BAC Information

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BAC

Clone NameB6Ng01-268K02
Chromosome18 (Build37)
Map Location 59,647,995 - 59,648,997
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268K02.bB6Ng01-268K02.g
ACCGA071437GA071438
length1,193993
definitionB6Ng01-268K02.b B6Ng01-268K02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttttgtatgtttcttatcagtatgggtcttaagatgactttt
gcaacattttataggagcagggaaggagtctgggaagatggttcagtcat
gcaagcatgaggacctgaattcagatttccagtacccaactacagagctg
ggcctagtaatatgtgcctctaagctcagttctggggatccaggtggaga
cctggagctcattaaccagttatccaagtcttcaaatgtcatgttcaatg
agagattttcttttaaaaacatggaaagtctctctctcctctctctcctc
cccctcccctcaacacacacaaaccacctgatattgaagtctagtgttca
catgcacactcacccacatgtgccatctgtgcatatacccatatctgcac
taacatggatacaatactgaagctcggccaattaaaaccctgtcatgatc
cacaaaaattcaataaaaggaagatttccatgctccccaatttaagaagc
caagaaagatatgataaaagaaaaaagtgactcttatatgaaatgatcat
attgcaaatgcacaggaaagttctggagcaagtataaagtactactccag
tgagtcagccaataataaggaagcgctgcatttcccttgctgtaagaagt
gggatagatagaacaccaggccaggcacaacgctcccttatgctaaagcc
caatattagcaaggtttcactctactaaattccataaaggctgagagaaa
tgaggaaactgcagacaatatttaaagccaagttggagttcataagatta
aagccaaaaccccctcccttcaaactggagcctcttgggtaggagcagga
ggaagttacccaggtgatctgcgcagctgagggagattacccagaggatc
tgcacaactaacgcacctgaccaccaggactccacagtggaacacatctt
caccataaacccaacacccctgagagacattcttttgagactttgataac
tatagagaaatctgggtctgcatcgaagcttcaaagaagggattctcttg
ttgagacactgacttttccttgatgccatgtcaatcacattcagaaaaag
cctagatctttaagagtaactaatctattcttgagcctctaacttataat
tgaactacaagtcctaagaattggggtaaacacacaatattcc
gaattctctgcagtgctgctgccgagcatttttagtactattgcttaagt
ctttttcctttgccttgcatgtttaagagtcttttggatgtgctgttcat
gaaaaatgctgcatttacactgtgaaagttacagcacaggagtgggttcc
aaacaaatgtgtctcttctttttaaaaaatgagccctaagctttattaaa
aatgagccctaagctttatttgttcattccttgcatacgaagtggtcttt
gggccagagtatctttgtcatagactttaaccactacacaaccacaacta
ctttcctggggtttccctcgccaacagcgaccaactcttgtcttcagcct
ttggtgggttaatctgctgcttagcacaaagtgtctccaccaacttgaca
tttacatgctcatcgcagctggatgcaagcacatggagatggggttggtg
cttgtttaaggctctggcagctgggctagctgcacatcctgggctctcat
ggatccaggctgtctccagcacctttgtaaatcaggactgaggtctatta
tgcttccagtagcaatgcctccctccactgaggtgttagcatactgctga
agcctagtcttgaatgcacaggagcctctgactctgctcactgggcagca
gaggtaggaaagaaaagcatttcttgtcattgctcattattttattacca
acctacatctgtctaagtagtacaggaaatttcttagttataagatgttt
attctgaaaactagtctatgcctaaacataaacggactaggataagagta
aatatccccaagtgaacgtgggagaaaaaaaaaaaaaaaaaaaaaaaaaa
ccaccacaaatccttaaccctacacaaaaactacaggcaagtaagaaatg
catctatctgtttctgtgccttttctttggctctatccttctgttcatgg
tttgtcctatctgattgtcaatctactgtaactcataattcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59647995_59648997
seq2: B6Ng01-268K02.g_68_1060

seq1  GAATTCTCTGCAGTGCTGCTGCCGAGCATTTTTAGTACTATTGCTTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAGTGCTGCTGCCGAGCATTTTTAGTACTATTGCTTAAGT  50

seq1  CTTTTTCCTTTGCCTTGCATGTTTAAGAGTCTTTTGGATGTGCTGTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTTTGCCTTGCATGTTTAAGAGTCTTTTGGATGTGCTGTTCAT  100

