BAC Information

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BAC

Clone NameB6Ng01-264N05
Chromosome18 (Build37)
Map Location 48,583,387 - 48,740,421
singlet/doubletdoublet
Overlap genenone
Upstream gene9130209A04Rik, A730092B10, LOC383325, LOC100042982, LOC100042284, LOC100042301, EG433182, LOC383326, LOC100042323
Downstream geneLOC545470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264N05.bB6Ng01-264N05.g
ACCGA068632GA068633
length1,171219
definitionB6Ng01-264N05.b B6Ng01-264N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,739,235 - 48,740,421)(48,583,387 - 48,583,605)
sequence
ggaattccagctgttgaaattacagagaaaactaacctgaggtcttgggc
ttttgagggaggccgatttataccactcacataaagaggcccaggtgacc
cagcacagacatcttaattaccttctagaaacattaaatatgtattattt
taagcaattgattttcaagttggtttcctattcagcaaaagaaaagccaa
ctcgtaatatatagtcttcataaagcaattatgttttatctaaattttca
caatgccttaattaccaaataaataatatagctttttaagattactaatt
catttgtttgcctaatttaactacaagtagaatttcatgaacaaattcat
ttgcctaatttttctgtattgcttacaactattatgaactattttgaaat
tggtggcatttatctaagatgttaacattactctaaattgatctttctcc
ctgcgcaggcctggaagaaccagtttgtgtggtgtggtgagacttgctct
gaattcagtttttaattttttgactcactttcctaatttgtaggacaggg
aaagccagacagatcctcaacatttctgagtagcatcacagactaggaac
agctgccatgggttccagacatcacttgaacagttaatgctgtcatttgt
ttcaaagatgcctaatcactgaagcaaggttcccagactgtcaacactgg
caccatttagaatttagtagaaatgcaggaagttaggctgcatcctaaga
tcctccgagtcagaattgccatattaataagctcatgtttgtacacagca
gtgtgtgaagctctgaaatgtttcctggtcataaatgaatctgcacttat
tctattgcctcataaactatcctggaaccactagctgaggtttttagttc
tcatatctcctctaatgctgccatgaagtacaggaaatcctatgtgaact
atgtgattatttccaaaactctgaattagtagttaaacccaaaagaaatt
gattatgttctatttcttttcatttattaaaatttaaccagatcctgtct
aaatgaaatgcataagtgagcagagactgaagaaatggcatcagagactg
ccccaactagcttcatcaatctacagaaccaactgactattgctgagtct
agagtgcttgctgtcaggagc

atcagaagtcagaaggtaggcagcttgtggctagagtattgactgtttct
ctacagtgttgatttcacactgaagatttaaccacagtcatcacacctgc
tataaaatcaatactatctaacccatgtccaaagtgtccacacacacagg
cacatgcatgcgaaaaacgaggtacacatttgtgtaccgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_48739235_48740421
seq2: B6Ng01-264N05.b_50_1220 (reverse)

seq1  GCTCCTGACAGCAAGCACTTCTTAGCATCAGCAATAGTGTCTAGGTTTGG  50
      |||||||||||||||||||   |||  |||||||||||    ||  ||||
seq2  GCTCCTGACAGCAAGCACT--CTAGACTCAGCAATAGT---CAG--TTGG  43

seq1  TGTCTGTAGATGGGATGAAGCCTTAGGTGGGGCAGTCTCTGGATGCCCTT  100
      | |||||||||  ||||||||  ||| ||||||||||||| |||||| ||
seq2  T-TCTGTAGAT-TGATGAAGC--TAGTTGGGGCAGTCTCT-GATGCCATT  88

seq1  TCCTTCAGTCTCTGCTCCACTCTGCATTTCATTTAGACAGGATCTGGGTT  150
      | |||||||||||||||   | ||||||||||||||||||||||| ||||
seq2  T-CTTCAGTCTCTGCTCACTTATGCATTTCATTTAGACAGGATCT-GGTT  136

seq1  AAATTTTAATAAATGAAAAGAAATAGAACATAATCAATTTCTTTTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATTTTAATAAATGAAAAGAAATAGAACATAATCAATTTCTTTTGGGTT  186

seq1  AAACTACTAAATTCAGAGTTTTTGGAAATAATCACATAGTTCACATAGGA  250
       ||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  TAACTACT-AATTCAGAG-TTTTGGAAATAATCACATAGTTCACATAGGA  234

seq1  TTTCCTGTACTTCATGGCAGCATTAGAGGAGATATGAGAACTAAAAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTACTTCATGGCAGCATTAGAGGAGATATGAGAACTAAAAACCT  284

seq1  CAGCTAGTGGTTCCAGGATAGTTTATGAGGCAATAGAATAAGTGCAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGTGGTTCCAGGATAGTTTATGAGGCAATAGAATAAGTGCAGATT  334

