BAC Information

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BAC

Clone NameB6Ng01-256F04
Chromosome18 (Build37)17 (Build37)
Map Location 30,314,692 - 30,314,97367,416,924 - 67,418,079
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040930, 4930578E11Rik, LOC666073
Downstream genePik3c3, LOC666094, LOC666100, EG666111, EG666114, LOC433168, Rit2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256F04.bB6Ng01-256F04.g
ACCGA062312GA062313
length4331,163
definitionB6Ng01-256F04.b B6Ng01-256F04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,314,692 - 30,314,973)(67,416,924 - 67,418,079)
sequence
taagtcaaataaccccttttcttcctctgttgctttttttttttcctggg
cattttatcacagctataaaaataaaatgaggacgggcaggatccatact
taaagctgcagttacaaaatcaaggttaagagggagggagggagggaagg
aaaaaataaattacagtatttagaaccagaaggcaccttgagatgtcttt
attcctaaactaacctacacaaagaaaagctgcatgagtcaggtctgaag
ttccaaatcacagcatggtgagaatttgctggaatacttgacatgcgtta
tgagatagctactgagcatttgctaaatatacatagacaagaacttcccc
tcatgtgtgcatacacagagacatatatgcacacagacattctttcaaac
acatatacacatgtaaacatacacatacaaaca
gaattcaaatgttcaagggcacgtgacttagacatttggtaatgctgttg
gctaaattgtaaaaatacaaattaataagtaaaacctgctgagttagcag
catgagtttgataaactatggtaggattccagttcgtctgatgtcatatt
tgatagatacttaagattgtaaaaaataaacttgatttaaatcagcaagt
cattctgacaacttctatttcatgaatttattttttgtaaatttgcctaa
tgtagcttccagaatcttcttggtggctaagtaaaatgaaatatttgagt
gtctatatatctggcttcttactctcccaagaatattacatatatttgga
tctgttgataaatatattcttttgacacataactgattttgttactacaa
acacacatcgctcctgggtacaaaaatggtgcattcataacatgtattgg
catatggaatgctgacatatgtgaacacagttgccacatatctattattt
agtaatcattgtaaaataagagttactaatagctaaaagttataaccatt
acatatatacacggaaatagcagatgacgggaagcagctttgaaagatat
tcaagggggaaataagtgtgtttcattagagaaaagagactaattctatc
ctaagatagaatgaatgctttaaaaaaaacacattatagaagggagtgaa
aagaggactttatacagaaacacttaagtggatttgagaaattacaaatg
attttgggggaaatgattttgactgaatttgatgggatttatttaggaat
gtattttaagataagctacggcatgaacagtacacactgtaaatgggtgt
gaatgcctgactgcttttctttctacaaacaacaacaacaaaatgtttta
ttgtcgtgctcataataaaaaaagaaaatcagatagaaatgggatagttt
catcttttaagtaaccacttataaaatcaagtagtttacatcatatagat
tagctgcatgtcttgtttgtcctggactgtttagggaactgggattcttt
ccaatactagaagctatgggagggtccactctctcatccattggctactc
atatccatccttcccaccctcttctggcctgcctgacccatcacttctct
ctctccattttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_30314692_30314973
seq2: B6Ng01-256F04.b_202_483

seq1  AAAAATAAATTACAGTATTTAGAACCAGAAGGCACCTTGAGATGTCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATTACAGTATTTAGAACCAGAAGGCACCTTGAGATGTCTTTA  50

seq1  TTCCTAAACTAACCTACACAAAGAAAAGCTGCATGAGTCAGGTCTGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAACTAACCTACACAAAGAAAAGCTGCATGAGTCAGGTCTGAAGT  100

seq1  TCCAAATCACAGCATGGTGAGAATTTGCTGGAATACTTGACATGCGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCACAGCATGGTGAGAATTTGCTGGAATACTTGACATGCGTTAT  150

seq1  GAGATAGCTACTGAGCATTTGCTAAATATACATAGACAAGAACTTCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGCTACTGAGCATTTGCTAAATATACATAGACAAGAACTTCCCCT  200

seq1  CATGTGTGCATACACAGAGACATATATGCACACAGACATTCTTTCAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGCATACACAGAGACATATATGCACACAGACATTCTTTCAAACA  250

seq1  CATATACACATGTAAACATACACATACAAACA  282
      ||||||||||||||||||||||||||||||||
seq2  CATATACACATGTAAACATACACATACAAACA  282

seq1: chr17_67416924_67418079
seq2: B6Ng01-256F04.g_64_1226

seq1  GAATTCAAATGTTCAAGGGCACGTGACTTAGACATTTGGTAATGCTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTTCAAGGGCACGTGACTTAGACATTTGGTAATGCTGTTG  50

seq1  GCTAAATTGTAAAAATACAAATTAATAAGTAAAACCTGCTGAGTTAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATTGTAAAAATACAAATTAATAAGTAAAACCTGCTGAGTTAGCAG  100

