BAC Information

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BAC

Clone NameB6Ng01-265C14
Chromosome18 (Build37)
Map Location 59,084,938 - 59,244,389
singlet/doubletdoublet
Overlap geneAdamts19, A730017C20Rik
Upstream geneSlc12a2, Fbn2, Slc27a6, Isoc1
Downstream gene4833446K15Rik, LOC667549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265C14.bB6Ng01-265C14.g
ACCGA068884GA068885
length1,129587
definitionB6Ng01-265C14.b B6Ng01-265C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,243,248 - 59,244,389)(59,084,938 - 59,085,523)
sequence
gaattcaaagaaaaggcatctcagttcccactctgttccactccatcaga
aaacctcactcaggtcaagactgtatttacaattttgactggtatttctg
ttctcttctttctttacacctcactaaccctgaagcatgttttctagaaa
cagcatcagctctcgatccttccccacatctcagctcctgactgccaggt
atagtaagtactgtctgcagagtcaacaaacaaaatgggaatacagggca
caatttcagagcattttaaatggaaatatggtgaaaaacatcttaaaata
ttggaggaaatagttctcaacgtagtaataaaataacaatgatagcatta
aataatatataaactaaatgtgagtaattttaatgcattttataattaaa
gaatgacccagaatatttgctttaaatttatttgcagatagaaaagctaa
gaagtttcagaaagaatcaaaagcatggtattataaaatagcttcatttt
tactgacttttgaatgataattcacttaagtctacctgtgagaattattt
gagggctggtgagatggctcagtgggtaagagcacccgactgttcttccg
aaggtctgaagttcaaatcccagcaaccacatggtggctcacaaccatct
gtaacaagatctgacgccctcttctggagtgtctgaagacagctacagtg
tacttacatataataaataaataaatctttaaaaaaaaaaaaaaagagaa
ttatttgatctaaatacagaaccttctggcaacacatataacattgctat
tgaaggacagataagtgacagagaaaaagtcaagtctgggagtgtataat
tttatgagattttgagttttaaacactaatagcttcttgtgttttaccct
agattcaggattccatcgcccaccaactacttccctgacgctggtgttac
tcacacatacaagtcagcccaactcttggctaatattttcttcgtgggcg
tgcatctgtctctttatcaaatgtcttttactcatgttcccacaaggtct
gcaactctggggaaatctacaacatgtactgtctgagaaaggtgtcacag
tgatccctgcttacgatcgtcagagagaa

gaattcatgagcatagacagtatattaaccaccattcttcatggttcttg
tctaggctcgttgatttcccactttggctttcttcaatgatggactatcc
ttggggcatataagacaaatagctttttctctcacaagatgcctttgggc
agtgttttatcatggtagcaaaaagcaaactagaacaagagatagatgtg
atctttatccaaaaataagacaaataattcaagatagatatagttcataa
gaacttagagtatttaataaatcaataacttagctttgaagtgagcaaaa
caaaaaattaataggcactcaccgtggaaacatcaaaaacttacaaattt
aatggaattttaacatttaatttttacttataaatgcaaaaaattaatcc
aactttattttattaagcaattctctcatgatatgtaataggttaatgta
gttaacaagtatagaaatctgtttgagaaaataatgcatttaaatatgca
atggtatttacaagacaaaaagcccactgaaaaaacatggagtttccttt
ggtatagaaacgttttcaaaatgttattttagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59243248_59244389
seq2: B6Ng01-265C14.b_46_1174 (reverse)

seq1  TTCTCTCTGGAACCTATCCGTAAAGCAGGGATCACTGTGACCACCTTTTC  50
      |||||||||    | || ||| |||||||||||||||||| |||| ||||
seq2  TTCTCTCTG---ACGAT-CGT-AAGCAGGGATCACTGTGA-CACC-TTTC  43

seq1  TCAGACAGTACATGGTTTGTAGATTTCCCCAGAAGTTGCAGAACCCTTGT  100
      ||||||||||||||  |||||||||||||||| |||||||||  ||||||
seq2  TCAGACAGTACATG--TTGTAGATTTCCCCAG-AGTTGCAGA--CCTTGT  88

seq1  GGGAAACAATGAGTAAAAGACATTTGATAAAGAGACAGATGCACGCCCAC  150
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAA--CATGAGTAAAAGACATTTGATAAAGAGACAGATGCACGCCCAC  136

seq1  GAAGAAAATATTAGCCAAGAGTTGGGCTGACTTGTATGTGTGAGTAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATTAGCCAAGAGTTGGGCTGACTTGTATGTGTGAGTAACAC  186

seq1  CAGCGTCA-GGAAGTAGTTGGTGGGCGATGGAATCCTGAATCTAGGGTAA  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTCAGGGAAGTAGTTGGTGGGCGATGGAATCCTGAATCTAGGGTAA  236

seq1  AACACAAGAAGCTATTAGTGTTTAAAACTCAAAATCTCATAAAATTATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGAAGCTATTAGTGTTTAAAACTCAAAATCTCATAAAATTATAC  286

seq1  ACTCCCAGACTTGACTTTTTCTCTGTCACTTATCTGTCCTTCAATAGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGACTTGACTTTTTCTCTGTCACTTATCTGTCCTTCAATAGCAA  336

seq1  TGTTATATGTGTTGCCAGAAGGTTCTGTATTTAGATCAAATAATTCTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATGTGTTGCCAGAAGGTTCTGTATTTAGATCAAATAATTCTCTT  386

