BAC Information

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BAC

Clone NameB6Ng01-259E09
Chromosome18 (Build37)
Map Location 14,383,050 - 14,384,597
singlet/doubletdoublet
Overlap geneLOC100040103
Upstream geneLOC665379, LOC100040358, Zfp521, LOC100040094
Downstream geneLOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259E09.bB6Ng01-259E09.g
ACCGA064496GA064497
length1,023946
definitionB6Ng01-259E09.b B6Ng01-259E09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,383,050 - 14,383,701)(14,384,066 - 14,384,597)
sequence
gaattcatccaggatattagtatgaagctatctagccttttaccaacaca
ggcattgaggtaatcccaatctcagaagatggttttcaaatgctgccaat
aatgatgctgctcttcttgtgatttattttcatgttcaatgatatgaaca
ggggagtgcgtgtttgtgcatgtgtgtatgcacatgcacacagtggccag
gaaaggggtcccctggagctggagttgcaggtgaaagagcagtaactatt
cttaccagctgagccatctctcctcccacctctgatattgttcttaaata
tttagtacaattcaccagtgcagcctccatatcttaggcttttcttgttt
tgaaaagtttttttggggttttggaaggcaaaggagtagtttctgaatac
tgattctaactcttactaaccaaagcttctatttcttcatggtcagtcct
caggaagttcttcctgcttgtctaggttatctaatgtgttggttcataat
ttttataacagtctcttacaattctttttatttttatgattccagctgta
atatccttctagtctgctctttgttacttaaacctctctcttctttaccc
aaataatcctgtgagattttgtgattttttttagcttttcacaaaaatat
ttaatgttaacaattattttgttttctccttcctctatctctcctctaac
ctaaccattccctcttcctgttagttagaatttgcttcattctctttcct
tgttcccgcaatctctgttaggagatatttctttttttttttttttaatg
tatgaattgctcctagaagcttttgttgtatctactacacttcagtggaa
tctgtgcttttttttttttttagattgtattttctctaaagatatttcct
gttctttctttgattattttgactggttattcaacagtgttgttgaactt
ttaccacatgtatgaatttttaatttttctcattgctactgatttttttt
aaatttccctgcattggtgacca
cggaattaacccaacctattgtgactggagaaatcccaaggaagcaggct
gagcaagtcaagaagagcaagccagtaagcagcactcctcggggactctg
catcagctcctgcctccaggttcctacccaatttgaatttctgccttggc
atgtttcctttagtggactgacatttaggatatataagccaatttaaccc
tttcctccccagcatatatatatatatatatatatatatatatatatata
tatatatcactcagtattagactacatgaatacacatgaagtaatcactc
atgtaactgagaagagacatggtcagtagcacaattggagaggatcccaa
taccttgctttcagtaataaatagaaaatcaacgaggaaaagaacccttg
agtaatactgaggaccatgtggcctttaacaacagagggatgagtgtcct
taggtgtttccatggcatccatacgttaggtcataaaatagcctttaagg
agtttgttgaactgctatcaaatacattttctggtcacaatgcaggaaat
ttaaaaaaaatcagtagcaatgagaaaaattaaaaattcatacatgtgtt
aaagttcaacaacactgttgaataaccagtcaaaataatcaaagaaagaa
caggaaatatctttagagaaaatacaatctaaaaaaaaaaaaaagcacag
attccactgaagtgtagtagatacaacaaaagcttctaggagcaattcat
acattaaaaaaaaaaaaaaaagaaatatctcctaacagagattgcgggaa
caaggaaagagaatgaagcaaattctaactaacaggaagagggaatggtt
aggttagaggagagatagaggaaggagaaaacaaaatattgttaacttaa
tatttttgtgaaaagctaaaaaaatcacaaaatctcacaggattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14383050_14383701
seq2: B6Ng01-259E09.b_42_693

seq1  GAATTCATCCAGGATATTAGTATGAAGCTATCTAGCCTTTTACCAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCAGGATATTAGTATGAAGCTATCTAGCCTTTTACCAACACA  50

seq1  GGCATTGAGGTAATCCCAATCTCAGAAGATGGTTTTCAAATGCTGCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGAGGTAATCCCAATCTCAGAAGATGGTTTTCAAATGCTGCCAAT  100

seq1  AATGATGCTGCTCTTCTTGTGATTTATTTTCATGTTCAATGATATGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCTGCTCTTCTTGTGATTTATTTTCATGTTCAATGATATGAACA  150

seq1  GGGGAGTGCGTGTTTGTGCATGTGTGTATGCACATGCACACAGTGGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTGCGTGTTTGTGCATGTGTGTATGCACATGCACACAGTGGCCAG  200

