BAC Information

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BAC

Clone NameB6Ng01-259D13
Chromosome18 (Build37)
Map Location 56,344,085 - 56,344,313
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
Downstream geneLOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259D13.bB6Ng01-259D13.g
ACCGA064458GA064459
length832976
definitionB6Ng01-259D13.b B6Ng01-259D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgacggcgagatactagctcgggcgagaattgagtacaaagtt
gttcagtttccacaagagtgtatgttttcctgtgtttctattgttgttga
aatccatctttaattcatggtgatctgataggacacaggcattacttcat
tatctagtatctgttgaggctcactttgtgattgtaaactttggagaagg
atccaagaggtgctgagaaacagtatattcttttgtgtttgtgtgaaaag
ttctgtgcatgtctattaagtccttttgattcataacatcagttaatttc
attatttctctgtttagtttttgccctgatgagctgttgagagtctggtg
ttgaagtctctgactattaatgtatggggtttgatgtgttatttaagctt
tagcaatgtctcttttacaaagtgggtgcccttgtgtttgggccatagga
ttcagaatagaaatatcatcttggtggatttttcttttgattagtatgta
atgttcttccctatctcttctgattaattttgattaaaagtctattttac
tgaatattagaatggttatgccagcttgcttcttgagtccattagcttgg
aaaccctttccagccctttactttgaggaattgtttatctctgttgctga
gatatgtgttttgtatgcagcagaatgatggatcctgtttatgaatccac
tctgttagcctgtgtctttttattgggggaattgagtccatttatattta
gagatattaattaccaataatttttagtttttgttattttgatgttgctg
atgttagtgtgtgtgtgtgtgtgtgtgtgggg
gaattcagagactatatgcacaagtcctatttaagatctagacagccaaa
atttggcaactgaaggctactagagaagagaaggccagttttccttagga
atatggttcaagatgtacactgtatgtgtaccactgacagaccagtagat
gatcctacaataatgtgcacgtcatgtagtctaaaatatgattggaactc
attcagaaatctcaatgtacttatgaggtcaagtcaataaaaactgtaaa
gattttcttgattccttcaaaggttttactaaatcaatgctgtgaagcag
agatcatggccttttttttttaataaaataaatttgagttctgtttcagt
ggtaaagtagtcaccttggtcaatgttctcttgctgtgaatagacatacc
atgaccatggcacctcttacaaaataaagcatttaaattggggcttgttc
caagtttcagtggtggggaacatggcagcacataggtagacatggtgctg
gtaaagttgctgagaattctacatccagattcacaggcaacaagaaaata
cagtgatgttgggcctggttttcctcttgaaaactactcttagatactca
gtttcactaacggggccaaaccttgtaaccttacccaagcagggccactc
cctcctaactaagcattaaaatatattaacctatgagctccattttcatt
caaatcactacagaggtagaaagtaaaataatggatggatcacagggctc
ccaatggaggagctagagaaagtacccaaggagctaaagggatctgcaac
cctataggtggaacaacattatgaactaaccagtaccccggagctcttga
ctctagctgcatatgtatcaaaaaatggcctagtcggccatcactggaaa
gagaggcccattggacacgcaaactttatatgccccagtacagggacgcc
agggccaaaaagggggagtgggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56344085_56344313
seq2: B6Ng01-259D13.g_815_1041 (reverse)

seq1  CCCACCCACTCCCCCTATTTGGCCCTGGCGTTCCCCTGTACTGGGGCATA  50
      |||||||||||||||| ||||||||||||||  |||||||||||||||||
seq2  CCCACCCACTCCCCCTTTTTGGCCCTGGCGT--CCCTGTACTGGGGCATA  48

seq1  TAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCTGACTAAG  100
      ||||||||||  ||||||||||||||||||| |||||||||| ||||| |
seq2  TAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGG  98

seq1  CCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTGGT  150
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCATTTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGT  148

seq1  TAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCT  200
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCT  198

seq1  TGGGTAATTTCTCTAGCTCCTCCATTGGG  229
      |||||| ||||||||||||||||||||||
seq2  TGGGTACTTTCTCTAGCTCCTCCATTGGG  227