seq1  TTTTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTA  436

seq1  GCTGTCTTCAGACACTCCAGAAGAGGGCGTCAGATCTTGTTACAGATGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCAGACACTCCAGAAGAGGGCGTCAGATCTTGTTACAGATGGT  486

seq1  TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAGACCTTCGGAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTCAGACCTTCGGAAGA  536

seq1  ACAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCAAATAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCTCAAATAAT  586

seq1  TCTCACAGGTAGACTTAAGTGAATTATCATTCAAAAGTCAGTAAAAATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGGTAGACTTAAGTGAATTATCATTCAAAAGTCAGTAAAAATGA  636

seq1  AGCTATTTTATAATACCATGCTTTTGATTCTTTCTGAAACTTCTTAGCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTATAATACCATGCTTTTGATTCTTTCTGAAACTTCTTAGCTT  686

seq1  TTCTATCTGCAAATAAATTTAAAGCAAATATTCTGGGTCATTCTTTAATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTGCAAATAAATTTAAAGCAAATATTCTGGGTCATTCTTTAATT  736

seq1  ATAAAATGCATTAAAATTACTCACATTTAGTTTATATATTATTTAATGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCATTAAAATTACTCACATTTAGTTTATATATTATTTAATGCT  786

seq1  ATCATTGTTATTTTATTACTACGTTGAGAACTATTTCCTCCAATATTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTTATTTTATTACTACGTTGAGAACTATTTCCTCCAATATTTTA  836

seq1  AGATGTTTTTCACCATATTTCCATTTAAAATGCTCTGAAATTGTGCCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTTTCACCATATTTCCATTTAAAATGCTCTGAAATTGTGCCCTG  886

seq1  TATTCCCATTTTGTTTGTTGACTCTGCAGACAGTACTTACTATACCTGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCATTTTGTTTGTTGACTCTGCAGACAGTACTTACTATACCTGGC  936

seq1  AGTCAGGAGCTGAGATGTGGGGAAGGATCGAGAGCTGATGCTGTTTCTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAGCTGAGATGTGGGGAAGGATCGAGAGCTGATGCTGTTTCTAG  986

seq1  AAAACATGCTTCAGGGTTAGTGAGGTGTAAAGAAAGAAGAGAACAGAAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGCTTCAGGGTTAGTGAGGTGTAAAGAAAGAAGAGAACAGAAAT  1036

seq1  ACCAGTCAAAATTGTAAATACAGTCTTGACCTGAGTGAGGTTTTCTGATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCAAAATTGTAAATACAGTCTTGACCTGAGTGAGGTTTTCTGATG  1086

seq1  GAGTGGAACAGAGTGGGAACTGAGATGCCTTTTCTTTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAACAGAGTGGGAACTGAGATGCCTTTTCTTTGAATTC  1129


seq1: chr18_59084938_59085523
seq2: B6Ng01-265C14.g_69_655

seq1  GAATTCATGAGCATAGACAGTATATTAACCACCATTCTTCATGGTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGCATAGACAGTATATTAACCACCATTCTTCATGGTTCTTG  50

seq1  TCTAGGCTCGTTGATTTCCCACTTTGGCTTTCTTCAATGATGGACTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCTCGTTGATTTCCCACTTTGGCTTTCTTCAATGATGGACTATCC  100

seq1  TTGGGGCATATAAGACAAATAGCTTTTTCTCTCACAAGATGCCTTTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCATATAAGACAAATAGCTTTTTCTCTCACAAGATGCCTTTGGGC  150

seq1  AGTGTTTTATCATGGTAGCAAAAAGCAAACTAGAACAAGAGATAGATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTATCATGGTAGCAAAAAGCAAACTAGAACAAGAGATAGATGTG  200

seq1  ATCTTTATCCAAAAATAAGACAAATAATTCAAGATAGATATAGTTCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATCCAAAAATAAGACAAATAATTCAAGATAGATATAGTTCATAA  250

seq1  GAACTTAGAGTATTTAATAAATCAATAACTTAGCTTTGAAGTGAGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAGAGTATTTAATAAATCAATAACTTAGCTTTGAAGTGAGCAAAA  300

seq1  CAAAAAATTAATAGGCACTCACCGTGGAAACATCAAAAACTTACAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTAATAGGCACTCACCGTGGAAACATCAAAAACTTACAAATTT  350

seq1  AATGGAATTTTAACATTTAATTTTTACTTATAAATGCAAAAAATTAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATTTTAACATTTAATTTTTACTTATAAATGCAAAAAATTAATCC  400

seq1  AACTTTATTTTATTAAGCAATTCTCTCATGATATGTAATAGGTTAATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATTTTATTAAGCAATTCTCTCATGATATGTAATAGGTTAATGTA  450

seq1  GTTAACAAGTATAGAAATCTGTTTGAGAAAATAATGCATTTAAATATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAAGTATAGAAATCTGTTTGAGAAAATAATGCATTTAAATATGCA  500

seq1  ATGGTATTTACAAGACAAAAAGCCCACTGAAAAAACATGGAGTTTCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTTACAAGACAAAAAGCCCACTGAAAAAACATGGAGTTTCCTTT  550

seq1  GGTATAGAAACGTTTTCAAAATGTTA-TTTAGTGTGT  586
      |||||||||||||||||||||||||| ||||||||||
seq2  GGTATAGAAACGTTTTCAAAATGTTATTTTAGTGTGT  587


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