BAC Information

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BAC

Clone NameB6Ng01-273I17
Chromosome18 (Build37)
Map Location 54,880,790 - 54,979,954
singlet/doubletdoublet
Overlap geneEG545257
Upstream geneCcdc100, Csnk1g3, EG433184, LOC667360
Downstream geneLOC100042489, Zfp608, LOC100043089, LOC667401
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273I17.bB6Ng01-273I17.g
ACCGA075090GA075091
length7131,131
definitionB6Ng01-273I17.b B6Ng01-273I17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,880,790 - 54,881,502)(54,978,824 - 54,979,954)
sequence
gaattctacccatggctttggggataggaggtgggcgtggggactagggg
gactccctagcaccctgaagggtgagtgtctgaagacaaaatgaggaaga
ctaatacttagcatgtgatactggggagccctcctccttgtccctcacta
gaataaaaaaaaaaaaaaaaaacccacttccttgccaggagccaggaggg
tgtttcttagcaatcacacctctaaatagaatgtaattacgaaggaaatt
aacttcacagccaaagactgcgttgtcatgatgatttagaagatggggaa
gggatgttttctgagcaatctctaatctctctctctctctctctctctct
ctctctctctctctctctctctctttttctcttcctctttcttttaggtt
atcacttaatagtattcattaaaacccataacagaaattggttctcttga
aatttcctactgagtctcgatttactcgagtgagactcttctggaaacaa
tacattagtgtcatgcccaattgacttctgttggaaaaaaaataaatcta
tgtgactatgcagcctggaacgggacatgattaaaaacaagcgcccggtc
agtaccgtgtttagagaactgcctatatttccataggcctctgtctctga
gcagcctatagagtgggctggtgcagattggttcctggggttctttctga
gagacccaatcag
gaattccaagcaatgaagtcagcttcagaatcaccttttttctttatgtc
cctcattagctgagggtcacactaggactgggagcttggcttgaccattg
ggctaggttggttgaccaggaaacacatcttctcccagcacggggtctac
aaacacctgtgtacctgcctttttacttggctgctgaaatcattgaactc
atgtccttatgcttgaaagatagggactttaacagtcatttcccggaccc
tggaattattttggcttgaaggctatccaagctactttttaatgtaattt
ctcctcacgaacacctgatgtttgtttgtttgttatttttaaagaaaaga
ctctcctacatgtatcctcatgaactgttttgctcaagcctctctcctgg
tccatgctcaccaggtcaaaacatttcttccaaatactgttttgatggga
gttcttccaacatacctggcccatgatctcatggggctctgctgcctctg
cggcccttttcacatctaaaaccggacagaccatcctgtaaaatgggctt
gcccctggattgaggttagctgtgttataacttccgtgctctggatttat
cccttctcttgtacggatagtaatcaaatgattgtgctaattgtgccaac
aatggtgacgtctaattcccaagtgtcccgtattctaggcagcttacaag
gcgcgatctgttgcatctgagattgtttttttcctaagggtctgacacaa
tgggtactatggtgatgcttgaggtgtagattaaattccttgcttggatt
tgagaagagagctcatatgcaactcttgagtggccctggtgtctagacta
caaccagtttgctcacctcattgggatcgtagagaatatgaaatgtttat
ccatgcaaaaccatttactttaaaagaaacagaattagttgttttaagat
ctttacaagtaaatagtatcaaaattgaagtgtaataaaataaataagcc
acttatcttccctcatgattttttttttaataagtctccactatgtagcc
cagggagactggttttttctgctgtgctcagatgccatgacagcaactct
ttatagaacacattaaatggggctggcttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_54880790_54881502
seq2: B6Ng01-273I17.b_47_759

seq1  GAATTCTACCCATGGCTTTGGGGATAGGAGGTGGGCGTGGGGACTAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCCATGGCTTTGGGGATAGGAGGTGGGCGTGGGGACTAGGGG  50

seq1  GACTCCCTAGCACCCTGAAGGGTGAGTGTCTGAAGACAAAATGAGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCTAGCACCCTGAAGGGTGAGTGTCTGAAGACAAAATGAGGAAGA  100

seq1  CTAATACTTAGCATGTGATACTGGGGAGCCCTCCTCCTTGTCCCTCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACTTAGCATGTGATACTGGGGAGCCCTCCTCCTTGTCCCTCACTA  150