seq1  GAAAGGGGTCCCCTGGAGCTGGAGTTGCAGGTGAAAGAGCAGTAACTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGTCCCCTGGAGCTGGAGTTGCAGGTGAAAGAGCAGTAACTATT  250

seq1  CTTACCAGCTGAGCCATCTCTCCTCCCACCTCTGATATTGTTCTTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAGCTGAGCCATCTCTCCTCCCACCTCTGATATTGTTCTTAAATA  300

seq1  TTTAGTACAATTCACCAGTGCAGCCTCCATATCTTAGGCTTTTCTTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACAATTCACCAGTGCAGCCTCCATATCTTAGGCTTTTCTTGTTT  350

seq1  TGAAAAGTTTTTTTGGGGTTTTGGAAGGCAAAGGAGTAGTTTCTGAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTTTTTTTGGGGTTTTGGAAGGCAAAGGAGTAGTTTCTGAATAC  400

seq1  TGATTCTAACTCTTACTAACCAAAGCTTCTATTTCTTCATGGTCAGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTAACTCTTACTAACCAAAGCTTCTATTTCTTCATGGTCAGTCCT  450

seq1  CAGGAAGTTCTTCCTGCTTGTCTAGGTTATCTAATGTGTTGGTTCATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTTCTTCCTGCTTGTCTAGGTTATCTAATGTGTTGGTTCATAAT  500

seq1  TTTTATAACAGTCTCTTACAATTCTTTTTATTTTTATGATTCCAGCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACAGTCTCTTACAATTCTTTTTATTTTTATGATTCCAGCTGTA  550

seq1  ATATCCTTCTAGTCTGCTCTTTGTTACTTAAACCTCTCTCTTCTTTACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTTCTAGTCTGCTCTTTGTTACTTAAACCTCTCTCTTCTTTACCC  600

seq1  AAATAATCCTGTGAGATTTTGTGATTTTTTTTAGCTTTTCACAAAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCTGTGAGATTTTGTGATTTTTTTTAGCTTTTCACAAAAATAT  650

seq1  TT  652
      ||
seq2  TT  652

seq1: chr18_14384066_14384597
seq2: B6Ng01-259E09.g_70_601 (reverse)

seq1  ACCAGAAAATGTATTTGATAGCAGTTCAACAAACTCCTTAAAGGCTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAATGTATTTGATAGCAGTTCAACAAACTCCTTAAAGGCTATTT  50

seq1  TATGACCTAACGTATGGATGCCATGGAAACACCTAAGGACACTCATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCTAACGTATGGATGCCATGGAAACACCTAAGGACACTCATCCCT  100

seq1  CTGTTGTTAAAGGCCACATGGTCCTCAGTATTACTCAAGGGTTCTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTAAAGGCCACATGGTCCTCAGTATTACTCAAGGGTTCTTTTCC  150

seq1  TCGTTGATTTTCTATTTATTACTGAAAGCAAGGTATTGGGATCCTCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGATTTTCTATTTATTACTGAAAGCAAGGTATTGGGATCCTCTCCA  200

seq1  ATTGTGCTACTGACCATGTCTCTTCTCAGTTACATGAGTGATTACTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCTACTGACCATGTCTCTTCTCAGTTACATGAGTGATTACTTCAT  250

seq1  GTGTATTCATGTAGTCTAATACTGAGTGATATATATATATATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCATGTAGTCTAATACTGAGTGATATATATATATATATATATAT  300

seq1  ATATATATATATATATATATATGCTGGGGAGGAAAGGGTTAAATTGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATGCTGGGGAGGAAAGGGTTAAATTGGCTT  350

seq1  ATATATCCTAAATGTCAGTCCACTAAAGGAAACATGCCAAGGCAGAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCTAAATGTCAGTCCACTAAAGGAAACATGCCAAGGCAGAAATT  400

seq1  CAAATTGGGTAGGAACCTGGAGGCAGGAGCTGATGCAGAGTCCCCGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGGGTAGGAACCTGGAGGCAGGAGCTGATGCAGAGTCCCCGAGGA  450

seq1  GTGCTGCTTACTGGCTTGCTCTTCTTGACTTGCTCAGCCTGCTTCCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCTTACTGGCTTGCTCTTCTTGACTTGCTCAGCCTGCTTCCTTGG  500

seq1  GATTTCTCCAGTCACAATAGGTTGGGTTAATT  532
      ||||||||||||||||||||||||||||||||
seq2  GATTTCTCCAGTCACAATAGGTTGGGTTAATT  532