BAC Information

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BAC

Clone NameB6Ng01-255P18
Chromosome18 (Build37)
Map Location 59,703,512 - 59,810,747
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255P18.bB6Ng01-255P18.g
ACCGA062060GA062061
length1,0751,124
definitionB6Ng01-255P18.b B6Ng01-255P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,809,659 - 59,810,747)(59,703,512 - 59,704,642)
sequence
gaattccaaatacgccttttactccctaatgcatccttgcttgcaaacaa
acaaaacccacatctcttttatatattttaactaatactgatgagctaca
agtcaaaataaataaaatatcattcacagttgaacaaaattataaaatgt
ttaacaaaatttttgacagaatatatgcacgtgctggtcactgcaacacc
agaatatttcctagttaaataaaaggaagcctatgtaaggaaaaagacat
cctgttttcatggtcagagaacttaagattataagatgttaattttcctt
taattggcatgtagacttaatccaatccagaaaagaattcaaaatattta
taggacataaaaagaagatttcatgtttcatgtaaaagatgaaagaatat
agtactgaaaataatttcagaaaagagttactaaagtttaaaaaggggga
ctgacatcatgtgatattagtatttattgtcacagtgaagttgcctggct
atggtgtttgatgttaataagtaggctaccaaacagaatctacattctcc
aaatacatttgtacagatttgagaaagacatgggaggtgattccgcacta
ggacacttagataaccacaagcaaaagtgtgaacttcagtctatggcttg
catcatatatgtatatagacatggggatgctatgcctatgcataagcatg
agagatttctgaaagttagtataagggaaaatactgcagccttgggtcaa
agataacttctgtataaagccaaaaaaccgtggctttatgtaaaaaagaa
agtacaattattatttttaatctacaggttccaaatactcagatatagct
aacccactatatatttaaaaaacatttttacttttaaagtgtgaatgtgt
gtgagatacatatatctgtatggcacactcagaggctagaggagggtgct
agatgttttctgtcactctccgtcttgttacttttgaggtagatctttca
ctgaactgggagttcatgacttgagcgagctgtaccagccagctgattta
catctagcttgctccctgtgctagg
gaattcattgggtcataaatcacaagcttccttgttcttcctggtccttt
tgaagtatgtgctatcatcatcagagagagaagtttctctattcatagac
tgcaaggtttcataacatctataacataattgattgatgactagacgtta
ttttccttccttgtgtgtttcctatctatctgtaaaagctgtagcaactt
ctgtgtcctctccatcaggctatgcaagcactctactatgggggcctttg
cattcccagtgaaatgtgttctgagaccttggctggaaagcctgtgtttg
tttaatttgtctgacatcgacttgcaatctcctgtctatctgccagtaga
ttgcagtaataaatatgttaatttataataataaatatgtggataagtgt
gttgggcttctaattccatccctcatgcttgtaagttcctttcagttaaa
tgcttaacttaagctagcattcttctgtgcggccttatgtggtcaaatca
aactgtttttcttcccaaagacataaagtagaggtcaacggtttagatct
tcctatcacttctattttagttatcccattctcaattatttttaagaaga
aggaatcaacttacacaaggaatacttctatttaaaaaccctttcaattt
tttattgctatctttgaaaatttttgtttgccccaccctcttccctgact
gatagaccccattaagagatgagagtaagatccttttgcatctgaaaagt
cagaaaataatgggttctagggataatttccaaggagcctttcaaacaaa
taggatgctggagtagaggaacttcagcagaaaggagcgacatagcaaat
gtcagcacataacaggcatctcggtctaattgcagctaaagtcagctcta
ccaatgacacccttggcacttcctcaggccgctctgggaaggtgcaggtg
tctgcagcacaggttactaattttaatgtgttcaagtgtgtttttgtgac
agtggctacagagtgggagaagaaaaaacagtcttctgaatgcagaaaaa
atagacaatgtgttcgagtcttctgtgctgcttgtttcagttcctcagga
attcttctgacatatttataagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59809659_59810747
seq2: B6Ng01-255P18.b_49_1123 (reverse)

seq1  CCTAGCACCAAGGGGAGCAAAGGCTAGATGTTAAATCAAGGCTGGCTGGG  50
      ||||||||    ||||||||  |||||||| |||||||  ||||||| ||
seq2  CCTAGCAC---AGGGAGCAA--GCTAGATG-TAAATCA--GCTGGCT-GG  41

seq1  TACCAGCCTCGCTCAAAGTCATGAACTCCCAGTTCAGTGAAAGAATCTAC  100
      || ||| ||||||| |||||||||||||||||||||||||||| ||||||
seq2  TA-CAG-CTCGCTC-AAGTCATGAACTCCCAGTTCAGTGAAAG-ATCTAC  87

