BAC Information

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BAC

Clone NameB6Ng01-264E13
Chromosome18 (Build37)
Map Location 65,738,150 - 65,903,373
singlet/doubletdoublet
Overlap geneZfp532, 5330437I02Rik
Upstream geneAtp8b1, LOC629480, Nedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820
Downstream geneSec11c, Grp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264E13.bB6Ng01-264E13.g
ACCGA068228GA068229
length423215
definitionB6Ng01-264E13.b B6Ng01-264E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,738,150 - 65,738,578)(65,903,159 - 65,903,373)
sequence
aatgattttgcaaaatgggttcaaatgggtgctttgtttttaactatcgg
tttatctggctgagagctttctctgaagccctcattgtaaaaaagagaaa
ggagagaatttgctagaaatggttatcttttacttttttggttgtttgtg
gcttaaaagcagatgcagtgttagctcctgtcttttgtgcaaaccatgag
cgtgggctatgaaaccaaatcccccagccaaggcttgaccacaacaccag
gctttgatggagccctgctcacaaagcctttggcattacaaattcatagg
gcagttgcacagctggattcctaggataagcaagttagactttggtttaa
ggggcacaactcttgtaaccatttaaacccctcttcccgaagctttccgt
ggtatggtagggagtgggggagg
actcacaaatacaaaccaactacataagtctcattctgggccatggtgca
cgcgcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccaca
tgtgtgtctttccatgtagatgctagatgatgacagccttggatattgtt
cctcaggcccatctttttaacttaaatttgttgttttgggttggttggtt
gggtttgtgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65738150_65738578
seq2: B6Ng01-264E13.b_48_476

seq1  GAATTCAATGATTTTGCAAAATGGGTTCAAATGGGTGCTTTGTTTTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGATTTTGCAAAATGGGTTCAAATGGGTGCTTTGTTTTTAAC  50

seq1  TATCGGTTTATCTGGCTGAGAGCTTTCTCTGAAGCCCTCATTGTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGGTTTATCTGGCTGAGAGCTTTCTCTGAAGCCCTCATTGTAAAAAA  100

seq1  GAGAAAGGAGAGAATTTGCTAGAAATGGTTATCTTTTACTTTTTTGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAGAGAATTTGCTAGAAATGGTTATCTTTTACTTTTTTGGTTG  150

seq1  TTTGTGGCTTAAAAGCAGATGCAGTGTTAGCTCCTGTCTTTTGTGCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGCTTAAAAGCAGATGCAGTGTTAGCTCCTGTCTTTTGTGCAAAC  200

seq1  CATGAGCGTGGGCTATGAAACCAAATCCCCCAGCCAAGGCTTGACCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCGTGGGCTATGAAACCAAATCCCCCAGCCAAGGCTTGACCACAA  250

seq1  CACCAGGCTTTGATGGAGCCCTGCTCACAAAGCCTTTGGCATTACAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTTTGATGGAGCCCTGCTCACAAAGCCTTTGGCATTACAAATT  300

seq1  CATAGGGCAGTTGCACAGCTGGATTCCTAGGATAAGCAAGTTAGACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGCAGTTGCACAGCTGGATTCCTAGGATAAGCAAGTTAGACTTTG  350

seq1  GTTTAAGGGGCACAACTCTTGTAACCATTTAAACCCCTCTTCCCGAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGGGGCACAACTCTTGTAACCATTTAAACCCCTCTTCCCGAAGCT  400

seq1  TTCCGTGGTATGGTAGGGAGTGGGGGAGG  429
      |||||||||||||||||||||||||||||
seq2  TTCCGTGGTATGGTAGGGAGTGGGGGAGG  429

seq1: chr18_65903159_65903373
seq2: B6Ng01-264E13.g_75_289 (reverse)

seq1  ACACCACACAAACCCAACCAACCAACCCAAAACAACAAATTTAAGTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACACAAACCCAACCAACCAACCCAAAACAACAAATTTAAGTTAAA  50

seq1  AAGATGGGCCTGAGGAACAATATCCAAGGCTGTCATCATCTAGCATCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGGCCTGAGGAACAATATCCAAGGCTGTCATCATCTAGCATCTAC  100

seq1  ATGGAAAGACACACATGTGGACACACACACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGACACACATGTGGACACACACACACACACACACACACACACAC  150

seq1  ACACACACCTGCGCGTGCACCATGGCCCAGAATGAGACTTATGTAGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCTGCGCGTGCACCATGGCCCAGAATGAGACTTATGTAGTTGG  200

seq1  TTTGTATTTGTGAGT  215
      |||||||||||||||
seq2  TTTGTATTTGTGAGT  215