BAC Information

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BAC

Clone NameB6Ng01-258L16
Chromosome18 (Build37)
Map Location 44,800,435 - 44,800,714
singlet/doubletsinglet
Overlap genenone
Upstream geneJakmip2, Spink3, Scgb3a2, Gm94, Spink5, EG433178, LOC666969, EG433180, Spink12, LOC100042855, 9530002K18Rik, Spink11, Npy6r, Myot, Dcp2, Mcc
Downstream geneLOC100042883, Ythdc2, LOC626309, LOC225457, LOC100042900, Kcnn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258L16.bB6Ng01-258L16.g
ACCGA064092GA064093
length1,198280
definitionB6Ng01-258L16.b B6Ng01-258L16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaactcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttttcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggatgtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaacacaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtgggaagaaagacagcattttcaacaattggtgctg
gcacaactgggttgttatcgtgtagaaggatgcgaatcgatccaatactt
atctcctgtactaaggtcaaatctaagtggatcaaggacttcacataaaa
accagagacacctgaaactatagagaaaaagtgggaaaggctgaagaatt
gggcacaggaaatcctgaccggacagccattgctggcctgtaagatcgaa
tgacaatgacaatggacttcaggtctggcagcaaaaggactaccgtca
tttattttccttcccactccaaaaagttctccagtgtccccttcagcaca
ggacaccaggacaagttgagtggatttggaggtttctttatcttcctcta
tattcgcctgtatctgtttcctaaggattccccaacagtaaaacacagca
atgagcagccacaactttgttcccaacttcttgctccacttctacagttg
ctgtgcttagtcgcctcaagaattgggtgccacctgattaatggtgtgtg
tgtgtgtgtgtgagagagagagaggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_44800435_44800714
seq2: B6Ng01-258L16.g_72_351 (reverse)

seq1  CCCCTCCTCTCTCTCTCTCACACACACACACACACACCATTAATCAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTCTCTCTCTCTCACACACACACACACACACCATTAATCAGGTG  50

seq1  GCACCCAATTCTTGAGGCGACTAAGCACAGCAACTGTAGAAGTGGAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCAATTCTTGAGGCGACTAAGCACAGCAACTGTAGAAGTGGAGCAA  100

seq1  GAAGTTGGGAACAAAGTTGTGGCTGCTCATTGCTGTGTTTTACTGTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGGAACAAAGTTGTGGCTGCTCATTGCTGTGTTTTACTGTTGGG  150

seq1  GAATCCTTAGGAAACAGATACAGGCGAATATAGAGGAAGATAAAGAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTAGGAAACAGATACAGGCGAATATAGAGGAAGATAAAGAAACC  200

seq1  TCCAAATCCACTCAACTTGTCCTGGTGTCCTGTGCTGAAGGGGACACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCCACTCAACTTGTCCTGGTGTCCTGTGCTGAAGGGGACACTGG  250

seq1  AGAACTTTTTGGAGTGGGAAGGAAAATAAA  280
      ||||||||||||||||||||||||||||||
seq2  AGAACTTTTTGGAGTGGGAAGGAAAATAAA  280