seq1  CTCAAAAAGTAACAAGACGGAGAGTGACAGAAAACATCTAGCACCCTCCT  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTC-AAAAGTAACAAGACGGAGAGTGACAGAAAACATCTAGCACCCTCCT  136

seq1  CTAGCCTCTGAGTGTGCCATACAGATATATGTATCTCACACACATTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTCTGAGTGTGCCATACAGATATATGTATCTCACACACATTCACA  186

seq1  CTTTAAAAGTAAAAATGTTTTTTAAATATATAGTGGGTTAGCTATATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAGTAAAAATGTTTTTTAAATATATAGTGGGTTAGCTATATCTG  236

seq1  AGTATTTGGAACCTGTAGATTAAAAATAATAATTGTACTTTCTTTTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGAACCTGTAGATTAAAAATAATAATTGTACTTTCTTTTTTAC  286

seq1  ATAAAGCCACGGTTTTTTGGCTTTATACAGAAGTTATCTTTGACCCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCACGGTTTTTTGGCTTTATACAGAAGTTATCTTTGACCCAAGG  336

seq1  CTGCAGTATTTTCCCTTATACTAACTTTCAGAAATCTCTCATGCTTATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTATTTTCCCTTATACTAACTTTCAGAAATCTCTCATGCTTATGC  386

seq1  ATAGGCATAGCATCCCCATGTCTATATACATATATGATGCAAGCCATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATAGCATCCCCATGTCTATATACATATATGATGCAAGCCATAGA  436

seq1  CTGAAGTTCACACTTTTGCTTGTGGTTATCTAAGTGTCCTAGTGCGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTCACACTTTTGCTTGTGGTTATCTAAGTGTCCTAGTGCGGAAT  486

seq1  CACCTCCCATGTCTTTCTCAAATCTGTACAAATGTATTTGGAGAATGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCATGTCTTTCTCAAATCTGTACAAATGTATTTGGAGAATGTAG  536

seq1  ATTCTGTTTGGTAGCCTACTTATTAACATCAAACACCATAGCCAGGCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTGGTAGCCTACTTATTAACATCAAACACCATAGCCAGGCAAC  586

seq1  TTCACTGTGACAATAAATACTAATATCACATGATGTCAGTCCCCCTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTGACAATAAATACTAATATCACATGATGTCAGTCCCCCTTTTT  636

seq1  AAACTTTAGTAACTCTTTTCTGAAATTATTTTCAGTACTATATTCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAGTAACTCTTTTCTGAAATTATTTTCAGTACTATATTCTTTCA  686

seq1  TCTTTTACATGAAACATGAAATCTTCTTTTTATGTCCTATAAATATTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACATGAAACATGAAATCTTCTTTTTATGTCCTATAAATATTTTG  736

seq1  AATTCTTTTCTGGATTGGATTAAGTCTACATGCCAATTAAAGGAAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTCTGGATTGGATTAAGTCTACATGCCAATTAAAGGAAAATTA  786

seq1  ACATCTTATAATCTTAAGTTCTCTGACCATGAAAACAGGATGTCTTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTATAATCTTAAGTTCTCTGACCATGAAAACAGGATGTCTTTTTC  836

seq1  CTTACATAGGCTTCCTTTTATTTAACTAGGAAATATTCTGGTGTTGCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATAGGCTTCCTTTTATTTAACTAGGAAATATTCTGGTGTTGCAGT  886

seq1  GACCAGCACGTGCATATATTCTGTCAAAAATTTTGTTAAACATTTTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCACGTGCATATATTCTGTCAAAAATTTTGTTAAACATTTTATAA  936

seq1  TTTTGTTCAACTGTGAATGATATTTTATTTATTTTGACTTGTAGCTCATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCAACTGTGAATGATATTTTATTTATTTTGACTTGTAGCTCATC  986

seq1  AGTATTAGTTAAAATATATAAAAGAGATGTGGGTTTTGTTTGTTTGCAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGTTAAAATATATAAAAGAGATGTGGGTTTTGTTTGTTTGCAAG  1036

seq1  CAAGGATGCATTAGGGAGTAAAAGGCGTATTTGGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGCATTAGGGAGTAAAAGGCGTATTTGGAATTC  1075

seq1: chr18_59703512_59704642
seq2: B6Ng01-255P18.g_66_1189

seq1  GAATTCATTGGGTCATAAATCACAAGCTTCCTTGTTCTTCCTGGTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGGTCATAAATCACAAGCTTCCTTGTTCTTCCTGGTCCTTT  50

seq1  TGAAGTATGTGCTATCATCATCAGAGAGAGAAGTTTCTCTATTCATAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTATGTGCTATCATCATCAGAGAGAGAAGTTTCTCTATTCATAGAC  100

seq1  TGCAAGGTTTCATAACATCTATAACATAATTGATTGATGACTAGACGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGTTTCATAACATCTATAACATAATTGATTGATGACTAGACGTTA  150