seq1  GAATAAAAAAAAAAAAAAAAAACCCACTTCCTTGCCAGGAGCCAGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAAAAAAAAAAAAAAACCCACTTCCTTGCCAGGAGCCAGGAGGG  200

seq1  TGTTTCTTAGCAATCACACCTCTAAATAGAATGTAATTACGAAGGAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTAGCAATCACACCTCTAAATAGAATGTAATTACGAAGGAAATT  250

seq1  AACTTCACAGCCAAAGACTGCGTTGTCATGATGATTTAGAAGATGGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACAGCCAAAGACTGCGTTGTCATGATGATTTAGAAGATGGGGAA  300

seq1  GGGATGTTTTCTGAGCAATCTCTAATCTCTCTCTCTCTCTCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTTTCTGAGCAATCTCTAATCTCTCTCTCTCTCTCTCTCTCTCT  350

seq1  CTCTCTCTCTCTCTCTCTCTCTCCTCTTCTCTTCTTCTTTCTTTTTGGTT  400
      ||||||||||||||||||||||| | |||||||| |||||||||| ||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTTTTTCTCTTCCTCTTTCTTTTAGGTT  400

seq1  ATCACTTAATAGTATTCATTAAAACCCATAACAGAAATTGCTTCTCTTTA  450
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  ATCACTTAATAGTATTCATTAAAACCCATAACAGAAATTGGTTCTCTTGA  450

seq1  AATTTCCTACTGAGTCTCGATTTAGTTGAGTGAGACTCTTCTTGAAACAA  500
      |||||||||||||||||||||||| | ||||||||||||||| |||||||
seq2  AATTTCCTACTGAGTCTCGATTTACTCGAGTGAGACTCTTCTGGAAACAA  500

seq1  TACATTAGTGTCATGCCCAATTGACTTCTGTTGTAAAAGAAATAAATCTA  550
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  TACATTAGTGTCATGCCCAATTGACTTCTGTTGGAAAAAAAATAAATCTA  550

seq1  TGTGACTATGCAGCCTGCATCTGGACATGATTAAAAACAAGCGCCCGGTC  600
      ||||||||||||||||| | | ||||||||||||||||||||||||||||
seq2  TGTGACTATGCAGCCTGGAACGGGACATGATTAAAAACAAGCGCCCGGTC  600

seq1  AGTACCCTGTTTAAAGAACAGCCTAGATTTCCATATGCCTCTGCCTCTGA  650
      |||||| |||||| ||||| ||||| ||||||||| ||||||| ||||||
seq2  AGTACCGTGTTTAGAGAACTGCCTATATTTCCATAGGCCTCTGTCTCTGA  650

seq1  GCAGCCTCCCCTGTGGTCTGTTGCAGATTGGTTCATGGGGTTCTTTCTGA  700
      |||||||     |||| ||| ||||||||||||| |||||||||||||||
seq2  GCAGCCTATAGAGTGGGCTGGTGCAGATTGGTTCCTGGGGTTCTTTCTGA  700

seq1  GAGAGCCAAGCAG  713
      |||| |||| |||
seq2  GAGACCCAATCAG  713

seq1: chr18_54978824_54979954
seq2: B6Ng01-273I17.g_65_1195 (reverse)

seq1  GTAAGCCAGCCCCAATTAAATGTTGTTCTTATAAGAGTTGCCTTGGTCAT  50
      ||||||||||||| ||| |||| ||||||   |||||||||    |||||
seq2  GTAAGCCAGCCCC-ATTTAATG-TGTTCTATAAAGAGTTGC---TGTCAT  45

seq1  GGCATCTGTGCACAGCAG-AAAAACCAGTCTCCCTGGGCTACATAGT-GA  98
      |||||||| ||||||||| |||||||||||||||||||||||||||| ||
seq2  GGCATCTGAGCACAGCAGAAAAAACCAGTCTCCCTGGGCTACATAGTGGA  95

seq1  GAC-TATT-AAAAAAAAATCATGAGGGAAGATAAGTGGCTTATTTA-TTT  145
      ||| |||| ||||||||||||||||||||||||||||||||||||| |||
seq2  GACTTATTAAAAAAAAAATCATGAGGGAAGATAAGTGGCTTATTTATTTT  145

seq1  ATTACACTTCAATTTTTTGATACTATTTACTTGTAAAGATCTTTAAACAA  195
      ||||||||||||  ||||||||||||||||||||||||||||| ||||||
seq2  ATTACACTTCAA--TTTTGATACTATTTACTTGTAAAGATCTTAAAACAA  193