seq1  CATTTATGACCAGGAAACATTTCAGAGCTTCACACACTGCTGTGTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGACCAGGAAACATTTCAGAGCTTCACACACTGCTGTGTACAAA  384

seq1  CATGAGCTTATTAATATGGCAATTCTGACTCGGAGGATCTTAGGATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCTTATTAATATGGCAATTCTGACTCGGAGGATCTTAGGATGCAG  434

seq1  CCTAACTTCCTGCATTTCTACTAAATTCTAAATGGTGCCAGTGTTGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTCCTGCATTTCTACTAAATTCTAAATGGTGCCAGTGTTGACAG  484

seq1  TCTGGGAACCTTGCTTCAGTGATTAGGCATCTTTGAAACAAATGACAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAACCTTGCTTCAGTGATTAGGCATCTTTGAAACAAATGACAGCA  534

seq1  TTAACTGTTCAAGTGATGTCTGGAACCCATGGCAGCTGTTCCTAGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTTCAAGTGATGTCTGGAACCCATGGCAGCTGTTCCTAGTCTGT  584

seq1  GATGCTACTCAGAAATGTTGAGGATCTGTCTGGCTTTCCCTGTCCTACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTACTCAGAAATGTTGAGGATCTGTCTGGCTTTCCCTGTCCTACAA  634

seq1  ATTAGGAAAGTGAGTCAAAAAATTAAAAACTGAATTCAGAGCAAGTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAAGTGAGTCAAAAAATTAAAAACTGAATTCAGAGCAAGTCTCA  684

seq1  CCACACCACACAAACTGGTTCTTCCAGGCCTGCGCAGGGAGAAAGATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACACAAACTGGTTCTTCCAGGCCTGCGCAGGGAGAAAGATCAA  734

seq1  TTTAGAGTAATGTTAACATCTTAGATAAATGCCACCAATTTCAAAATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTAATGTTAACATCTTAGATAAATGCCACCAATTTCAAAATAGT  784

seq1  TCATAATAGTTGTAAGCAATACAGAAAAATTAGGCAAATGAATTTGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATAGTTGTAAGCAATACAGAAAAATTAGGCAAATGAATTTGTTCA  834

seq1  TGAAATTCTACTTGTAGTTAAATTAGGCAAACAAATGAATTAGTAATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTACTTGTAGTTAAATTAGGCAAACAAATGAATTAGTAATCTT  884

seq1  AAAAAGCTATATTATTTATTTGGTAATTAAGGCATTGTGAAAATTTAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTATATTATTTATTTGGTAATTAAGGCATTGTGAAAATTTAGAT  934

seq1  AAAACATAATTGCTTTATGAAGACTATATATTACGAGTTGGCTTTTCTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAATTGCTTTATGAAGACTATATATTACGAGTTGGCTTTTCTTT  984

seq1  TGCTGAATAGGAAACCAACTTGAAAATCAATTGCTTAAAATAATACATAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATAGGAAACCAACTTGAAAATCAATTGCTTAAAATAATACATAT  1034

seq1  TTAATGTTTCTAGAAGGTAATTAAGATGTCTGTGCTGGGTCACCTGGGCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTTCTAGAAGGTAATTAAGATGTCTGTGCTGGGTCACCTGGGCC  1084

seq1  TCTTTATGTGAGTGGTATAAATCGGCCTCCCTCAAAAGCCCAAGACCTCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGTGAGTGGTATAAATCGGCCTCCCTCAAAAGCCCAAGACCTCA  1134

seq1  GGTTAGTTTTCTCTGTAATTTCAACAGCTGGAATTCC  1187
      |||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTTTTCTCTGTAATTTCAACAGCTGGAATTCC  1171


seq1: chr18_48583387_48583605
seq2: B6Ng01-264N05.g_75_293

seq1  ATCAGAAGTCAGAAGGTAGGCAGCTTGTGGCTAGAGTATTGACTGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGTCAGAAGGTAGGCAGCTTGTGGCTAGAGTATTGACTGTTTCT  50

seq1  CTACAGTGTTGATTTCACACTGAAGATTTAACCACAGTCATCACACCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGTTGATTTCACACTGAAGATTTAACCACAGTCATCACACCTGC  100

seq1  TATAAAATCAATACTATCTAACCCATGTCCAAAGTGTCCACACACACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATCAATACTATCTAACCCATGTCCAAAGTGTCCACACACACAGG  150

seq1  CACATGCATGCGAAAAACGAGGTACACATTTGTGTACCGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATGCGAAAAACGAGGTACACATTTGTGTACCGTGTGTGTGTGT  200

seq1  GTGTGTGTGTGTGTGTGTG  219
      |||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTG  219


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