seq1  GAAAAATGCTGCATTTACACTGTGAAAGTTACAGCACAGGAGTGGGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGCTGCATTTACACTGTGAAAGTTACAGCACAGGAGTGGGTTCC  150

seq1  AAACAAATGTGTCTCTTCTTTTTAAAAAATGAGCCCTAAGCTTTATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGTGTCTCTTCTTTTTAAAAAATGAGCCCTAAGCTTTATTAAA  200

seq1  AATGAGCCCTAAGCTTTATTTGTTCATTCCTTGCATACGAAGTGGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCCCTAAGCTTTATTTGTTCATTCCTTGCATACGAAGTGGTCTTT  250

seq1  GGGCCAGAGTATCTTTGTCATAGACTTTAACCACTACACAACCACAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGAGTATCTTTGTCATAGACTTTAACCACTACACAACCACAACTA  300

seq1  CTTTCCTGGGGTTTCCCTCGCCAACAGCGACCAACTCTTGTCTTCAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGGGGTTTCCCTCGCCAACAGCGACCAACTCTTGTCTTCAGCCT  350

seq1  TTGGTGGGTTAATCTGCTGCTTAGCACAAAGTGTCTCCACCAACTTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGTTAATCTGCTGCTTAGCACAAAGTGTCTCCACCAACTTGACA  400

seq1  TTTACATGCTCATCGCAGCTGGATGCAAGCACATGGAGATGGGGTTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGCTCATCGCAGCTGGATGCAAGCACATGGAGATGGGGTTGGTG  450

seq1  CTTGTTTAAGGCTCTGGCAGCTGGGCTAGCTGCACATCCTGGGCTCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTAAGGCTCTGGCAGCTGGGCTAGCTGCACATCCTGGGCTCTCAT  500

seq1  GGATCCAGGCTGTCTCCAGCACCTTTGTAAATCAGGACTGAGGTCTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAGGCTGTCTCCAGCACCTTTGTAAATCAGGACTGAGGTCTATTA  550

seq1  TGCTTCCAGTAGCAATGCCTCCCTCCACTGAGGTGTTAGCATACTGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCAGTAGCAATGCCTCCCTCCACTGAGGTGTTAGCATACTGCTGA  600

seq1  AGCCTAGTCTTGAATGCACAGGAGCCTCTGACTCTGCTCACTGGGCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTCTTGAATGCACAGGAGCCTCTGACTCTGCTCACTGGGCAGCA  650

seq1  GAGGTAGGAAAGAAAAGCATTTCTTGTCATTGCTCATTATTTTATTACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGAAAGAAAAGCATTTCTTGTCATTGCTCATTATTTTATTACCA  700

seq1  ACCTACATCTGTCTAAGTAGTACAGGAAATTTCTTAGTTATAAGATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACATCTGTCTAAGTAGTACAGGAAATTTCTTAGTTATAAGATGTTT  750

seq1  ATTCTGAAAACTAGTCTATGCCTAAACATAAACGGACTAGGATAAGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAAACTAGTCTATGCCTAAACATAAACGGACTAGGATAAGAGTA  800

seq1  AATATCCCCAAGTGAACGTGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAA  850
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  AATATCCCCAAGTGAACGTGGGAG--AAAAAAAAAAAAAAAAAAAAAAAA  848

seq1  AACAACCACAAATCCTTAACCCTACACAAAAACTACAGGCAAGTAAGAAA  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCACAAATCCTTAACCCTACACAAAAACTACAGGCAAGTAAGAAA  898

seq1  TGCATCTATCTGTTTTCTGTGCCTTTTCTTTGGCTCTATTCCTTCTGTTC  950
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  TGCATCTATCTG-TTTCTGTGCCTTTTCTTTGGCTCTA-TCCTTCTGTTC  946

seq1  ATTGGTTTTGTCCTATTCTGAATTGTTCAATCTTACTGTAACTCATAATT  1000
      ||  | ||||||||| |||| |||| |||||| |||||||||||||||||
seq2  AT--GGTTTGTCCTA-TCTG-ATTG-TCAATC-TACTGTAACTCATAATT  990

seq1  CAT  1003
      |||
seq2  CAT  993