTATTTGTTTTGTTTTACTTTTAATCTAGGAACTGACCCTAGGACCCATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTTTTGTTTTACTTTTAATCTAGGAACTGACCCTAGGACCCATG  741

seq1  CATACTGAGGACTTTGCCACTGAGCTGTATCCCCAGCTTTTGATTTTTAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAGGACTTTGCCACTGAGCTGTATCCCCAGCTTTTGATTTTTAG  791

seq1  TTTCTAATAAAGAAGAGCAGAGCACACTGATTAGTGCTTGCAATCCAGCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATAAAGAAGAGCAGAGCACACTGATTAGTGCTTGCAATCCAGCA  841

seq1  TTGGAGAGGCTGAGGCAGGAAGAGGCTTACAAGTTTAAGGCTAGCCTGGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGGCTGAGGCAGGAAGAGGCTTACAAGTTTAAGGCTAGCCTGGT  891

seq1  CTGCATATTGAGATCCATGACAGCCATTGAAATATAGTGAGATACTGTCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATTGAGATCCATGACAGCCATTGAAATATAGTGAGATACTGTCT  941

seq1  TTAAAACAAAAACCAAAACCAAAAAAATAGCAAAAATAAAGCAAAAGAGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAAAAACCAAAACCAAAAAAATAGCAAAAATAAAGCAAAAGAGA  991

seq1  GAGTGGTACAATTTCAAAATTTCAGTGACTAGTATCAGAATTTATTTTGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTACAATTTCAAAATTTCAGTGACTAGTATCAGAATTTATTTTGC  1041

seq1  AAAATCATAAAATGTAAATTGTATTTGCAAATCTTCAATGTGCCCCAAAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATAAAATGTAAATTGTATTTGCAAATCTTCAATGTGCCCCAAAG  1091

seq1  CTGGAATTTGATCCCCAAAGTGAATTC  1120
      |||||||||||||||||||||||||||
seq2  CTGGAATTTGATCCCCAAAGTGAATTC  1118


seq1: chr18_3388481_3389616
seq2: B6Ng01-255L12.g_68_1185

seq1  GAATTCACTATAAAGACTCAGAGATCTAATTGCCTCTTCCCATCAAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAAAGACTCAGAGATCTAATTGCCTCTTCCCATCAAGTCC  50

seq1  TTAGATAAGAGGAGAGTTCCACAGTGCCTGCCTAAGATTCTTAAATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAGAGGAGAGTTCCACAGTGCCTGCCTAAGATTCTTAAATTTTC  100

seq1  TTTGGTGTTTTGAAACTTGGCTTCTTCTAGCATAACCTGATCTGGAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTTTTGAAACTTGGCTTCTTCTAGCATAACCTGATCTGGAACTT  150

seq1  ACTATGGGATGGACAGTAACCTTGAACTCTCCTGCTTCCACTTCTGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGGATGGACAGTAACCTTGAACTCTCCTGCTTCCACTTCTGAAGT  200

seq1  AGGGTTTCTGAGTGCTCTGGCACACTTTGTTTCTATGTGTGTTTTGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTGAGTGCTCTGGCACACTTTGTTTCTATGTGTGTTTTGCTCT  250

seq1  CTTGGAATGTTGTTTACTACTTTGAATTCTCTCTGCTGAAGAATTTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATGTTGTTTACTACTTTGAATTCTCTCTGCTGAAGAATTTAGAC  300

seq1  GGGAGACAAGTTTTCTTAAATTGTTTTAAACTTTGTTTCTTTTTTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAAGTTTTCTTAAATTGTTTTAAACTTTGTTTCTTTTTTAATTT  350

seq1  GAGACCTGGTCTTGCTGTGCAGCCCAGGCTAGGCTAGAATTCATTGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTGGTCTTGCTGTGCAGCCCAGGCTAGGCTAGAATTCATTGTGTA  400

seq1  TCCTTGCCTAGCCTCACACTCTTACTCCTCCTGTTCTTAGCCTCTGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCCTAGCCTCACACTCTTACTCCTCCTGTTCTTAGCCTCTGAAGT  450

seq1  GGCTGGGTTGCAGCTGTGTGCAAACAGATACTTACAAAGTTGTTATGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGTTGCAGCTGTGTGCAAACAGATACTTACAAAGTTGTTATGAAC  500

seq1  TCTCAGGTAGTTGTCTTAGATATTTCTGGAAAAAAATTGGTCTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTAGTTGTCTTAGATATTTCTGGAAAAAAATTGGTCTTTTTTTT  550

seq1  TTTTTTTTGAGACTGCTCATTCTTTGTATCCTCTCCCTTTCCATGATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGAGACTGCTCATTCTTTGTATCCTCTCCCTTTCCATGATGGT  600

seq1  GTGTAGTTAAGACTGGCCTCAAAAATATTTAATAAGTGCCACCACATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTAAGACTGGCCTCAAAAATATTTAATAAGTGCCACCACATATG  650

seq1  ATTTTATGAGCAGTGGCCAGGCAGGCACTCTTACCAACTAAGCTTCGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGAGCAGTGGCCAGGCAGGCACTCTTACCAACTAAGCTTCGTCT  700

seq1  CACGCTCAGGGTGGTTCTCGACCTAGAACTGGGCCAGTGAACTTCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTCAGGGTGGTTCTCGACCTAGAACTGGGCCAGTGAACTTCTTGTT  750

seq1  GTTGCTGCTGTTATCTTTGTCTCTTTTTGGTTTATACAGGAGATTAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGCTGTTATCTTTGTCTCTTTTTGGTTTATACAGGAGATTAAAGA  800

seq1  GTCAA-TTTCCAGTCCAGAGCAACAACCTTTGAGAAAGTAGTACTTTTTG  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTTCCAGTCCAGAGCAACAACCTTTGAGAAAGTAGTACTTTTTG  850

seq1  AAGTATTAGACACCACTGACAAGACATTAAATGTGTTATCTTATGCTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTAGACACCACTGACAAGACATTAAATGTGTTATCTTATGCTTAA  900

seq1  AACTCTAAAATGTGCAGGTGTTAATGCCAATTT-GAAGGTTTCAATTAAC  948
      |||||| ||||||||||||| ||||| |||||| ||||||||||||||||
seq2  AACTCT-AAATGTGCAGGTG-TAATGGCAATTTGGAAGGTTTCAATTAAC  948

seq1  CAAAGGATTTTCTGTTATAGACTTCATCATTTAGTGTTAACCATTGTTAG  998
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  CAAAGGATTTTCTGTTATAGACTTCATCATTTAGTGGTAACCATGGTTAG  998

seq1  TCATTAAATTATA-GCCTCATTAACATGTCAGAATTTTTCATAAAAATAG  1047
      ||| |||| |||| |||||||| ||||||||| ||||||||| |||||||
seq2  TCA-TAAAATATAGGCCTCATT-ACATGTCAGGATTTTTCAT-AAAATAG  1045

seq1  GTTGACAGCT-TATTATTTTTTATTTTTCTAATCTGCTATAAGCTTAGTT  1096
      | |||||||| |||||         |||||||||||||   ||| |||||
seq2  G-TGACAGCTATATTA--------ATTTCTAATCTGCT---AGC-TAGTT  1082

seq1  ACATCTGCAACATTCTTTGGCAGTCTAGAACACACTAAAT  1136
      |||||||| ||||||||  ||||||| |||||  ||||||
seq2  ACATCTGC-ACATTCTT--GCAGTCT-GAACAACCTAAAT  1118


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