seq1  TTTTCCTTCCTTGTGTGTTTCCTATCTATCTGTAAAAGCTGTAGCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCCTTGTGTGTTTCCTATCTATCTGTAAAAGCTGTAGCAACTT  200

seq1  CTGTGTCCTCTCCATCAGGCTATGCAAGCACTCTACTATGGGGGCCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCTCTCCATCAGGCTATGCAAGCACTCTACTATGGGGGCCTTTG  250

seq1  CATTCCCAGTGAAATGTGTTCTGAGACCTTGGCTGGAAAGCCTGTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCAGTGAAATGTGTTCTGAGACCTTGGCTGGAAAGCCTGTGTTTG  300

seq1  TTTAATTTGTCTGACATCGACTTGCAATCTCCTGTCTATCTGCCAGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTGTCTGACATCGACTTGCAATCTCCTGTCTATCTGCCAGTAGA  350

seq1  TTGCAGTAATAAATATGTTAATTTATAATAATAAATATGTGGATAAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTAATAAATATGTTAATTTATAATAATAAATATGTGGATAAGTGT  400

seq1  GTTGGGCTTCTAATTCCATCCCTCATGCTTGTAAGTTCCTTTCAGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCTTCTAATTCCATCCCTCATGCTTGTAAGTTCCTTTCAGTTAAA  450

seq1  TGCTTAACTTAAGCTAGCATTCTTCTGTGCGGCCTTATGTGGTCAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAACTTAAGCTAGCATTCTTCTGTGCGGCCTTATGTGGTCAAATCA  500

seq1  AACTGTTTTTCTTCCCAAAGACATAAAGTAGAGGTCAACGGTTTAGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTTTTCTTCCCAAAGACATAAAGTAGAGGTCAACGGTTTAGATCT  550

seq1  TCCTATCACTTCTATTTTAGTTATCCCATTCTCAATTATTTTTAAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCACTTCTATTTTAGTTATCCCATTCTCAATTATTTTTAAGAAGA  600

seq1  AGGAATCAACTTACACAAGGAATACTTCTATTTAAAAACCCTTTCAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAACTTACACAAGGAATACTTCTATTTAAAAACCCTTTCAATTT  650

seq1  TTTATTGCTATCTTTGAAAATTTTTGTTTGCCCCACCCTCTTCCCTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTATCTTTGAAAATTTTTGTTTGCCCCACCCTCTTCCCTGACT  700

seq1  GATAGACCCCATTAAGAGATGAGAGTAAGATCCTTTTGCATCTGAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACCCCATTAAGAGATGAGAGTAAGATCCTTTTGCATCTGAAAAGT  750

seq1  CAGAAAATAATGGGTTCTAGGGATAATTTCCAAGGAGCCTTTCAAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATAATGGGTTCTAGGGATAATTTCCAAGGAGCCTTTCAAACAAA  800

seq1  TAGGATGCTGGAGTAGAGGAACTTCAGCAGAAAGGAGCGACATAGCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGCTGGAGTAGAGGAACTTCAGCAGAAAGGAGCGACATAGCAAAT  850

seq1  GTCAGCACAAAACAGGCATCTCGGTCTAATTGCAGCTAAAGTCAGCTCTA  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCACATAACAGGCATCTCGGTCTAATTGCAGCTAAAGTCAGCTCTA  900

seq1  CCAATGACACCCTTGGCACTTCCTCAGGCCGCTCT-GGAAGGTGCAGGGT  949
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  CCAATGACACCCTTGGCACTTCCTCAGGCCGCTCTGGGAAGGTGCA-GGT  949

seq1  GTCTGCAGCACAGGTTACTAATTTTAATGTGTTCAAGTGTGTTTTTGTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGCACAGGTTACTAATTTTAATGTGTTCAAGTGTGTTTTTGTGA  999

seq1  CAGTTGGCTACAGAGGTGGGAGA--GAAAAACAGTC-TCTGAATGCAG-A  1045
      ||| |||||||||| ||||||||   |||||||||| ||||||||||| |
seq2  CAG-TGGCTACAGA-GTGGGAGAAGAAAAAACAGTCTTCTGAATGCAGAA  1047

seq1  AAAATAGACAAATGTGTTCGGAGGTCTTCCTGTGGCTGCCTG-TTCAGTG  1094
      ||||||||| ||||||||||   ||||| |||| ||||| || |||||| 
seq2  AAAATAGAC-AATGTGTTCG--AGTCTT-CTGT-GCTGCTTGTTTCAGT-  1091

seq1  TCCTCAAGGAAATTCTTCCTGACAATAATTATAAGAA  1131
      ||||||  | ||||||| ||||| ||| |||||||||
seq2  TCCTCA--GGAATTCTT-CTGAC-ATATTTATAAGAA  1124