seq1  CATGAGTTTGATAAACTATGGTAGGATTCCAGTTCGTCTGATGTCATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTTGATAAACTATGGTAGGATTCCAGTTCGTCTGATGTCATATT  150

seq1  TGATAGATACTTAAGATTGTAAAAAATAAACTTGATTTAAATCAGCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATACTTAAGATTGTAAAAAATAAACTTGATTTAAATCAGCAAGT  200

seq1  CATTCTGACAACTTCTATTTCATGAATTTATTTTTTGTAAATTTGCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGACAACTTCTATTTCATGAATTTATTTTTTGTAAATTTGCCTAA  250

seq1  TGTAGCTTCCAGAATCTTCTTGGTGGCTAAGTAAAATGAAATATTTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTCCAGAATCTTCTTGGTGGCTAAGTAAAATGAAATATTTGAGT  300

seq1  GTCTATATATCTGGCTTCTTACTCTCCCAAGAATATTACATATATTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATATATCTGGCTTCTTACTCTCCCAAGAATATTACATATATTTGGA  350

seq1  TCTGTTGATAAATATATTCTTTTGACACATAACTGATTTTGTTACTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGATAAATATATTCTTTTGACACATAACTGATTTTGTTACTACAA  400

seq1  ACACACATCGCTCCTGGGTACAAAAATGGTGCATTCATAACATGTATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATCGCTCCTGGGTACAAAAATGGTGCATTCATAACATGTATTGG  450

seq1  CATATGGAATGCTGACATATGTGAACACAGTTGCCACATATCTATTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGAATGCTGACATATGTGAACACAGTTGCCACATATCTATTATTT  500

seq1  AGTAATCATTGTAAAATAAGAGTTACTAATAGCTAAAAGTTATAACCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCATTGTAAAATAAGAGTTACTAATAGCTAAAAGTTATAACCATT  550

seq1  ACATATATACACGGAAATAGCAGATGACGGGAAGCAGCTTTGAAAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATACACGGAAATAGCAGATGACGGGAAGCAGCTTTGAAAGATAT  600

seq1  TCAAGGGGGAAATAAGTGTGTTTCATTAGAGAAAAGAGACTAATTCTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGGGAAATAAGTGTGTTTCATTAGAGAAAAGAGACTAATTCTATC  650

seq1  CTAAGATAGAATGAATGCTTTAAAAAAAACACATTATAGAAGGGAGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATAGAATGAATGCTTTAAAAAAAACACATTATAGAAGGGAGTGAA  700

seq1  AAGAGGACTTTATACAGAAACACTTAAGTGGATTTGAGAAATTACAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACTTTATACAGAAACACTTAAGTGGATTTGAGAAATTACAAATG  750

seq1  ATTTTGGGGGAAATGATTTTGACTGAATTTGATGGGATTTATTTAGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGGGAAATGATTTTGACTGAATTTGATGGGATTTATTTAGGAAT  800

seq1  GTATTTTAAGATAAGCTACGGCATGAACAGTACACACTGTAAATGGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAGATAAGCTACGGCATGAACAGTACACACTGTAAATGGGTGT  850

seq1  GAATGCCTGACTGCTTTTCTTTCTACAAACAACAACAACAAAATGTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCTGACTGCTTTTCTTTCTACAAACAACAACAACAAAATGTTTTA  900

seq1  TTGTCGTGCTCATAATAAAAAAAGAAAATCAGATAGAAATGGGATAGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTGCTCATAATAAAAAAAGAAAATCAGATAGAAATGGGATAGTTT  950

seq1  CATCTTTTAAGTAACCACTTATAAAAATCAGGTAGTTTACATCATATAAG  1000
      |||||||||||||||||||||| ||||||| |||||||||||||||| ||
seq2  CATCTTTTAAGTAACCACTTAT-AAAATCAAGTAGTTTACATCATAT-AG  998

seq1  ATTAGCTGCATGTCTTGTTTGTCCTGGACTGTGTAGGGAACTGG--ATCT  1048
      |||||||||||||||||||||||||||||||| |||||||||||   |||
seq2  ATTAGCTGCATGTCTTGTTTGTCCTGGACTGTTTAGGGAACTGGGATTCT  1048

seq1  TTTCAATACTAAGAGCTAAGGGGAGGGGTCA--CTCTCATCCA-TGGTAC  1095
      || ||||||||  |||| | |||||||  ||  |||||||||| |||   
seq2  TTCCAATACTAGAAGCT-ATGGGAGGGTCCACTCTCTCATCCATTGGCTA  1097

seq1  CTCATATTCATCCCTCC--ACCTCTTCT-GCCTGCCTGCTCTTCCACT--  1140
      ||||||| ||||| |||   |||||||| |||||||||  |   ||||  
seq2  CTCATATCCATCCTTCCCACCCTCTTCTGGCCTGCCTGACCCATCACTTC  1147

seq1  TCTCTCTCCCTTTTCC  1156
      ||||||||| ||||||
seq2  TCTCTCTCCATTTTCC  1163