BAC Information

Click to search

BAC

Clone NameB6Ng01-267P18
Chromosome18 (Build37)
Map Location 48,951,007 - 48,952,142
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042284, LOC100042301, EG433182, LOC383326, LOC100042323, LOC545470
Downstream geneDtwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267P18.bB6Ng01-267P18.g
ACCGA070966GA070967
length1,1461,109
definitionB6Ng01-267P18.b B6Ng01-267P18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttgggattaagggcttcatagtaatggctgccaatgtgaca
tggtgtaggtttatacaatgcaatatgttctctgtcatgtaatttgcata
catttttttttttactctttaaatctttgtgactgttggtttgttttatt
tcttatcagatgaatcttggacataaagctgaattagcaaatgtggaggc
agttataggactcagggggtacaggtgctagctgccaagtggactgcctg
agtttcattcccaggatcaacatggtggaatcagagaatcaaccttgtaa
gttgttctctggcctacacatgaacttggtagcatatgaacataagagtg
tacacatgcacacacaaaactatacacgcaataataagtaaaattatttt
ctttataaataattagcaagtatttttatagttagtagagataagccact
attgagtggttggactcaaactatttcatatcctctgtatcctctataag
caatcatgaaacgaattttacattttgatactgttatatttaatttatat
tacaattcattggtattgtcttatttcattaagctattttagagcatatg
aatcatactatgaaatagatttataaatatgcaaaatttctatatacatg
cgagtttaatatataatgatcataaagtatcatctgtcttcctaaatcca
gagccatttcagaatgtaaacttcagccactgtgcgctgaatcattttac
cattatgtcatttcaagttgcctgacactcacaggctggtaagagtcaag
gaatgcccagggtgtgaactgtgaggtttgtgggggctgcactgaaatcg
atccctttgctgttcttattaaattttcagaaaggaaaaaatagttcttt
ttgccatgactttgttcttcattgtgggattgtgaagtttttatgcactc
cagactcacaaggagaattagtcttcagcaactgtagcagtggcctgcct
tctttactgggcacctgctgcttcttcttagggtgatttaaaccacaaaa
gttggagcttcttattagtagctaaaattaaacatgaaaatatttctatc
aatagtttgtctgttacagcaggtacgtcagggttatgtgcattta
gaattctattcatgtgtctatcttcctttagttttgttgaaagaagatta
ctttcttgctttttctagggtgtagtttccttccttgagttggagtttta
cacttattatcttttgaagggctgtatttgtagaaagatattgtgtaaat
ttgttttgtcatggaataccttgggtttttcgatctatggtaatagagag
ttttactgggtatagtagcctgggctggcatttgtgttcttttagggtct
gtatgacatttgtccaggatcttctggctttcatagtctctgtagtaaag
tctggtgtaattctgataggtctgcctctatacgttacttgacgttttac
cccttcctgcctttaatattcttttttgttttatgcatttggtgctttga
ctattatgtgaggggaggaatttcttttctggcccaatctacttggtgtt
ctgtaggcttcttgtatgctcatgggcatccctttctttcagtttgagaa
attttcttacataattttgttgaatatatttattggccctttacattggg
aatcttcactctcttctatacttattatccttaggtttggtcttctcatt
gtgtcctggatttcctggatgttttgggctaggatctttttgcattttgt
attttctttgattgttgtgtctatgttttgtatggtattttctgcacctg
tgattctctctttccatctcttgtattctctcttagtgatgtttgcatct
ttgtctcctgatctctttcctaggtttttctattttcagagttgtctccg
tttgtgatatctttattgtttctatttccattttcagattctgcatggtt
ttgttcatttttgttcacctgttcagttgtgttttcctgtaattctttaa
gggatttttgtgttttttcttttaagggcttctctacctctttacttgtg
ttctcctgtattttctttaaggggaatttatttattgtccttaaattcct
ctatcagcattcatgaattatggattttaaaccgaatcttgcctttttga
tatgtggtgtattcaaggaactggctgtggcggggaagactcggtttctt
gaagtatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_48951007_48952142
seq2: B6Ng01-267P18.b_47_1192

seq1  GAATTCTCTTTGGGATTAAGGGCTTCATAGTAATGGCTGCCAATGTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGGGATTAAGGGCTTCATAGTAATGGCTGCCAATGTGACA  50

seq1  TGGTGTAGGTTTATACAATGCAATATGTTCTCTGTCATGTAATTTGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAGGTTTATACAATGCAATATGTTCTCTGTCATGTAATTTGCATA  100

seq1  CATTTTTTTTTTTACTCTTTAAATCTTTGTGACTGTTGGTTTGTTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTTTTACTCTTTAAATCTTTGTGACTGTTGGTTTGTTTTATT  150

