BAC Information

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BAC

Clone NameB6Ng01-260M14
Chromosome18 (Build37)
Map Location 73,980,283 - 73,981,132
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043411, LOC100042955, Rkhd2, Smad4, Elac1, Me2
Downstream geneMro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260M14.bB6Ng01-260M14.g
ACCGA065623GA065624
length8511,186
definitionB6Ng01-260M14.b B6Ng01-260M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattccagttggccataaacaggcggagagagatctctccgttc
tattggaggctccaacagcaatgaggaaacaggtcaggaagacagtaggc
ctacaccagagtgcattcactttacaaggaacaattcattaacgtgagtt
actttatgtaggtatcagggtagatataaaagtcatgcagaggggtgtgt
atagaaagctcatttcaataagtccacatctgaatagctgttgcccagcc
tgagctagcttcccgagatttcttttacatctttcagtgagctgatgtta
aatgtaacacctcactactgacctctatcagcagagtattaagactaaat
cttaaagctcgacgagtcggatatttctatgctgagaaaagcatgtaaaa
tatcaaaatagttgtttctcattcacagtaaacttagctttttcagcatt
ataataagcagtctggggatagtgcagtcctggagacccgcacaacagga
gataaccatacctgtgcatataaacatgaagccaatatgtaatctattta
atcccagtaagtacaaagaactgcctgtcgcctttcctcgctttcatgca
ctgggacaaagatagccttaaaaaaaattatacaaatggacaaggccttg
ggcttgaggatttggaaacctttggattcagaaaaatatgaggtgtgtat
tgtgcatgtcatgtaatactcacaatggggtctggggctagacctcgaaa
aatgcattcgcagttttcaattttttttttttactgcatgtatgcattgt
gtgtgtgagtgtgtatgtgtttgtgtcagtgtgtatgtgtgtgtatgtgt
c
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccatttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
ctttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttct
tgaagcactcatagcttatgagtttccctcttagaaatgctttcattgtg
tcccaagtttaggtacgtttgtgcttcattttcattaaactctaaaagtc
ttaaatttctttctttatcttctttgacagtatcaattgagaagagggtt
gttcagtcatgtgaatgttggccttccgtattattgtcatgagatcgcct
aatgcagtgggacctgagaggacactggggacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73980283_73981132
seq2: B6Ng01-260M14.b_47_897 (reverse)

seq1  GACACATACACACACATACACACTGACACAAACACATACACACTCACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATACACACACATACACACTGACACAAACACATACACACTCACACA  50

seq1  CACAATGCATACATGCAGT-AAAAAAAAAAATTGAAAACTGCGAATGCAT  99
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CACAATGCATACATGCAGTAAAAAAAAAAAATTGAAAACTGCGAATGCAT  100

seq1  TTTTCGAGGTCTAGCCCCAGACCCCATTGTGAGTATTACATGACATGCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGAGGTCTAGCCCCAGACCCCATTGTGAGTATTACATGACATGCAC  150

seq1  AATACACACCTCATATTTTTCTGAATCCAAAGGTTTCCAAATCCTCAAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACACCTCATATTTTTCTGAATCCAAAGGTTTCCAAATCCTCAAGC  200

seq1  CCAAGGCCTTGTCCATTTGTATAATTTTTTTTAAGGCTATCTTTGTCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCCTTGTCCATTTGTATAATTTTTTTTAAGGCTATCTTTGTCCCA  250

seq1  GTGCATGAAAGCGAGGAAAGGCGACAGGCAGTTCTTTGTACTTACTGGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGAAAGCGAGGAAAGGCGACAGGCAGTTCTTTGTACTTACTGGGA  300

seq1  TTAAATAGATTACATATTGGCTTCATGTTTATATGCACAGGTATGGTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGATTACATATTGGCTTCATGTTTATATGCACAGGTATGGTTAT  350

seq1  CTCCTGTTGTGCGGGTCTCCAGGACTGCACTATCCCCAGACTGCTTATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTGTGCGGGTCTCCAGGACTGCACTATCCCCAGACTGCTTATTA  400

seq1  TAATGCTGAAAAAGCTAAGTTTACTGTGAATGAGAAACAACTATTTTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGAAAAAGCTAAGTTTACTGTGAATGAGAAACAACTATTTTGAT  450

seq1  ATTTTACATGCTTTTCTCAGCATAGAAATATCCGACTCGTCGAGCTTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACATGCTTTTCTCAGCATAGAAATATCCGACTCGTCGAGCTTTAA  500

seq1  GATTTAGTCTTAATACTCTGCTGATAGAGGTCAGTAGTGAGGTGTTACAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTCTTAATACTCTGCTGATAGAGGTCAGTAGTGAGGTGTTACAT  550

seq1  TTAACATCAGCTCACTGAAAGATGTAAAAGAAATCTCGGGAAGCTAGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCAGCTCACTGAAAGATGTAAAAGAAATCTCGGGAAGCTAGCTC  600

seq1  AGGCTGGGCAACAGCTATTCAGATGTGGACTTATTGAAATGAGCTTTCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGCAACAGCTATTCAGATGTGGACTTATTGAAATGAGCTTTCTA  650

seq1  TACACACCCCTCTGCATGACTTTTATATCTACCCTGATACCTACATAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCCCTCTGCATGACTTTTATATCTACCCTGATACCTACATAAAG  700

seq1  TAACTCACGTTAATGAATTGTTCCTTGTAAAGTGAATGCACTCTGGTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACGTTAATGAATTGTTCCTTGTAAAGTGAATGCACTCTGGTGTA  750

seq1  GGCCTACTGTCTTCCTGACCTGTTTCCTCATTGCTGTTGGAGCCTCCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTACTGTCTTCCTGACCTGTTTCCTCATTGCTGTTGGAGCCTCCAAT  800

seq1  AGAACGGAGAGATCTCTCTCCGCCTGTTTATGGCCAACTGGAATGGAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGGAGAGATCTCTCTCCGCCTGTTTATGGCCAACTGGAATGGAATT  850

seq1  C  850
      |
seq2  C  851