seq1  CTAATTCTGTTTCTTTTAAAGTAATTGTTTTTGCATGGATAAACATTTCA  245
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  CTAATTCTGTTTCTTTTAAAGTAAATGGTTTTGCATGGATAAACATTTCA  243

seq1  TATTCTCTACGAT-CCAATGAGGTGAGCAAACTGGTTGTAGTCTAGACAC  294
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTACGATCCCAATGAGGTGAGCAAACTGGTTGTAGTCTAGACAC  293

seq1  CAGGGCCACTC-AGAGTTGCATATGAGCTCTCTTCTCAAATCCAAGCAAG  343
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCACTCAAGAGTTGCATATGAGCTCTCTTCTCAAATCCAAGCAAG  343

seq1  GAATTTAATCTACACCTCAAGCATCACCATAGTACCCATTGTGTCAGACC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATCTACACCTCAAGCATCACCATAGTACCCATTGTGTCAGACC  393

seq1  CTTAGGAAAAAAACAATCTCAGATGCAACAGATCGCGCCTTGTAAGCTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAAAAAAACAATCTCAGATGCAACAGATCGCGCCTTGTAAGCTGC  443

seq1  CTAGAATACGGGACACTTGGGAATTAGACGTCACCATTGTTGGCACAATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATACGGGACACTTGGGAATTAGACGTCACCATTGTTGGCACAATT  493

seq1  AGCACAATCATTTGATTACTATCCGTACAAGAGAAGGGATAAATCCAGAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATCATTTGATTACTATCCGTACAAGAGAAGGGATAAATCCAGAG  543

seq1  CACGGAAGTTATAACACAGCTAACCTCAATCCAGGGGCAAGCCCATTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGAAGTTATAACACAGCTAACCTCAATCCAGGGGCAAGCCCATTTTA  593

seq1  CAGGATGGTCTGTCCGGTTTTAGATGTGAAAAGGGCCGCAGAGGCAGCAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGGTCTGTCCGGTTTTAGATGTGAAAAGGGCCGCAGAGGCAGCAG  643

seq1  AGCCCCATGAGATCATGGGCCAGGTATGTTGGAAGAACTCCCATCAAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCATGAGATCATGGGCCAGGTATGTTGGAAGAACTCCCATCAAAAC  693

seq1  AGTATTTGGAAGAAATGTTTTGACCTGGTGAGCATGGACCAGGAGAGAGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGAAGAAATGTTTTGACCTGGTGAGCATGGACCAGGAGAGAGG  743

seq1  CTTGAGCAAAACAGTTCATGAGGATACATGTAGGAGAGTCTTTTCTTTAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCAAAACAGTTCATGAGGATACATGTAGGAGAGTCTTTTCTTTAA  793

seq1  AAATAACAAACAAACAAACATCAGGTGTTCGTGAGGAGAAATTACATTAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAAACAAACAAACATCAGGTGTTCGTGAGGAGAAATTACATTAA  843

seq1  AAAGTAGCTTGGATAGCCTTCAAGCCAAAATAATTCCAGGGTCCGGGAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCTTGGATAGCCTTCAAGCCAAAATAATTCCAGGGTCCGGGAAA  893

seq1  TGACTGTTAAAGTCCCTATCTTTCAAGCATAAGGACATGAGTTCAATGAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTAAAGTCCCTATCTTTCAAGCATAAGGACATGAGTTCAATGAT  943

seq1  TTCAGCAGCCAAGTAAAAAGGCAGGTACACAGGTGTTTGTAGACCCCGTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAGCCAAGTAAAAAGGCAGGTACACAGGTGTTTGTAGACCCCGTG  993

seq1  CTGGGAGAAGATGTGTTTCCTGGTCAACCAACCTAGCCCAATGGTCAAGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGAAGATGTGTTTCCTGGTCAACCAACCTAGCCCAATGGTCAAGC  1043

seq1  CAAGCTCCCAGTCCTAGTGTGACCCTCAGCTAATGAGGGACATAAAGAAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCCCAGTCCTAGTGTGACCCTCAGCTAATGAGGGACATAAAGAAA  1093

seq1  AAAGGTGATTCTGAAGCTGACTTCATTGCTTGGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGATTCTGAAGCTGACTTCATTGCTTGGAATTC  1131