BAC Information

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BAC

Clone NameB6Ng01-262F19
Chromosome18 (Build37)
Map Location 90,290,410 - 90,291,475
singlet/doubletsinglet
Overlap genenone
Upstream geneRttn, Cd226, Dok6, LOC383320, LOC620693
Downstream geneEif3s6-ps2, LOC665526, Txndc10, LOC666779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F19.bB6Ng01-262F19.g
ACCGA066800GA066801
length2301,065
definitionB6Ng01-262F19.b B6Ng01-262F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcgtttagctatgtaccccatttttaaataggtggttctagatacatat
ataacagatggatttatctggcatcaaagagagggtaggctcttggttct
gtgaaggtttaatgccccagtgtagggggatgctagagcagtgagacagg
agtgggtgagtgggtggaggagcactttcatagaggcaaaggggctgggg
gagaaggaagatgggatggaggaattgtgg

gaattctgtctcagattttgtgttctccgggtcttcattgcaaaaacata
agaagcaatatatgtaagaataaatggagctctattttatgttcagttgt
ccaataaaaaattaaaatttttctatcatatgaaagatatcattctctat
gttgtagttgagaacaacattaacatagataacattattggagaaatttt
attctgttatttataccacatgggaaaatggcaaatactatagactagta
agattataaggttataccacattttgtatcttcatttctaaagacaatga
gaatgacataactatctactttcaaagttaagaaaatatgatgaatacag
aatttttcattcacttcaaagttctgaataagaattctaatctaaattaa
tataccacaaatagggagcctcaataagaataagtcaaatagtgtgttta
ttcagccctttttgttggagtcctatttcaaattttgctaataaagggtg
ttcatatttagaaatatttacttcataatactttcttaattaataatatg
atcattaaatatgatattttattaaatgtattgatgaaaaatattttgaa
aacaagtgaaaggttggagaacccccaagaagttcatgtagtacatgaaa
acttgatgttagctgatttatataaatactgatcaaaatttatctaagtt
taatatttttctaagtttttacatgattttcacatgtcttaatctcttat
tttacttaggatttaaaacatagtaagaagtattagtcttataaagtaat
ttaaaatatgtacctttttttccatttggggcacattgaatctcatatat
aagtgtacacttcagatttaataaaatgctaattgtattttctatcagtt
ctttatcattgattttccatctttttttatttcagaactcttctttcttt
cttgctttctgcttgctttctctgtctctctgtctctctctctttcttta
tctctctctctctctctctctaacctccatcccagtgcatgcatgtgtgt
tagggtgttgtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_90290410_90291475
seq2: B6Ng01-262F19.g_64_1128 (reverse)

seq1  ATACAC-ACACCCT-ACACACATGCATGCACTGGGATGGAGGTAAGAGAG  48
      |||||| ||||||| |||||||||||||||||||||||||||| ||||||
seq2  ATACACAACACCCTAACACACATGCATGCACTGGGATGGAGGTTAGAGAG  50

seq1  AGAGAGAGAGAGAGATAAAGAAAGAGAGAGAGACAGAGAGACAGAGAAAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGATAAAGAAAGAGAGAGAGACAGAGAGACAGAGAAAG  100

seq1  CAAGCAAGAAAGCAAGAAAGAAAGAAGAGTTCTGAAAATAAAAAAAAGAT  148
      ||||| |||||||||||||||||||||||||||||||   ||||||||||
seq2  CAAGC-AGAAAGCAAGAAAGAAAGAAGAGTTCTGAAA--TAAAAAAAGAT  147

seq1  GGAAAATCAATGATAAAGAACTGATAGAAAATACAATTAGCATTTTATTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATCAATGATAAAGAACTGATAGAAAATACAATTAGCATTTTATTA  197

seq1  AATCTGAAGTGTACACTTATATATGAGATTCAATGTGCCCCAAATGGAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAGTGTACACTTATATATGAGATTCAATGTGCCCCAAATGGAAA  247

seq1  AAAAGGTACATATTTTAAATTACTTTATAAGACTAATACTTCTTACTATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTACATATTTTAAATTACTTTATAAGACTAATACTTCTTACTATG  297

seq1  TTTTAAATCCTAAGTAAAATAAGAGATTAAGACATGTGAAAATCATGTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATCCTAAGTAAAATAAGAGATTAAGACATGTGAAAATCATGTAA  347

seq1  AAACTTAGAAAAATATTAAACTTAGATAAATTTTGATCAGTATTTATATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAAAAATATTAAACTTAGATAAATTTTGATCAGTATTTATATA  397

seq1  AATCAGCTAACATCAAGTTTTCATGTACTACATGAACTTCTTGGGGGTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTAACATCAAGTTTTCATGTACTACATGAACTTCTTGGGGGTTC  447

seq1  TCCAACCTTTCACTTGTTTTCAAAATATTTTTCATCAATACATTTAATAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTTTCACTTGTTTTCAAAATATTTTTCATCAATACATTTAATAA  497

seq1  AATATCATATTTAATGATCATATTATTAATTAAGAAAGTATTATGAAGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATATTTAATGATCATATTATTAATTAAGAAAGTATTATGAAGTA  547

seq1  AATATTTCTAAATATGAACACCCTTTATTAGCAAAATTTGAAATAGGACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTAAATATGAACACCCTTTATTAGCAAAATTTGAAATAGGACT  597

seq1  CCAACAAAAAGGGCTGAATAAACACACTATTTGACTTATTCTTATTGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAAAGGGCTGAATAAACACACTATTTGACTTATTCTTATTGAGG  647

seq1  CTCCCTATTTGTGGTATATTAATTTAGATTAGAATTCTTATTCAGAACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTATTTGTGGTATATTAATTTAGATTAGAATTCTTATTCAGAACTT  697

seq1  TGAAGTGAATGAAAAATTCTGTATTCATCATATTTTCTTAACTTTGAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGAATGAAAAATTCTGTATTCATCATATTTTCTTAACTTTGAAAG  747

seq1  TAGATAGTTATGTCATTCTCATTGTCTTTAGAAATGAAGATACAAAATGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTTATGTCATTCTCATTGTCTTTAGAAATGAAGATACAAAATGT  797

seq1  GGTATAACCTTATAATCTTACTAGTCTATAGTATTTGCCATTTTCCCATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAACCTTATAATCTTACTAGTCTATAGTATTTGCCATTTTCCCATG  847

seq1  TGGTATAAATAACAGAATAAAATTTCTCCAATAATGTTATCTATGTTAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAAATAACAGAATAAAATTTCTCCAATAATGTTATCTATGTTAAT  897

seq1  GTTGTTCTCAACTACAACATAGAGAATGATATCTTTCATATGATAGAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTCAACTACAACATAGAGAATGATATCTTTCATATGATAGAAAA  947

seq1  ATTTTAATTTTTTATTGGACAACTGAACATAAAATAGAGCTCCATTTATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTTTTATTGGACAACTGAACATAAAATAGAGCTCCATTTATT  997

seq1  CTTACATATATTGCTTCTTATGTTTTTGCAATGAAGACCCGGAGAACACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATATATTGCTTCTTATGTTTTTGCAATGAAGACCCGGAGAACACA  1047

seq1  AAATCTGAGACAGAATTC  1066
      ||||||||||||||||||
seq2  AAATCTGAGACAGAATTC  1065


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