seq1  TCTTATCAGATGAATCTTGGACATAAAGCTGAATTAGCAAATGTGGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCAGATGAATCTTGGACATAAAGCTGAATTAGCAAATGTGGAGGC  200

seq1  AGTTATAGGACTCAGGGGGTACAGGTGCTAGCTGCCAAGTGGACTGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGGACTCAGGGGGTACAGGTGCTAGCTGCCAAGTGGACTGCCTG  250

seq1  AGTTTCATTCCCAGGATCAACATGGTGGAATCAGAGAATCAACCTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATTCCCAGGATCAACATGGTGGAATCAGAGAATCAACCTTGTAA  300

seq1  GTTGTTCTCTGGCCTACACATGAACTTGGTAGCATATGAACATAAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTCTGGCCTACACATGAACTTGGTAGCATATGAACATAAGAGTG  350

seq1  TACACATGCACACACAAAACTATACACGCAATAATAAGTAAAATTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGCACACACAAAACTATACACGCAATAATAAGTAAAATTATTTT  400

seq1  CTTTATAAATAATTAGCAAGTATTTTTATAGTTAGTAGAGATAAGCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAAATAATTAGCAAGTATTTTTATAGTTAGTAGAGATAAGCCACT  450

seq1  ATTGAGTGGTTGGACTCAAACTATTTCATATCCTCTGTATCCTCTATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTGGTTGGACTCAAACTATTTCATATCCTCTGTATCCTCTATAAG  500

seq1  CAATCATGAAACGAATTTTACATTTTGATACTGTTATATTTAATTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGAAACGAATTTTACATTTTGATACTGTTATATTTAATTTATAT  550

seq1  TACAATTCATTGGTATTGTCTTATTTCATTAAGCTATTTTAGAGCATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCATTGGTATTGTCTTATTTCATTAAGCTATTTTAGAGCATATG  600

seq1  AATCATACTATGAAATAGATTTATAAATATGCAAAATTTCTATATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATACTATGAAATAGATTTATAAATATGCAAAATTTCTATATACATG  650

seq1  CGAGTTTAATATATAATGATCATAAAGTATCATCTGTCTTCCTAAATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTTAATATATAATGATCATAAAGTATCATCTGTCTTCCTAAATCCA  700

seq1  GAGCCATTTCAGAATGTAAACTTCAGCCACTGTGCGCTGAATCATTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTTCAGAATGTAAACTTCAGCCACTGTGCGCTGAATCATTTTAC  750

seq1  CATTATGTCATTTCAAGTTGCCTGACACTCACAGGCTGGTAAGAGTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGTCATTTCAAGTTGCCTGACACTCACAGGCTGGTAAGAGTCAAG  800

seq1  GAATGCCCAGGGTGTGAACTGTGAGGTTTGTGGGGGCTGCACTGAAATCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCCAGGGTGTGAACTGTGAGGTTTGTGGGGGCTGCACTGAAATCG  850

seq1  ATCCCTTTGCTGTTCTTATTAAATTTTCAG-AAGGGAAAAATAGTTCTTT  899
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  ATCCCTTTGCTGTTCTTATTAAATTTTCAGAAAGGAAAAAATAGTTCTTT  900

seq1  TTGCCATGACTTTGTTCTTCATTGTGGGATTGTGAAGTTTTTATGCACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGACTTTGTTCTTCATTGTGGGATTGTGAAGTTTTTATGCACTC  950

seq1  CAGACTCACAAGGAGAATTAGTC-TCAGCAACTGTAGCAGT-GCCTGCCT  997
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  CAGACTCACAAGGAGAATTAGTCTTCAGCAACTGTAGCAGTGGCCTGCCT  1000

seq1  --CTTACTGGGCA-CTGCTGCTTC-TCT--AGGTGATTTAAA-CACAAAA  1040
         |||||||||| |||||||||| |||   ||||||||||| |||||||
seq2  TCTTTACTGGGCACCTGCTGCTTCTTCTTAGGGTGATTTAAACCACAAAA  1050

seq1  GTT-GAGCTTCTTA-TAGTAGCTAAAA-TAAACATGAAAATATTTCTAAT  1087
      ||| |||||||||| |||||||||||| ||||||||||||||||||||  
seq2  GTTGGAGCTTCTTATTAGTAGCTAAAATTAAACATGAAAATATTTCTA--  1098

seq1  TAAATAATTTGTCTTGGTACAGCCAGTACGTCAAGGTTATGTGCATTTA  1136
      | |||| |||||| || ||||||  |||||||| |||||||||||||||
seq2  TCAATAGTTTGTC-TGTTACAGCAGGTACGTCAGGGTTATGTGCATTTA  1146