BAC Information

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BAC

Clone NameB6Ng01-274H16
Chromosome18 (Build37)
Map Location 23,280,556 - 23,281,651
singlet/doubletsinglet
Overlap geneLOC100040579
Upstream gene4921528I01Rik, LOC546708, LOC100040547, Asxl3, Nol4
Downstream geneLOC665797, Dtna, Mapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274H16.bB6Ng01-274H16.g
ACCGA075770GA075771
length1,0911,179
definitionB6Ng01-274H16.b B6Ng01-274H16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaagcctctgttatagttattatatccatttactcccgagaac
gaaaacacctagataaagatgtaaaaacctaactacagcaaacaaagaga
tagctcagcagtaagaggtcaagacgatgctgacacatgaactgagagaa
gttcctaacactcaaatcatcttactcataattatctataactccaacta
cagggtgatcagaaatctctgccctccatgggcacctatgctcacatcca
cataaccccaccctcccacacactcctacacataattaaatataaaacaa
atctgaaagaaaaaaacctactagaagtctagtccctagctaatggtagg
caagacatttaaaccatcttcaaagtctgggcactttccatgacagtcct
taggtctttatgcatagtgttttctgtgaataaagtaatacacattgaaa
gtcatccttttgaaacataaaagaacttaaagccgggtggtggtggcgca
tgtctttaatcccagcactcaggaggcagaggcaggtggatttctgagtt
tgaggccagcctggtctacaaagtgagttccaggacagccagggctatac
agagaaaccctgtctcaccaccttccctcaaaaaaaaaaaaagagagaga
gagagagagagagagagaacttaaatgaaacttttttccaagaagctagg
gtgatagcatgttacatgactgctcgtgctctctgatgctcaaacgcgtg
ctcctgtgtggaaatgcgcaaacctttggctactgagccaaaggagcaga
tgctgggctctcaggaaccatcaaccttgctgcgttctgttacatggtga
gcgctttgctaggcactgtggatacaaagatagatcacacacaattcagg
tcctgggccagggaggaaatagacttaactttccagcatctgttccattt
gcttcctaagtgagaagaaggaaattagaaaggttagcgtgcctgtgtat
gtggggatgatgtgaaaatcagggttccaggtaaggaaatctcactgcta
ccccatcatgatcagaagaacttgtttcttttttaattgga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtattcactgataagtggatactaacccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
gggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaggagctaggagaagtacccaaggagcttaaagggatcttcaccct
ataggtggacacattatgaactaccagtaccctgagctctgactctagct
gcatattgtatcaaaggattgctagtcgcatcactggaaaggaagtccat
gacacgcagaccttgtggtgccgtacagggaatgcaaggccaggggggaa
tgtggtcttggctaagagcaatccgcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23280556_23281651
seq2: B6Ng01-274H16.b_42_1132 (reverse)

seq1  TCCAATTCAAATAAAAAGAAACAAGT--CTCTGATCATGAATGGGGTAGC  48
      |||||||     ||||||||||||||   |||||||||| ||||||||||
seq2  TCCAATT----AAAAAAGAAACAAGTTCTTCTGATCATG-ATGGGGTAGC  45

seq1  AGTGAGATTTTCCTTACCTGGAACCCTTGATTTTCACATCATCCCCACAT  98
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  AGTGAGA-TTTCCTTACCTGGAACCC-TGATTTTCACATCATCCCCACAT  93

seq1  ACACAGGGCACGCTAACC-TTCTAATTTCCTTC-TCTCACTTAGGAAAGC  146
      ||||| |||||||||||| |||||||||||||| ||||||||||| ||||
seq2  ACACA-GGCACGCTAACCTTTCTAATTTCCTTCTTCTCACTTAGG-AAGC  141

seq1  AAATGGAACAGATGCTGGAAAGTTAAGTCTATTTCCTCCCTGGCCCAGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAACAGATGCTGGAAAGTTAAGTCTATTTCCTCCCTGGCCCAGGA  191

seq1  CCTGAATTGTGTGTGATCTATCTTTGTATCCACAGTGCCTAGCAAAGCGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTGTGTGTGATCTATCTTTGTATCCACAGTGCCTAGCAAAGCGC  241

seq1  TCACCATGTAACAGAACGCAGCAAGGTTGATGGTTCCTGAGAGCCCAGCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGTAACAGAACGCAGCAAGGTTGATGGTTCCTGAGAGCCCAGCA  291

seq1  TCTGCTCCTTTGGCTCAGTAGCCAAAGGTTTGCGCATTTCCACACAGGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCTTTGGCTCAGTAGCCAAAGGTTTGCGCATTTCCACACAGGAG  341

seq1  CACGCGTTTGAGCATCAGAGAGCACGAGCAGTCATGTAACATGCTATCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCGTTTGAGCATCAGAGAGCACGAGCAGTCATGTAACATGCTATCAC  391

seq1  CCTAGCTTCTTGGAAAAAAGTTTCATTTAAGTTCTCTCTCTCTCTCTCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTCTTGGAAAAAAGTTTCATTTAAGTTCTCTCTCTCTCTCTCTC  441

seq1  TCTCTCTCTTTTTTTTTTTTTGAGGGAAGGTGGTGAGACAGGGTTTCTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTTTTTTTTTTTTTGAGGGAAGGTGGTGAGACAGGGTTTCTCT  491

seq1  GTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCA  541

seq1  AACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGACA  591

seq1  TGCGCCACCACCACCCGGCTTTAAGTTCTTTTATGTTTCAAAAGGATGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCACCACCACCCGGCTTTAAGTTCTTTTATGTTTCAAAAGGATGAC  641

seq1  TTTCAATGTGTATTACTTTATTCACAGAAAACACTATGCATAAAGACCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGTGTATTACTTTATTCACAGAAAACACTATGCATAAAGACCTA  691

seq1  AGGACTGTCATGGAAAGTGCCCAGACTTTGAAGATGGTTTAAATGTCTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGTCATGGAAAGTGCCCAGACTTTGAAGATGGTTTAAATGTCTTG  741

seq1  CCTACCATTAGCTAGGGACTAGACTTCTAGTAGGTTTTTTTCTTTCAGAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCATTAGCTAGGGACTAGACTTCTAGTAGGTTTTTTTCTTTCAGAT  791

seq1  TTGTTTTATATTTAATTATGTGTAGGAGTGTGTGGGAGGGTGGGGTTATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATATTTAATTATGTGTAGGAGTGTGTGGGAGGGTGGGGTTATG  841

seq1  TGGATGTGAGCATAGGTGCCCATGGAGGGCAGAGATTTCTGATCACCCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTGAGCATAGGTGCCCATGGAGGGCAGAGATTTCTGATCACCCTG  891

seq1  TAGTTGGAGTTATAGATAATTATGAGTAAGATGATTTGAGTGTTAGGAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGAGTTATAGATAATTATGAGTAAGATGATTTGAGTGTTAGGAAC  941

seq1  TTCTCTCAGTTCATGTGTCAGCATCGTCTTGACCTCTTACTGCTGAGCTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAGTTCATGTGTCAGCATCGTCTTGACCTCTTACTGCTGAGCTA  991

seq1  TCTCTTTGTTTGCTGTAGTTAGGTTTTTACATCTTTATCTAGGTGTTTTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTTTGCTGTAGTTAGGTTTTTACATCTTTATCTAGGTGTTTTC  1041

seq1  GTTCTCGGGAGTAAATGGATATAATAACTATAACAGAGGCTTTGGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCGGGAGTAAATGGATATAATAACTATAACAGAGGCTTTGGAATTC  1091